RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 VPS37DQ86XT2 251 aa25.32■■□□□ 1.64
FOXA1-203ENST00000553751 KLRG1Q96E93 195 aa25.32■■□□□ 1.64
FOXA1-203ENST00000553751 GGA3Q9NZ52 723 aa25.32■■□□□ 1.64
FOXA1-203ENST00000553751 TRPM7Q96QT4 1865 aa25.32■■□□□ 1.64
FOXA1-203ENST00000553751 MMP14P50281 582 aa25.31■■□□□ 1.64
FOXA1-203ENST00000553751 BCAMP50895 628 aa25.31■■□□□ 1.64
FOXA1-203ENST00000553751 SCARF1Q14162 830 aa25.31■■□□□ 1.64
FOXA1-203ENST00000553751 ATP2B3Q16720 1220 aa25.31■■□□□ 1.64
FOXA1-203ENST00000553751 YTHDC1Q96MU7 727 aaKnown RBP25.31■■□□□ 1.64
FOXA1-203ENST00000553751 POLA2Q14181 598 aa25.3■■□□□ 1.64
FOXA1-203ENST00000553751 IQSEC3Q9UPP2 1182 aaPredicted RBP25.3■■□□□ 1.64
FOXA1-203ENST00000553751 MVPQ14764 893 aaKnown RBP25.29■■□□□ 1.64
FOXA1-203ENST00000553751 KRT26Q7Z3Y9 468 aa25.29■■□□□ 1.64
FOXA1-203ENST00000553751 USP48Q86UV5 1035 aa25.29■■□□□ 1.64
FOXA1-203ENST00000553751 DCPSQ96C86 337 aaKnown RBP25.29■■□□□ 1.64
FOXA1-203ENST00000553751 HDAC9Q9UKV0 1011 aa25.29■■□□□ 1.64
FOXA1-203ENST00000553751 ATP8B2P98198 1209 aa25.28■■□□□ 1.64
FOXA1-203ENST00000553751 NBPF9Q3BBW0 867 aa25.28■■□□□ 1.64
FOXA1-203ENST00000553751 MFSD14BQ5SR56 506 aa25.28■■□□□ 1.64
FOXA1-203ENST00000553751 ANGEL2Q5VTE6 544 aaKnown RBP25.28■■□□□ 1.64
FOXA1-203ENST00000553751 CST9Q5W186 159 aa25.28■■□□□ 1.64
FOXA1-203ENST00000553751 SSH3Q8TE77 659 aa25.28■■□□□ 1.64
FOXA1-203ENST00000553751 POLR2AP24928 1970 aaKnown RBP25.27■■□□□ 1.64
FOXA1-203ENST00000553751 ADM5C9JUS6 153 aa25.27■■□□□ 1.64
FOXA1-203ENST00000553751 WNT10BO00744 389 aa25.27■■□□□ 1.64
FOXA1-203ENST00000553751 TFCP2Q12800 502 aa25.27■■□□□ 1.64
FOXA1-203ENST00000553751 DLK2Q6UY11 383 aa25.27■■□□□ 1.64
FOXA1-203ENST00000553751 ZBED3Q96IU2 234 aaPredicted RBP25.27■■□□□ 1.64
FOXA1-203ENST00000553751 COG6Q9Y2V7 657 aa25.27■■□□□ 1.64
FOXA1-203ENST00000553751 F8W031 263 aaPredicted RBP25.26■■□□□ 1.63
FOXA1-203ENST00000553751 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.26■■□□□ 1.63
FOXA1-203ENST00000553751 PITPNM2Q9BZ72 1349 aa25.26■■□□□ 1.63
FOXA1-203ENST00000553751 CNTNAP1P78357 1384 aa25.26■■□□□ 1.63
FOXA1-203ENST00000553751 COL1A1P02452 1464 aaPredicted RBP25.26■■□□□ 1.63
FOXA1-203ENST00000553751 CELF2O95319 508 aaKnown RBP25.25■■□□□ 1.63
FOXA1-203ENST00000553751 CHAF1AQ13111 956 aaPredicted RBP25.25■■□□□ 1.63
FOXA1-203ENST00000553751 MKRN1Q9UHC7 482 aaKnown RBP25.25■■□□□ 1.63
FOXA1-203ENST00000553751 DDX19BQ9UMR2 479 aa25.25■■□□□ 1.63
FOXA1-203ENST00000553751 MYH13Q9UKX3 1938 aa25.24■■□□□ 1.63
FOXA1-203ENST00000553751 FRAT2O75474 233 aaPredicted RBP25.24■■□□□ 1.63
FOXA1-203ENST00000553751 C20orf194Q5TEA3 1177 aa25.24■■□□□ 1.63
FOXA1-203ENST00000553751 CEP85Q6P2H3 762 aa25.24■■□□□ 1.63
FOXA1-203ENST00000553751 SULF1Q8IWU6 871 aa25.24■■□□□ 1.63
FOXA1-203ENST00000553751 MTMR14Q8NCE2 650 aa25.24■■□□□ 1.63
FOXA1-203ENST00000553751 ADORA1P30542 326 aa25.23■■□□□ 1.63
FOXA1-203ENST00000553751 G3BP1Q13283 466 aaKnown RBP eCLIP25.23■■□□□ 1.63
FOXA1-203ENST00000553751 JMYQ8N9B5 988 aa25.23■■□□□ 1.63
FOXA1-203ENST00000553751 ABT1Q9ULW3 272 aaKnown RBP25.23■■□□□ 1.63
FOXA1-203ENST00000553751 A0A1B0GUL7 405 aa25.22■■□□□ 1.63
FOXA1-203ENST00000553751 RASSF10A6NK89 507 aa25.22■■□□□ 1.63
FOXA1-203ENST00000553751 PDE3AQ14432 1141 aa25.22■■□□□ 1.63
FOXA1-203ENST00000553751 GRIK5Q16478 980 aa25.22■■□□□ 1.63
FOXA1-203ENST00000553751 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.22■■□□□ 1.63
FOXA1-203ENST00000553751 TBC1D22AQ8WUA7 517 aa25.22■■□□□ 1.63
FOXA1-203ENST00000553751 ZNF408Q9H9D4 720 aa25.22■■□□□ 1.63
FOXA1-203ENST00000553751 AKAP2Q9Y2D5 859 aa25.22■■□□□ 1.63
FOXA1-203ENST00000553751 PCDHAC2Q9Y5I4 1007 aa25.22■■□□□ 1.63
FOXA1-203ENST00000553751 PHKA1P46020 1223 aa25.21■■□□□ 1.63
FOXA1-203ENST00000553751 TIMM10P62072 90 aa25.21■■□□□ 1.63
FOXA1-203ENST00000553751 DLGAP5Q15398 846 aa25.21■■□□□ 1.63
FOXA1-203ENST00000553751 CFAP100Q494V2 611 aa25.21■■□□□ 1.63
FOXA1-203ENST00000553751 ZBTB40Q9NUA8 1239 aa25.21■■□□□ 1.63
FOXA1-203ENST00000553751 TTF2Q9UNY4 1162 aaKnown RBP25.21■■□□□ 1.63
FOXA1-203ENST00000553751 TLL2Q9Y6L7 1015 aa25.21■■□□□ 1.63
FOXA1-203ENST00000553751 SPDYE2BA6NHP3 402 aa25.2■■□□□ 1.62
FOXA1-203ENST00000553751 SPDYE6P0CI01 402 aa25.2■■□□□ 1.62
FOXA1-203ENST00000553751 SCAF8Q9UPN6 1271 aaKnown RBP25.2■■□□□ 1.62
FOXA1-203ENST00000553751 ECM29Q5VYK3 1845 aa25.2■■□□□ 1.62
FOXA1-203ENST00000553751 ZBTB22O15209 634 aa25.19■■□□□ 1.62
FOXA1-203ENST00000553751 CCDC102BQ68D86 513 aa25.19■■□□□ 1.62
FOXA1-203ENST00000553751 CDCA5Q96FF9 252 aa25.19■■□□□ 1.62
FOXA1-203ENST00000553751 NOP58Q9Y2X3 529 aaKnown RBP25.19■■□□□ 1.62
FOXA1-203ENST00000553751 AOX1Q06278 1338 aa25.18■■□□□ 1.62
FOXA1-203ENST00000553751 SURF6O75683 361 aaKnown RBP25.18■■□□□ 1.62
FOXA1-203ENST00000553751 SAPCD2Q86UD0 394 aa25.18■■□□□ 1.62
FOXA1-203ENST00000553751 XAGE2Q96GT9 111 aa25.18■■□□□ 1.62
FOXA1-203ENST00000553751 GNL3LQ9NVN8 582 aaKnown RBP25.18■■□□□ 1.62
FOXA1-203ENST00000553751 SERPINA10Q9UK55 444 aa25.18■■□□□ 1.62
FOXA1-203ENST00000553751 PCNTO95613 3336 aa25.17■■□□□ 1.62
FOXA1-203ENST00000553751 SEMA3EO15041 775 aa25.17■■□□□ 1.62
FOXA1-203ENST00000553751 VEGFBP49765 207 aa25.17■■□□□ 1.62
FOXA1-203ENST00000553751 DEFB115Q30KQ5 88 aa25.17■■□□□ 1.62
FOXA1-203ENST00000553751 PRMT6Q96LA8 375 aaPredicted RBP25.17■■□□□ 1.62
FOXA1-203ENST00000553751 OS9Q13438 667 aaPredicted RBP25.16■■□□□ 1.62
FOXA1-203ENST00000553751 APOBEC3FQ8IUX4 373 aaKnown RBP25.16■■□□□ 1.62
FOXA1-203ENST00000553751 WDR66Q8TBY9 1149 aa25.16■■□□□ 1.62
FOXA1-203ENST00000553751 SUGT1Q9Y2Z0 365 aa25.16■■□□□ 1.62
FOXA1-203ENST00000553751 CRKP46108 304 aa25.15■■□□□ 1.62
FOXA1-203ENST00000553751 RBM5P52756 815 aaKnown RBP eCLIP25.15■■□□□ 1.62
FOXA1-203ENST00000553751 RASGRF1Q13972 1273 aa25.15■■□□□ 1.62
FOXA1-203ENST00000553751 NEUROD6Q96NK8 337 aa25.15■■□□□ 1.62
FOXA1-203ENST00000553751 CHMP4BQ9H444 224 aaKnown RBP25.15■■□□□ 1.62
FOXA1-203ENST00000553751 GBA2Q9HCG7 927 aaPredicted RBP25.15■■□□□ 1.62
FOXA1-203ENST00000553751 GPR108Q9NPR9 543 aa25.15■■□□□ 1.62
FOXA1-203ENST00000553751 DENND2AQ9ULE3 1009 aa25.15■■□□□ 1.62
FOXA1-203ENST00000553751 SALL1Q9NSC2 1324 aa25.13■■□□□ 1.61
FOXA1-203ENST00000553751 THSD7BQ9C0I4 1608 aa25.13■■□□□ 1.61
FOXA1-203ENST00000553751 CLRN2A0PK11 232 aa25.13■■□□□ 1.61
FOXA1-203ENST00000553751 MYO1BO43795 1136 aa25.13■■□□□ 1.61
FOXA1-203ENST00000553751 HDLBPQ00341 1268 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms