RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 DACT2Q5SW24 774 aa12.6□□□□□ -0.39
TRAFD1-208ENST00000552890 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
TRAFD1-208ENST00000552890 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
TRAFD1-208ENST00000552890 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
TRAFD1-208ENST00000552890 CLEC11AQ9Y240 323 aa12.6□□□□□ -0.39
TRAFD1-208ENST00000552890 IRS2Q9Y4H2 1338 aa12.6□□□□□ -0.39
TRAFD1-208ENST00000552890 GYG1P46976 350 aa12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 EAPPQ56P03 285 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 MFSD14BQ5SR56 506 aa12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 C20orf194Q5TEA3 1177 aa12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 TXNRD3Q86VQ6 643 aa12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 GCC1Q96CN9 775 aa12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 ZNF512BQ96KM6 892 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 LRRCC1Q9C099 1032 aa12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 SERPINA10Q9UK55 444 aa12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-208ENST00000552890 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 C1QTNF8P60827 252 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 TNNI3KQ59H18 835 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 CCDC102BQ68D86 513 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 CERS3Q8IU89 383 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 MTMR14Q8NCE2 650 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 RHPN1Q8TCX5 695 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 DCPSQ96C86 337 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 XAGE2Q96GT9 111 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 GPR101Q96P66 508 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 GMLQ99445 158 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 FPGT-TNNI3KV9GXZ4 949 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 PITPNM2Q9BZ72 1349 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 SALL1Q9NSC2 1324 aa12.58□□□□□ -0.4
TRAFD1-208ENST00000552890 MAP4K4O95819 1239 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 EPS15P42566 896 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 BCAMP50895 628 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 TIMM10P62072 90 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 GSTO1P78417 241 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 HDAC1Q13547 482 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 TNFAIP1Q13829 316 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 DLGAP5Q15398 846 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 TTC39AQ5SRH9 613 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 DCTPP1Q9H773 170 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 MYOZ2Q9NPC6 264 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 PGAP2Q9UHJ9 254 aa12.57□□□□□ -0.4
TRAFD1-208ENST00000552890 PSME4Q14997 1843 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 POTECB2RU33 542 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 LDHBP07195 334 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 NEFLP07196 543 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 LDHCP07864 332 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 LRRFIP1Q32MZ4 808 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 SULF1Q8IWU6 871 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 CRBNQ96SW2 442 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 TMOD2Q9NZR1 351 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 EXOC6BQ9Y2D4 811 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 COL4A1P02462 1669 aa12.56□□□□□ -0.4
TRAFD1-208ENST00000552890 COL4A5P29400 1685 aa12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 SNAP23O00161 211 aa12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 KLRK1P26718 216 aa12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 ARID4AP29374 1257 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 APLP1P51693 650 aa12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 CHAF1AQ13111 956 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 AACSQ86V21 672 aa12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 APOBEC3FQ8IUX4 373 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 TEKT1Q969V4 418 aa12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 HOOK2Q96ED9 719 aa12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 TTF2Q9UNY4 1162 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 PPP2R3BQ9Y5P8 575 aa12.55□□□□□ -0.4
TRAFD1-208ENST00000552890 A0A1B0GUL6 1792 aa12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 NF2P35240 595 aa12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 TNNI2P48788 182 aa12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 RBM5P52756 815 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 HHIPL2Q6UWX4 724 aa12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 SLC51AQ86UW1 340 aa12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 KIAA0825Q8IV33 1275 aa12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 NOL10Q9BSC4 688 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 KCNQ5Q9NR82 932 aa12.54□□□□□ -0.4
TRAFD1-208ENST00000552890 WTIPA6NIX2 430 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-208ENST00000552890 ERC2O15083 957 aa12.53□□□□□ -0.4
TRAFD1-208ENST00000552890 FKBP1CQ5VVH2 108 aa12.53□□□□□ -0.4
TRAFD1-208ENST00000552890 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
TRAFD1-208ENST00000552890 TICAM2Q86XR7 235 aa12.53□□□□□ -0.4
TRAFD1-208ENST00000552890 DZIP1Q86YF9 867 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-208ENST00000552890 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
TRAFD1-208ENST00000552890 PLCG2P16885 1265 aa12.52□□□□□ -0.41
TRAFD1-208ENST00000552890 PHKA1P46020 1223 aa12.52□□□□□ -0.41
TRAFD1-208ENST00000552890 SCARF1Q14162 830 aa12.52□□□□□ -0.41
TRAFD1-208ENST00000552890 TBC1D10BQ4KMP7 808 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-208ENST00000552890 KRT26Q7Z3Y9 468 aa12.52□□□□□ -0.41
TRAFD1-208ENST00000552890 ZDHHC15Q96MV8 337 aa12.52□□□□□ -0.41
TRAFD1-208ENST00000552890 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.41
TRAFD1-208ENST00000552890 COL1A1P02452 1464 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-208ENST00000552890 SCN9AQ15858 1988 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 BAG3O95817 575 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 HSPA6P17066 643 aa12.51□□□□□ -0.41
TRAFD1-208ENST00000552890 FKBP1BP68106 108 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms