RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 PDS5AQ29RF7 1337 aaKnown RBP16.59■□□□□ 0.25
APEX1-205ENST00000553555 ZFYP08048 801 aaPredicted RBP16.59■□□□□ 0.25
APEX1-205ENST00000553555 RBM25P49756 843 aaKnown RBP16.59■□□□□ 0.25
APEX1-205ENST00000553555 TDRD7Q8NHU6 1098 aaKnown RBP16.59■□□□□ 0.25
APEX1-205ENST00000553555 COL1A1P02452 1464 aaPredicted RBP16.58■□□□□ 0.25
APEX1-205ENST00000553555 EPB41L2O43491 1005 aaKnown RBP16.58■□□□□ 0.24
APEX1-205ENST00000553555 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
APEX1-205ENST00000553555 ZMYM1Q5SVZ6 1142 aa16.58■□□□□ 0.24
APEX1-205ENST00000553555 CC2D2BQ6DHV5 1058 aa16.58■□□□□ 0.24
APEX1-205ENST00000553555 ZSCAN25Q6NSZ9 544 aa16.58■□□□□ 0.24
APEX1-205ENST00000553555 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.24
APEX1-205ENST00000553555 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
APEX1-205ENST00000553555 HELLSQ9NRZ9 838 aa16.58■□□□□ 0.24
APEX1-205ENST00000553555 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
APEX1-205ENST00000553555 CCDC88AQ3V6T2 1871 aa16.58■□□□□ 0.24
APEX1-205ENST00000553555 SLFNL1Q499Z3 407 aa16.57■□□□□ 0.24
APEX1-205ENST00000553555 MCMDC2Q4G0Z9 681 aa16.57■□□□□ 0.24
APEX1-205ENST00000553555 LSG1Q9H089 658 aaKnown RBP16.57■□□□□ 0.24
APEX1-205ENST00000553555 CD2APQ9Y5K6 639 aa16.57■□□□□ 0.24
APEX1-205ENST00000553555 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
APEX1-205ENST00000553555 IL1R1P14778 569 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 ADD2P35612 726 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 WASHC4Q2M389 1173 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 KIAA1211Q6ZU35 1233 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 SEC62Q99442 399 aaKnown RBP16.56■□□□□ 0.24
APEX1-205ENST00000553555 CD209Q9NNX6 404 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 PIM2Q9P1W9 311 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 SNED1Q8TER0 1413 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 C21orf2O43822 256 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 MAP3K12Q12852 859 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 SLC9C2Q5TAH2 1124 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 EYA3Q99504 573 aa16.56■□□□□ 0.24
APEX1-205ENST00000553555 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
APEX1-205ENST00000553555 ZC3H12CQ9C0D7 883 aaKnown RBP16.56■□□□□ 0.24
APEX1-205ENST00000553555 RIMBP2O15034 1052 aa16.55■□□□□ 0.24
APEX1-205ENST00000553555 UBE3CQ15386 1083 aa16.55■□□□□ 0.24
APEX1-205ENST00000553555 GRIPAP1Q4V328 841 aa16.55■□□□□ 0.24
APEX1-205ENST00000553555 ZNF589Q86UQ0 364 aaPredicted RBP16.55■□□□□ 0.24
APEX1-205ENST00000553555 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
APEX1-205ENST00000553555 SPON1Q9HCB6 807 aa16.55■□□□□ 0.24
APEX1-205ENST00000553555 WWC3Q9ULE0 1092 aa16.55■□□□□ 0.24
APEX1-205ENST00000553555 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
APEX1-205ENST00000553555 PDE6AP16499 860 aa16.54■□□□□ 0.24
APEX1-205ENST00000553555 PTH1RQ03431 593 aa16.54■□□□□ 0.24
APEX1-205ENST00000553555 CHAF1AQ13111 956 aaPredicted RBP16.54■□□□□ 0.24
APEX1-205ENST00000553555 APPBP2Q92624 585 aa16.54■□□□□ 0.24
APEX1-205ENST00000553555 COA1Q9GZY4 146 aa16.54■□□□□ 0.24
APEX1-205ENST00000553555 LRP2BPQ9P2M1 347 aa16.54■□□□□ 0.24
APEX1-205ENST00000553555 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
APEX1-205ENST00000553555 ABCF2Q9UG63 623 aa16.54■□□□□ 0.24
APEX1-205ENST00000553555 CCDC171Q6TFL3 1326 aa16.53■□□□□ 0.24
APEX1-205ENST00000553555 ANP32AP39687 249 aaKnown RBP16.53■□□□□ 0.24
APEX1-205ENST00000553555 CCDC129Q6ZRS4 1044 aa16.53■□□□□ 0.24
APEX1-205ENST00000553555 MAST3O60307 1309 aa16.53■□□□□ 0.24
APEX1-205ENST00000553555 ZNF532Q9HCE3 1301 aa16.53■□□□□ 0.24
APEX1-205ENST00000553555 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
APEX1-205ENST00000553555 M0R2C6 588 aa16.52■□□□□ 0.24
APEX1-205ENST00000553555 CCDC93Q567U6 631 aa16.52■□□□□ 0.24
APEX1-205ENST00000553555 WDR66Q8TBY9 1149 aa16.52■□□□□ 0.24
APEX1-205ENST00000553555 MAP4K1Q92918 833 aa16.52■□□□□ 0.24
APEX1-205ENST00000553555 PUS7LQ9H0K6 701 aaKnown RBP16.52■□□□□ 0.24
APEX1-205ENST00000553555 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.23
APEX1-205ENST00000553555 RTKN2Q8IZC4 609 aa16.52■□□□□ 0.23
APEX1-205ENST00000553555 KLHL34Q8N239 644 aa16.52■□□□□ 0.23
APEX1-205ENST00000553555 MAGEB6Q8N7X4 407 aa16.52■□□□□ 0.23
APEX1-205ENST00000553555 SUPT20HQ8NEM7 779 aa16.52■□□□□ 0.23
APEX1-205ENST00000553555 KIF2CQ99661 725 aa16.52■□□□□ 0.23
APEX1-205ENST00000553555 RAI14Q9P0K7 980 aa16.52■□□□□ 0.23
APEX1-205ENST00000553555 MCCP23508 829 aa16.51■□□□□ 0.23
APEX1-205ENST00000553555 HSPA4P34932 840 aa16.51■□□□□ 0.23
APEX1-205ENST00000553555 DALRD3Q5D0E6 543 aaKnown RBP16.51■□□□□ 0.23
APEX1-205ENST00000553555 ZGPATQ8N5A5 531 aaKnown RBP16.51■□□□□ 0.23
APEX1-205ENST00000553555 JAG2Q9Y219 1238 aa16.51■□□□□ 0.23
APEX1-205ENST00000553555 FER1L6Q2WGJ9 1857 aa16.51■□□□□ 0.23
APEX1-205ENST00000553555 FAM205AQ6ZU69 1335 aa16.5■□□□□ 0.23
APEX1-205ENST00000553555 MAST2Q6P0Q8 1798 aa16.5■□□□□ 0.23
APEX1-205ENST00000553555 IGSF3O75054 1194 aa16.5■□□□□ 0.23
APEX1-205ENST00000553555 DOK7Q18PE1 504 aa16.5■□□□□ 0.23
APEX1-205ENST00000553555 SOGA3Q5TF21 947 aa16.5■□□□□ 0.23
APEX1-205ENST00000553555 SPTY2D1Q68D10 685 aaPredicted RBP16.5■□□□□ 0.23
APEX1-205ENST00000553555 PSMD1Q99460 953 aa16.5■□□□□ 0.23
APEX1-205ENST00000553555 MYH2Q9UKX2 1941 aa16.49■□□□□ 0.23
APEX1-205ENST00000553555 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
APEX1-205ENST00000553555 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
APEX1-205ENST00000553555 SCN9AQ15858 1988 aa16.49■□□□□ 0.23
APEX1-205ENST00000553555 G3V3G9 751 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 GPAA1O43292 621 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 CYP7A1P22680 504 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 PRDX5P30044 214 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 ANAPC15P60006 121 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 KIAA2012Q0VF49 1180 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 TMED8Q6PL24 325 aaPredicted RBP16.48■□□□□ 0.23
APEX1-205ENST00000553555 PODNQ7Z5L7 613 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 ZNF384Q8TF68 577 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 DSCC1Q9BVC3 393 aa16.48■□□□□ 0.23
APEX1-205ENST00000553555 RBM8AQ9Y5S9 174 aaKnown RBP16.48■□□□□ 0.23
APEX1-205ENST00000553555 HSPD1P10809 573 aaKnown RBP16.48■□□□□ 0.23
APEX1-205ENST00000553555 GTF2IP78347 998 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms