RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 CKAP2LQ8IYA6 745 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 NLGN1Q8N2Q7 840 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 ZNF837Q96EG3 531 aaPredicted RBP5.79□□□□□ -1.48
TDP1-207ENST00000553617 GMCL1Q96IK5 515 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 NSUN5Q96P11 429 aaKnown RBP5.79□□□□□ -1.48
TDP1-207ENST00000553617 SEC31BQ9NQW1 1179 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 ATXN7L1Q9ULK2 861 aaPredicted RBP5.79□□□□□ -1.48
TDP1-207ENST00000553617 EFR3BQ9Y2G0 817 aa5.79□□□□□ -1.48
TDP1-207ENST00000553617 A0A096LPE4 126 aa5.78□□□□□ -1.48
TDP1-207ENST00000553617 A0A1W2PPZ6 126 aa5.78□□□□□ -1.48
TDP1-207ENST00000553617 SSBP05455 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
TDP1-207ENST00000553617 TFE3P19532 575 aaPredicted RBP5.78□□□□□ -1.48
TDP1-207ENST00000553617 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
TDP1-207ENST00000553617 GMPRP36959 345 aa5.78□□□□□ -1.48
TDP1-207ENST00000553617 FAM160A1Q05DH4 1040 aa5.78□□□□□ -1.48
TDP1-207ENST00000553617 CAMK2GQ13555 558 aaPredicted RBP5.78□□□□□ -1.48
TDP1-207ENST00000553617 TTBK2Q6IQ55 1244 aa5.78□□□□□ -1.48
TDP1-207ENST00000553617 SLITRK4Q8IW52 837 aa5.78□□□□□ -1.48
TDP1-207ENST00000553617 CCDC155Q8N6L0 562 aa5.78□□□□□ -1.48
TDP1-207ENST00000553617 MKL1Q969V6 931 aa5.78□□□□□ -1.48
TDP1-207ENST00000553617 UBP1Q9NZI7 540 aa5.78□□□□□ -1.48
TDP1-207ENST00000553617 LOC102724428A0A0B4J2F2 783 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 PDE2AO00408 941 aaPredicted RBP5.77□□□□□ -1.49
TDP1-207ENST00000553617 KLF4O43474 513 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 PAGE1O75459 146 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 ETFBP38117 255 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 CRKP46108 304 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 SIK1P57059 783 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 BMS1Q14692 1282 aaKnown RBP5.77□□□□□ -1.49
TDP1-207ENST00000553617 PCNX4Q63HM2 1172 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 SDE2Q6IQ49 451 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 FAM196AQ6ZSG2 479 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 JAZF1Q86VZ6 243 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 TRIM42Q8IWZ5 723 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 LRRC3Q9BY71 257 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 PBX4Q9BYU1 374 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 RASSF4Q9H2L5 321 aa5.77□□□□□ -1.49
TDP1-207ENST00000553617 CDK11AQ9UQ88 783 aaPredicted RBP5.77□□□□□ -1.49
TDP1-207ENST00000553617 FAM181BA6NEQ2 426 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 H3BM21 787 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 FGFR3P22607 806 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 ATP11AP98196 1134 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 NFE2L2Q16236 605 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 SNAP47Q5SQN1 464 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 EGFLAMQ63HQ2 1017 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 ZNF662Q6ZS27 426 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 CCDC84Q86UT8 332 aaPredicted RBP5.76□□□□□ -1.49
TDP1-207ENST00000553617 GOLM1Q8NBJ4 401 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 IRF7Q92985 503 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 SPACA7Q96KW9 195 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 MUC3BQ9H195 1237 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 ROBO2Q9HCK4 1378 aa5.76□□□□□ -1.49
TDP1-207ENST00000553617 ANKRD62A6NC57 917 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 J3QW42 95 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 K7ELQ4 463 aaPredicted RBP5.75□□□□□ -1.49
TDP1-207ENST00000553617 ITGA6P23229 1130 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 APOBRQ0VD83 1088 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 RASIP1Q5U651 963 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 ANKS3Q6ZW76 656 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 ZSCAN1Q8NBB4 408 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 NKD1Q969G9 470 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 GTPBP3Q969Y2 492 aaKnown RBP5.75□□□□□ -1.49
TDP1-207ENST00000553617 SHDQ96IW2 340 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 POP1Q99575 1024 aaKnown RBP5.75□□□□□ -1.49
TDP1-207ENST00000553617 SRRTQ9BXP5 876 aaKnown RBP5.75□□□□□ -1.49
TDP1-207ENST00000553617 SIRPGQ9P1W8 387 aa5.75□□□□□ -1.49
TDP1-207ENST00000553617 FAM221AA4D161 298 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 B3GALT4O96024 378 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 F13A1P00488 732 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 NCLP19338 710 aaKnown RBP5.74□□□□□ -1.49
TDP1-207ENST00000553617 BMP6P22004 513 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 MLLT1Q03111 559 aaPredicted RBP5.74□□□□□ -1.49
TDP1-207ENST00000553617 NEUROD1Q13562 356 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 RAB33AQ14088 237 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 ADAMTSL4Q6UY14 1074 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 ASAP3Q8TDY4 903 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 GATAD2BQ8WXI9 593 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 CLEC4MQ9H2X3 399 aaPredicted RBP5.74□□□□□ -1.49
TDP1-207ENST00000553617 TMEM39AQ9NV64 488 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 DNAJB12Q9NXW2 375 aaKnown RBP5.74□□□□□ -1.49
TDP1-207ENST00000553617 PRKAG3Q9UGI9 489 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 GPN3Q9UHW5 284 aaPredicted RBP5.74□□□□□ -1.49
TDP1-207ENST00000553617 SOX13Q9UN79 622 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 PHF24Q9UPV7 400 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 MRVI1Q9Y6F6 885 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 ERBB4Q15303 1308 aa5.74□□□□□ -1.49
TDP1-207ENST00000553617 SBNO2Q9Y2G9 1366 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 GPR25O00155 361 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 CTBSQ01459 385 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 MPP2Q14168 576 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 RASA3Q14644 834 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 PCSK7Q16549 785 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 ZNF468Q5VIY5 522 aaPredicted RBP5.73□□□□□ -1.49
TDP1-207ENST00000553617 BNC2Q6ZN30 1099 aaPredicted RBP5.73□□□□□ -1.49
TDP1-207ENST00000553617 HFE2Q6ZVN8 426 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 FBXO27Q8NI29 283 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 HNRNPLLQ8WVV9 542 aaKnown RBP5.73□□□□□ -1.49
TDP1-207ENST00000553617 BSNDQ8WZ55 320 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 TNFRSF25Q93038 417 aa5.73□□□□□ -1.49
TDP1-207ENST00000553617 MRFAP1L1Q96HT8 127 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms