RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZKSCAN3Q9BRR0 538 aa7.8□□□□□ -1.16
SCFD1-210ENST00000553693 OSGEPQ9NPF4 335 aa7.8□□□□□ -1.16
SCFD1-210ENST00000553693 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-210ENST00000553693 GLB1P16278 677 aa7.79□□□□□ -1.16
SCFD1-210ENST00000553693 ARL4DP49703 201 aa7.79□□□□□ -1.16
SCFD1-210ENST00000553693 ADAMTSL4Q6UY14 1074 aa7.79□□□□□ -1.16
SCFD1-210ENST00000553693 ACAD11Q709F0 780 aa7.79□□□□□ -1.16
SCFD1-210ENST00000553693 BSNDQ8WZ55 320 aa7.79□□□□□ -1.16
SCFD1-210ENST00000553693 CEP41Q9BYV8 373 aa7.79□□□□□ -1.16
SCFD1-210ENST00000553693 SOX13Q9UN79 622 aa7.79□□□□□ -1.16
SCFD1-210ENST00000553693 ALX3O95076 343 aa7.78□□□□□ -1.16
SCFD1-210ENST00000553693 ARHGAP4P98171 946 aa7.78□□□□□ -1.16
SCFD1-210ENST00000553693 DUOXA2Q1HG44 320 aa7.78□□□□□ -1.16
SCFD1-210ENST00000553693 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
SCFD1-210ENST00000553693 HHIPQ96QV1 700 aa7.78□□□□□ -1.16
SCFD1-210ENST00000553693 CITED4Q96RK1 184 aa7.78□□□□□ -1.16
SCFD1-210ENST00000553693 BHLHE41Q9C0J9 482 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-210ENST00000553693 ZFYVE28Q9HCC9 887 aa7.78□□□□□ -1.16
SCFD1-210ENST00000553693 TRPA1O75762 1119 aa7.77□□□□□ -1.17
SCFD1-210ENST00000553693 WISP1O95388 367 aa7.77□□□□□ -1.17
SCFD1-210ENST00000553693 AGGF1Q8N302 714 aaeCLIP7.77□□□□□ -1.17
SCFD1-210ENST00000553693 KRTAP17-1Q9BYP8 105 aa7.77□□□□□ -1.17
SCFD1-210ENST00000553693 OAS3Q9Y6K5 1087 aaKnown RBP7.77□□□□□ -1.17
SCFD1-210ENST00000553693 TM4SF5O14894 197 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-210ENST00000553693 JAG1P78504 1218 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 C19orf57Q0VDD7 668 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 IKBKEQ14164 716 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 ECM1Q16610 540 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 UVSSAQ2YD98 709 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 PRR23CQ6ZRP0 262 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 ASAP3Q8TDY4 903 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 FOXD4L4Q8WXT5 416 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-210ENST00000553693 SLC7A3Q8WY07 619 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 KLHDC7BQ96G42 594 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 KCNK4Q9NYG8 393 aa7.76□□□□□ -1.17
SCFD1-210ENST00000553693 SSTR4P31391 388 aa7.75□□□□□ -1.17
SCFD1-210ENST00000553693 CD97P48960 835 aa7.75□□□□□ -1.17
SCFD1-210ENST00000553693 LCE4AQ5TA78 99 aa7.75□□□□□ -1.17
SCFD1-210ENST00000553693 PEAR1Q5VY43 1037 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-210ENST00000553693 UBASH3BQ8TF42 649 aa7.75□□□□□ -1.17
SCFD1-210ENST00000553693 FAM129BQ96TA1 746 aa7.75□□□□□ -1.17
SCFD1-210ENST00000553693 LATS2Q9NRM7 1088 aa7.75□□□□□ -1.17
SCFD1-210ENST00000553693 ADAM11O75078 769 aa7.74□□□□□ -1.17
SCFD1-210ENST00000553693 BRD1O95696 1058 aa7.74□□□□□ -1.17
SCFD1-210ENST00000553693 POLR3DP05423 398 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-210ENST00000553693 KIAA1211Q6ZU35 1233 aa7.74□□□□□ -1.17
SCFD1-210ENST00000553693 GALNT12Q8IXK2 581 aa7.74□□□□□ -1.17
SCFD1-210ENST00000553693 KRTAP4-5Q9BYR2 181 aa7.74□□□□□ -1.17
SCFD1-210ENST00000553693 SOX17Q9H6I2 414 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-210ENST00000553693 DDX3YO15523 660 aaKnown RBP7.73□□□□□ -1.17
SCFD1-210ENST00000553693 CPNE3O75131 537 aaKnown RBP7.73□□□□□ -1.17
SCFD1-210ENST00000553693 NLRP12P59046 1061 aa7.73□□□□□ -1.17
SCFD1-210ENST00000553693 ANKRD34AQ69YU3 496 aa7.73□□□□□ -1.17
SCFD1-210ENST00000553693 VN1R5Q7Z5H4 357 aa7.73□□□□□ -1.17
SCFD1-210ENST00000553693 TMC1Q8TDI8 760 aa7.73□□□□□ -1.17
SCFD1-210ENST00000553693 RNF208Q9H0X6 261 aa7.73□□□□□ -1.17
SCFD1-210ENST00000553693 GNEQ9Y223 722 aaKnown RBP7.73□□□□□ -1.17
SCFD1-210ENST00000553693 SOWAHDA6NJG2 315 aa7.72□□□□□ -1.17
SCFD1-210ENST00000553693 DHX15O43143 795 aaKnown RBP7.72□□□□□ -1.17
SCFD1-210ENST00000553693 SLC51AQ86UW1 340 aa7.72□□□□□ -1.17
SCFD1-210ENST00000553693 UTP4Q969X6 686 aaKnown RBP7.72□□□□□ -1.17
SCFD1-210ENST00000553693 DMRTB1Q96MA1 342 aa7.72□□□□□ -1.17
SCFD1-210ENST00000553693 RUSC1Q9BVN2 902 aa7.72□□□□□ -1.17
SCFD1-210ENST00000553693 LIN7BQ9HAP6 207 aa7.72□□□□□ -1.17
SCFD1-210ENST00000553693 A0A1W2PP55 124 aa7.71□□□□□ -1.18
SCFD1-210ENST00000553693 GSC2O15499 205 aa7.71□□□□□ -1.18
SCFD1-210ENST00000553693 CCNJLQ8IV13 435 aa7.71□□□□□ -1.18
SCFD1-210ENST00000553693 UBL7Q96S82 380 aaPredicted RBP7.71□□□□□ -1.18
SCFD1-210ENST00000553693 DNAJC25Q9H1X3 360 aa7.71□□□□□ -1.18
SCFD1-210ENST00000553693 RAXQ9Y2V3 346 aa7.71□□□□□ -1.18
SCFD1-210ENST00000553693 SOX1O00570 391 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-210ENST00000553693 SART1O43290 800 aaKnown RBP7.7□□□□□ -1.18
SCFD1-210ENST00000553693 MED26O95402 600 aa7.7□□□□□ -1.18
SCFD1-210ENST00000553693 ESRRAP11474 423 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-210ENST00000553693 FSTP19883 344 aa7.7□□□□□ -1.18
SCFD1-210ENST00000553693 ORC1Q13415 861 aa7.7□□□□□ -1.18
SCFD1-210ENST00000553693 FDX2Q6P4F2 183 aa7.7□□□□□ -1.18
SCFD1-210ENST00000553693 FAM46AQ96IP4 442 aaKnown RBP7.7□□□□□ -1.18
SCFD1-210ENST00000553693 USP26Q9BXU7 913 aa7.7□□□□□ -1.18
SCFD1-210ENST00000553693 A0A096LPE4 126 aa7.69□□□□□ -1.18
SCFD1-210ENST00000553693 A0A1W2PPZ6 126 aa7.69□□□□□ -1.18
SCFD1-210ENST00000553693 GP2P55259 537 aaKnown RBP7.69□□□□□ -1.18
SCFD1-210ENST00000553693 KIAA0319Q5VV43 1072 aa7.69□□□□□ -1.18
SCFD1-210ENST00000553693 USPL1Q5W0Q7 1092 aa7.69□□□□□ -1.18
SCFD1-210ENST00000553693 ALKBH8Q96BT7 664 aaKnown RBP7.69□□□□□ -1.18
SCFD1-210ENST00000553693 RBCK1Q9BYM8 510 aa7.69□□□□□ -1.18
SCFD1-210ENST00000553693 CLEC4MQ9H2X3 399 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-210ENST00000553693 BIN2Q9UBW5 565 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-210ENST00000553693 MEGF11A6BM72 1044 aa7.68□□□□□ -1.18
SCFD1-210ENST00000553693 METTL12A8MUP2 240 aa7.68□□□□□ -1.18
SCFD1-210ENST00000553693 GPR182O15218 404 aa7.68□□□□□ -1.18
SCFD1-210ENST00000553693 PCDH1Q08174 1060 aa7.68□□□□□ -1.18
SCFD1-210ENST00000553693 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-210ENST00000553693 ARMC10Q8N2F6 343 aa7.68□□□□□ -1.18
SCFD1-210ENST00000553693 DDX54Q8TDD1 881 aaKnown RBP7.68□□□□□ -1.18
SCFD1-210ENST00000553693 MYRFLQ96LU7 910 aa7.68□□□□□ -1.18
SCFD1-210ENST00000553693 TCF12Q99081 682 aa7.68□□□□□ -1.18
SCFD1-210ENST00000553693 EHD4Q9H223 541 aa7.68□□□□□ -1.18
SCFD1-210ENST00000553693 STOML1Q9UBI4 398 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms