RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CCDC39Q9UFE4 941 aa5.51□□□□□ -1.53
SRP54-204ENST00000553923 ZNF777Q9ULD5 760 aaPredicted RBP5.51□□□□□ -1.53
SRP54-204ENST00000553923 PDE2AO00408 941 aaPredicted RBP5.5□□□□□ -1.53
SRP54-204ENST00000553923 SOX1O00570 391 aaPredicted RBP5.5□□□□□ -1.53
SRP54-204ENST00000553923 DLGAP3O95886 979 aa5.5□□□□□ -1.53
SRP54-204ENST00000553923 FOSL1P15407 271 aa5.5□□□□□ -1.53
SRP54-204ENST00000553923 CABP4P57796 275 aa5.5□□□□□ -1.53
SRP54-204ENST00000553923 OGFOD2Q6N063 350 aa5.5□□□□□ -1.53
SRP54-204ENST00000553923 FDX2Q6P4F2 183 aa5.5□□□□□ -1.53
SRP54-204ENST00000553923 TMEM102Q8N9M5 508 aaPredicted RBP5.5□□□□□ -1.53
SRP54-204ENST00000553923 SMG8Q8ND04 991 aaKnown RBP5.5□□□□□ -1.53
SRP54-204ENST00000553923 CPSF6Q16630 551 aaKnown RBP eCLIP5.49□□□□□ -1.53
SRP54-204ENST00000553923 TMEM164Q5U3C3 297 aa5.49□□□□□ -1.53
SRP54-204ENST00000553923 ZNF438Q7Z4V0 828 aa5.49□□□□□ -1.53
SRP54-204ENST00000553923 VN1R5Q7Z5H4 357 aa5.49□□□□□ -1.53
SRP54-204ENST00000553923 ATCAYQ86WG3 371 aa5.49□□□□□ -1.53
SRP54-204ENST00000553923 SLC7A3Q8WY07 619 aa5.49□□□□□ -1.53
SRP54-204ENST00000553923 CLP1Q92989 425 aaKnown RBP5.49□□□□□ -1.53
SRP54-204ENST00000553923 NXPE3Q969Y0 559 aa5.49□□□□□ -1.53
SRP54-204ENST00000553923 GGNBP2Q9H3C7 697 aa5.49□□□□□ -1.53
SRP54-204ENST00000553923 LEMD3Q9Y2U8 911 aa5.49□□□□□ -1.53
SRP54-204ENST00000553923 ATG7O95352 703 aa5.48□□□□□ -1.53
SRP54-204ENST00000553923 ITGB5P18084 799 aa5.48□□□□□ -1.53
SRP54-204ENST00000553923 C19orf57Q0VDD7 668 aa5.48□□□□□ -1.53
SRP54-204ENST00000553923 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
SRP54-204ENST00000553923 LOC100289279A0A1B0GTE1 492 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 FAM177BA6PVY3 158 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 GAS2O43903 313 aaKnown RBP5.47□□□□□ -1.53
SRP54-204ENST00000553923 CES1P23141 567 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 ADMP35318 185 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 ARL4DP49703 201 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 CDPF1Q6NVV7 123 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 FBXL6Q8N531 539 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 POU5F2Q8N7G0 328 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 EZH1Q92800 747 aaPredicted RBP5.47□□□□□ -1.53
SRP54-204ENST00000553923 GATA6Q92908 595 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 SOX17Q9H6I2 414 aaPredicted RBP5.47□□□□□ -1.53
SRP54-204ENST00000553923 ATG3Q9NT62 314 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 SEPT3Q9UH03 358 aa5.47□□□□□ -1.53
SRP54-204ENST00000553923 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.46□□□□□ -1.54
SRP54-204ENST00000553923 A6NHS1 94 aa5.46□□□□□ -1.54
SRP54-204ENST00000553923 EXOSC6Q5RKV6 272 aaKnown RBP5.46□□□□□ -1.54
SRP54-204ENST00000553923 NUTM2GQ5VZR2 741 aa5.46□□□□□ -1.54
SRP54-204ENST00000553923 C12orf50Q8NA57 414 aaPredicted RBP5.46□□□□□ -1.54
SRP54-204ENST00000553923 C2CD4AQ8NCU7 369 aaPredicted RBP5.46□□□□□ -1.54
SRP54-204ENST00000553923 GIMAP7Q8NHV1 300 aa5.46□□□□□ -1.54
SRP54-204ENST00000553923 BSNDQ8WZ55 320 aa5.46□□□□□ -1.54
SRP54-204ENST00000553923 OSBPL1AQ9BXW6 950 aa5.46□□□□□ -1.54
SRP54-204ENST00000553923 FAM95CA0A1B0GW59 222 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 PDGFAP04085 211 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 RPLP1P05386 114 aaKnown RBP5.45□□□□□ -1.54
SRP54-204ENST00000553923 C8AP07357 584 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 DRD2P14416 443 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 NFKBIBQ15653 356 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 TMEM132AQ24JP5 1023 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 ZAR1Q86SH2 424 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 VSIG10LQ86VR7 867 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 FBLIM1Q8WUP2 373 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 EDEM1Q92611 657 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 PMEPA1Q969W9 287 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 FBXL18Q96ME1 805 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 OSMRQ99650 979 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 ZKSCAN3Q9BRR0 538 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 NRSN2Q9GZP1 204 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 CYP4F12Q9HCS2 524 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 PRKAG2Q9UGJ0 569 aa5.45□□□□□ -1.54
SRP54-204ENST00000553923 ANGEL1Q9UNK9 670 aaKnown RBP5.45□□□□□ -1.54
SRP54-204ENST00000553923 RXRBP28702 533 aa5.44□□□□□ -1.54
SRP54-204ENST00000553923 IKBKEQ14164 716 aa5.44□□□□□ -1.54
SRP54-204ENST00000553923 PAOXQ6QHF9 649 aa5.44□□□□□ -1.54
SRP54-204ENST00000553923 METTL22Q9BUU2 404 aaPredicted RBP5.44□□□□□ -1.54
SRP54-204ENST00000553923 BHLHE41Q9C0J9 482 aaPredicted RBP5.44□□□□□ -1.54
SRP54-204ENST00000553923 EREGO14944 169 aa5.43□□□□□ -1.54
SRP54-204ENST00000553923 ESRRAP11474 423 aaPredicted RBP5.43□□□□□ -1.54
SRP54-204ENST00000553923 SOX4Q06945 474 aaPredicted RBP5.43□□□□□ -1.54
SRP54-204ENST00000553923 PEAR1Q5VY43 1037 aaPredicted RBP5.43□□□□□ -1.54
SRP54-204ENST00000553923 WFDC3Q8IUB2 231 aa5.43□□□□□ -1.54
SRP54-204ENST00000553923 ASIC4Q96FT7 647 aa5.43□□□□□ -1.54
SRP54-204ENST00000553923 PAK6Q9NQU5 681 aaPredicted RBP5.43□□□□□ -1.54
SRP54-204ENST00000553923 BSDC1Q9NW68 430 aaPredicted RBP5.43□□□□□ -1.54
SRP54-204ENST00000553923 FAM170BA6NMN3 283 aa5.42□□□□□ -1.54
SRP54-204ENST00000553923 CYP26A1O43174 497 aa5.42□□□□□ -1.54
SRP54-204ENST00000553923 JUNBP17275 347 aaPredicted RBP5.42□□□□□ -1.54
SRP54-204ENST00000553923 MZF1P28698 734 aaPredicted RBP5.42□□□□□ -1.54
SRP54-204ENST00000553923 DNM1Q05193 864 aaKnown RBP5.42□□□□□ -1.54
SRP54-204ENST00000553923 NOM1Q5C9Z4 860 aaKnown RBP5.42□□□□□ -1.54
SRP54-204ENST00000553923 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
SRP54-204ENST00000553923 TP53INP2Q8IXH6 220 aa5.42□□□□□ -1.54
SRP54-204ENST00000553923 HELQQ8TDG4 1101 aa5.42□□□□□ -1.54
SRP54-204ENST00000553923 USP26Q9BXU7 913 aa5.42□□□□□ -1.54
SRP54-204ENST00000553923 CTSBP07858 339 aa5.41□□□□□ -1.54
SRP54-204ENST00000553923 USP11P51784 963 aa5.41□□□□□ -1.54
SRP54-204ENST00000553923 C8orf34Q49A92 452 aa5.41□□□□□ -1.54
SRP54-204ENST00000553923 TBC1D32Q96NH3 1257 aa5.41□□□□□ -1.54
SRP54-204ENST00000553923 ZC3H7BQ9UGR2 993 aaKnown RBP5.41□□□□□ -1.54
SRP54-204ENST00000553923 TNFRSF21O75509 655 aa5.4□□□□□ -1.54
SRP54-204ENST00000553923 PAPLNO95428 1278 aa5.4□□□□□ -1.54
SRP54-204ENST00000553923 ATP2B4P23634 1241 aa5.4□□□□□ -1.54
SRP54-204ENST00000553923 EIF1AXP47813 144 aaKnown RBP5.4□□□□□ -1.54
SRP54-204ENST00000553923 SEZ6L2Q6UXD5 910 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 1153.4 ms