RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 USP17L4A6NCW7 530 aa16.62■□□□□ 0.25
PSMC6-205ENST00000553899 PHKA1P46020 1223 aa16.62■□□□□ 0.25
PSMC6-205ENST00000553899 C9orf131Q5VYM1 1079 aa16.62■□□□□ 0.25
PSMC6-205ENST00000553899 USP17L1Q7RTZ2 530 aa16.62■□□□□ 0.25
PSMC6-205ENST00000553899 ZGPATQ8N5A5 531 aaKnown RBP16.62■□□□□ 0.25
PSMC6-205ENST00000553899 LNPKQ9C0E8 428 aa16.62■□□□□ 0.25
PSMC6-205ENST00000553899 MYO3BQ8WXR4 1341 aa16.62■□□□□ 0.25
PSMC6-205ENST00000553899 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
PSMC6-205ENST00000553899 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
PSMC6-205ENST00000553899 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
PSMC6-205ENST00000553899 VIL1P09327 827 aaKnown RBP16.61■□□□□ 0.25
PSMC6-205ENST00000553899 PDE1AP54750 535 aa16.61■□□□□ 0.25
PSMC6-205ENST00000553899 EIF6P56537 245 aaKnown RBP16.61■□□□□ 0.25
PSMC6-205ENST00000553899 TTC39AQ5SRH9 613 aa16.61■□□□□ 0.25
PSMC6-205ENST00000553899 GPR101Q96P66 508 aaPredicted RBP16.61■□□□□ 0.25
PSMC6-205ENST00000553899 TLR7Q9NYK1 1049 aaKnown RBP16.61■□□□□ 0.25
PSMC6-205ENST00000553899 RNF181Q9P0P0 153 aa16.61■□□□□ 0.25
PSMC6-205ENST00000553899 ZNF646O15015 1829 aaPredicted RBP16.61■□□□□ 0.25
PSMC6-205ENST00000553899 YDJCA8MPS7 323 aa16.6■□□□□ 0.25
PSMC6-205ENST00000553899 FRAT2O75474 233 aaPredicted RBP16.6■□□□□ 0.25
PSMC6-205ENST00000553899 RPS12P25398 132 aaKnown RBP16.6■□□□□ 0.25
PSMC6-205ENST00000553899 RASGRF1Q13972 1273 aa16.6■□□□□ 0.25
PSMC6-205ENST00000553899 DOK7Q18PE1 504 aa16.6■□□□□ 0.25
PSMC6-205ENST00000553899 TTLL5Q6EMB2 1281 aa16.6■□□□□ 0.25
PSMC6-205ENST00000553899 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
PSMC6-205ENST00000553899 GPC2Q8N158 579 aa16.6■□□□□ 0.25
PSMC6-205ENST00000553899 SPATA5Q8NB90 893 aa16.6■□□□□ 0.25
PSMC6-205ENST00000553899 DBNDD1Q9H9R9 158 aa16.6■□□□□ 0.25
PSMC6-205ENST00000553899 CXCL9Q07325 125 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 TTF1Q15361 905 aaPredicted RBP16.59■□□□□ 0.25
PSMC6-205ENST00000553899 DACT2Q5SW24 774 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 CIAPIN1Q6FI81 312 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 DPY19L2Q6NUT2 758 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
PSMC6-205ENST00000553899 AGBL3Q8NEM8 1001 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 DPF2Q92785 391 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 HAUS7Q99871 368 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 MRIQ9BWK5 157 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 HMG20BQ9P0W2 317 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
PSMC6-205ENST00000553899 MCAMP43121 646 aa16.58■□□□□ 0.24
PSMC6-205ENST00000553899 SPTY2D1Q68D10 685 aaPredicted RBP16.58■□□□□ 0.24
PSMC6-205ENST00000553899 PI4K2BQ8TCG2 481 aa16.58■□□□□ 0.24
PSMC6-205ENST00000553899 GTF2IP78347 998 aa16.57■□□□□ 0.24
PSMC6-205ENST00000553899 GMLQ99445 158 aa16.57■□□□□ 0.24
PSMC6-205ENST00000553899 GLTPD2A6NH11 291 aa16.56■□□□□ 0.24
PSMC6-205ENST00000553899 PDE4AP27815 886 aa16.56■□□□□ 0.24
PSMC6-205ENST00000553899 HDLBPQ00341 1268 aaKnown RBP16.56■□□□□ 0.24
PSMC6-205ENST00000553899 RSBN1LQ6PCB5 846 aaPredicted RBP16.56■□□□□ 0.24
PSMC6-205ENST00000553899 L3MBTL3Q96JM7 780 aaPredicted RBP16.56■□□□□ 0.24
PSMC6-205ENST00000553899 MAST3O60307 1309 aa16.55■□□□□ 0.24
PSMC6-205ENST00000553899 PSMD14O00487 310 aa16.55■□□□□ 0.24
PSMC6-205ENST00000553899 SCARF1Q14162 830 aa16.55■□□□□ 0.24
PSMC6-205ENST00000553899 MFSD14BQ5SR56 506 aa16.55■□□□□ 0.24
PSMC6-205ENST00000553899 OTUD7AQ8TE49 926 aaPredicted RBP16.55■□□□□ 0.24
PSMC6-205ENST00000553899 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
PSMC6-205ENST00000553899 DOCK2Q92608 1830 aa16.54■□□□□ 0.24
PSMC6-205ENST00000553899 RAD17O75943 681 aa16.54■□□□□ 0.24
PSMC6-205ENST00000553899 CYP2E1P05181 493 aaPredicted RBP16.54■□□□□ 0.24
PSMC6-205ENST00000553899 LRRFIP1Q32MZ4 808 aaKnown RBP16.54■□□□□ 0.24
PSMC6-205ENST00000553899 KCNQ5Q9NR82 932 aa16.54■□□□□ 0.24
PSMC6-205ENST00000553899 SCN4AP35499 1836 aa16.54■□□□□ 0.24
PSMC6-205ENST00000553899 SLF2Q8IX21 1173 aa16.53■□□□□ 0.24
PSMC6-205ENST00000553899 FAM163AQ96GL9 167 aaPredicted RBP16.53■□□□□ 0.24
PSMC6-205ENST00000553899 BOLA2Q9H3K6 86 aa16.53■□□□□ 0.24
PSMC6-205ENST00000553899 PAG1Q9NWQ8 432 aa16.53■□□□□ 0.24
PSMC6-205ENST00000553899 IQSEC3Q9UPP2 1182 aaPredicted RBP16.53■□□□□ 0.24
PSMC6-205ENST00000553899 ZNF541Q9H0D2 1346 aa16.52■□□□□ 0.24
PSMC6-205ENST00000553899 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
PSMC6-205ENST00000553899 ZAP70P43403 619 aa16.52■□□□□ 0.24
PSMC6-205ENST00000553899 ZNF280AP59817 542 aaPredicted RBP16.52■□□□□ 0.24
PSMC6-205ENST00000553899 OGFOD1Q8N543 542 aa16.52■□□□□ 0.24
PSMC6-205ENST00000553899 CERS5Q8N5B7 392 aa16.52■□□□□ 0.24
PSMC6-205ENST00000553899 EVI5LQ96CN4 794 aa16.52■□□□□ 0.24
PSMC6-205ENST00000553899 SERPINA10Q9UK55 444 aa16.52■□□□□ 0.24
PSMC6-205ENST00000553899 WDR90Q96KV7 1748 aa16.52■□□□□ 0.24
PSMC6-205ENST00000553899 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 ZFYP08048 801 aaPredicted RBP16.51■□□□□ 0.23
PSMC6-205ENST00000553899 USP17L8P0C7I0 530 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 GSTO1P78417 241 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 MAP3K12Q12852 859 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 CHAF1AQ13111 956 aaPredicted RBP16.51■□□□□ 0.23
PSMC6-205ENST00000553899 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 TTC22Q5TAA0 569 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 ZSCAN25Q6NSZ9 544 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 ERICH6Q7L0X2 663 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 CERS3Q8IU89 383 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 KBTBD3Q8NAB2 608 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 MTMR14Q8NCE2 650 aa16.51■□□□□ 0.23
PSMC6-205ENST00000553899 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.239e-8■■□□□ 11.6
PSMC6-205ENST00000553899 IQCA1LA6NCM1 817 aa16.5■□□□□ 0.23
PSMC6-205ENST00000553899 MAP4K4O95819 1239 aaPredicted RBP16.5■□□□□ 0.23
PSMC6-205ENST00000553899 HHIPL2Q6UWX4 724 aa16.5■□□□□ 0.23
PSMC6-205ENST00000553899 PI16Q6UXB8 463 aa16.5■□□□□ 0.23
PSMC6-205ENST00000553899 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
PSMC6-205ENST00000553899 LRP2BPQ9P2M1 347 aa16.5■□□□□ 0.23
PSMC6-205ENST00000553899 HDAC9Q9UKV0 1011 aa16.5■□□□□ 0.23
PSMC6-205ENST00000553899 MAST2Q6P0Q8 1798 aa16.5■□□□□ 0.23
PSMC6-205ENST00000553899 MYH7P12883 1935 aa16.49■□□□□ 0.23
PSMC6-205ENST00000553899 GOLIM4O00461 696 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms