RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 AXIN2Q9Y2T1 843 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 TONSLQ96HA7 1378 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 BRCA2P51587 3418 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 LAMB4A4D0S4 1761 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC7Q96M83 1385 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.86□□□□□ -1.47
PFDN5-219ENST00000553171 GOLGA6L6A8MZA4 724 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 NBPF7P0C2Y1 421 aaPredicted RBP5.86□□□□□ -1.47
PFDN5-219ENST00000553171 KCNA2P16389 499 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 PLCG2P16885 1265 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 PRIM1P49642 420 aaKnown RBP5.86□□□□□ -1.47
PFDN5-219ENST00000553171 CCT2P78371 535 aaKnown RBP5.86□□□□□ -1.47
PFDN5-219ENST00000553171 TRDNQ13061 729 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 C11orf91Q3C1V1 193 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC92Q53HC0 331 aaPredicted RBP5.86□□□□□ -1.47
PFDN5-219ENST00000553171 LARP1BQ659C4 914 aaKnown RBP5.86□□□□□ -1.47
PFDN5-219ENST00000553171 EP400NLQ6ZTU2 488 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 OTUD6AQ7L8S5 288 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 FILIP1Q7Z7B0 1213 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 HSCBQ8IWL3 235 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 DEFB123Q8N688 67 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 ENOX1Q8TC92 643 aaKnown RBP5.86□□□□□ -1.47
PFDN5-219ENST00000553171 KCNB2Q92953 911 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 TEX13AQ9BXU3 409 aaPredicted RBP5.86□□□□□ -1.47
PFDN5-219ENST00000553171 RETREG1Q9H6L5 497 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 RRAGDQ9NQL2 400 aaPredicted RBP5.86□□□□□ -1.47
PFDN5-219ENST00000553171 MTMR10Q9NXD2 777 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 IVNS1ABPQ9Y6Y0 642 aa5.86□□□□□ -1.47
PFDN5-219ENST00000553171 ADAMTSL1Q8N6G6 1762 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 MUC3AQ02505 3323 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 PPIP5K1Q6PFW1 1433 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 NSD2O96028 1365 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 IL16Q14005 1332 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 TMEM265A0A087WTH1 108 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 A0A1W2PPC1 479 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 HOXA2O43364 376 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 TIMM44O43615 452 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC175P0C221 793 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 MAGEA8P43361 318 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 SARNPP82979 210 aaKnown RBP5.85□□□□□ -1.47
PFDN5-219ENST00000553171 FMR1Q06787 632 aaKnown RBP eCLIP5.85□□□□□ -1.47
PFDN5-219ENST00000553171 EAPPQ56P03 285 aaPredicted RBP5.85□□□□□ -1.47
PFDN5-219ENST00000553171 INTS3Q68E01 1043 aaKnown RBP5.85□□□□□ -1.47
PFDN5-219ENST00000553171 FBXO46Q6PJ61 603 aaPredicted RBP5.85□□□□□ -1.47
PFDN5-219ENST00000553171 SAPCD2Q86UD0 394 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 ALYREFQ86V81 257 aaKnown RBP5.85□□□□□ -1.47
PFDN5-219ENST00000553171 KLHL23Q8NBE8 558 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 SYMPKQ92797 1274 aaKnown RBP5.85□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC102AQ96A19 550 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 AGAP3Q96P47 875 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 RPS6KC1Q96S38 1066 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 ZIC5Q96T25 663 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 NOL7Q9UMY1 257 aaKnown RBP5.85□□□□□ -1.47
PFDN5-219ENST00000553171 AKAP2Q9Y2D5 859 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 ITSN1Q15811 1721 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 TIAM2Q8IVF5 1701 aa5.85□□□□□ -1.47
PFDN5-219ENST00000553171 SLIT3O75094 1523 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 ZBED9Q6R2W3 1325 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 SCN4AP35499 1836 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC196A0A1B0GTZ2 297 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 TNFRSF10AO00220 468 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 NFKBIEO00221 500 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 GTPBP6O43824 516 aaPredicted RBP5.84□□□□□ -1.47
PFDN5-219ENST00000553171 TRPC1P48995 793 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 NOGQ13253 232 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 DCTN1Q14203 1278 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 ERFEQ4G0M1 354 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 AMOTQ4VCS5 1084 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 NAALADL2Q58DX5 795 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 PNMA8AQ86V59 439 aaPredicted RBP5.84□□□□□ -1.47
PFDN5-219ENST00000553171 LMNTD2Q8IXW0 634 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 NLGN1Q8N2Q7 840 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 RNF166Q96A37 237 aaPredicted RBP5.84□□□□□ -1.47
PFDN5-219ENST00000553171 CHMP4CQ96CF2 233 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 SEZ6LQ9BYH1 1024 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 KIF3AQ9Y496 699 aa5.84□□□□□ -1.47
PFDN5-219ENST00000553171 DDX49Q9Y6V7 483 aaKnown RBP5.84□□□□□ -1.47
PFDN5-219ENST00000553171 LAMA3Q16787 3333 aa5.84□□□□□ -1.48
PFDN5-219ENST00000553171 MUC6Q6W4X9 2439 aa5.84□□□□□ -1.48
PFDN5-219ENST00000553171 CCDC88AQ3V6T2 1871 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 NSD3Q9BZ95 1437 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 INSRP06213 1382 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 ANKRD36BQ8N2N9 1353 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 ANKRD18BA2A2Z9 1011 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 TULP2O00295 520 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 HTATSF1O43719 755 aaKnown RBP5.83□□□□□ -1.48
PFDN5-219ENST00000553171 TRPA1O75762 1119 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 FOSL1P15407 271 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 CD53P19397 219 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 GTF2A1P52655 376 aaPredicted RBP5.83□□□□□ -1.48
PFDN5-219ENST00000553171 COL19A1Q14993 1142 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 TMEM132EQ6IEE7 984 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 UBE2Q1Q7Z7E8 422 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 LCA5Q86VQ0 697 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 NLRP13Q86W25 1043 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 IQCF2Q8IXL9 164 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 RASEFQ8IZ41 740 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 ABTB2Q8N961 1025 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 SMCR8Q8TEV9 937 aaPredicted RBP5.83□□□□□ -1.48
PFDN5-219ENST00000553171 FMNL2Q96PY5 1086 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms