RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 CD44P16070 742 aaKnown RBP9.5□□□□□ -0.89
NPAS3-213ENST00000552874 ARID4AP29374 1257 aaPredicted RBP9.5□□□□□ -0.89
NPAS3-213ENST00000552874 PHKA1P46020 1223 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 SCNN1DP51172 638 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 CXCL9Q07325 125 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 DACT2Q5SW24 774 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 NIM1KQ8IY84 436 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 CERS5Q8N5B7 392 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 COA1Q9GZY4 146 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 CD209Q9NNX6 404 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
NPAS3-213ENST00000552874 PDS5AQ29RF7 1337 aaKnown RBP9.5□□□□□ -0.89
NPAS3-213ENST00000552874 MYH1P12882 1939 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 GLTPD2A6NH11 291 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 PSMD14O00487 310 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 VIL1P09327 827 aaKnown RBP9.49□□□□□ -0.89
NPAS3-213ENST00000552874 SLC5A1P13866 664 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 BCAMP50895 628 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 G3BP1Q13283 466 aaKnown RBP eCLIP9.49□□□□□ -0.89
NPAS3-213ENST00000552874 SCARF1Q14162 830 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 PODNQ7Z5L7 613 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 ERC1Q8IUD2 1116 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 KIF1BPQ96EK5 621 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 XAGE2Q96GT9 111 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
NPAS3-213ENST00000552874 TMX4Q9H1E5 349 aaPredicted RBP9.49□□□□□ -0.89
NPAS3-213ENST00000552874 BAZ2AQ9UIF9 1905 aaKnown RBP9.48□□□□□ -0.89
NPAS3-213ENST00000552874 LAMA4Q16363 1823 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 SHTN1A0MZ66 631 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 SMARCA5O60264 1052 aaPredicted RBP9.48□□□□□ -0.89
NPAS3-213ENST00000552874 RAB11FIP3O75154 756 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 KCNJ4P48050 445 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 TIMM10P62072 90 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 RASGRF1Q13972 1273 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 GRIK5Q16478 980 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 HSP90AB4PQ58FF6 505 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 CCDC102BQ68D86 513 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 ZNF804AQ7Z570 1209 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 GPC2Q8N158 579 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 ZNF512BQ96KM6 892 aaPredicted RBP9.48□□□□□ -0.89
NPAS3-213ENST00000552874 ZC3H12CQ9C0D7 883 aaKnown RBP9.48□□□□□ -0.89
NPAS3-213ENST00000552874 IL1RAPL2Q9NP60 686 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 MYH8P13535 1937 aa9.48□□□□□ -0.89
NPAS3-213ENST00000552874 RAD17O75943 681 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 DDNO94850 711 aaPredicted RBP9.47□□□□□ -0.89
NPAS3-213ENST00000552874 IFIT1P09914 478 aaKnown RBP9.47□□□□□ -0.89
NPAS3-213ENST00000552874 HIBADHP31937 336 aaKnown RBP9.47□□□□□ -0.89
NPAS3-213ENST00000552874 MCAMP43121 646 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 FKBP1AP62942 108 aaKnown RBP9.47□□□□□ -0.89
NPAS3-213ENST00000552874 STRIP1Q5VSL9 837 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 CIAPIN1Q6FI81 312 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 RSBN1LQ6PCB5 846 aaPredicted RBP9.47□□□□□ -0.89
NPAS3-213ENST00000552874 ZNF784Q8NCA9 323 aaPredicted RBP9.47□□□□□ -0.89
NPAS3-213ENST00000552874 OTUD7AQ8TE49 926 aaPredicted RBP9.47□□□□□ -0.89
NPAS3-213ENST00000552874 ZNF384Q8TF68 577 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 JDP2Q8WYK2 163 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 MXD3Q9BW11 206 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 AKAP2Q9Y2D5 859 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 SALL1Q9NSC2 1324 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 RFX7Q2KHR2 1363 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 ATAD5Q96QE3 1844 aa9.47□□□□□ -0.89
NPAS3-213ENST00000552874 USP17L3A6NCW0 530 aa9.46□□□□□ -0.9
NPAS3-213ENST00000552874 USP17L4A6NCW7 530 aa9.46□□□□□ -0.9
NPAS3-213ENST00000552874 KIF3CO14782 793 aa9.46□□□□□ -0.9
NPAS3-213ENST00000552874 EGFRP00533 1210 aa9.46□□□□□ -0.9
NPAS3-213ENST00000552874 GMPSP49915 693 aaPredicted RBP9.46□□□□□ -0.9
NPAS3-213ENST00000552874 PI16Q6UXB8 463 aa9.46□□□□□ -0.9
NPAS3-213ENST00000552874 USP17L1Q7RTZ2 530 aa9.46□□□□□ -0.9
NPAS3-213ENST00000552874 GCC1Q96CN9 775 aa9.46□□□□□ -0.9
NPAS3-213ENST00000552874 LRRCC1Q9C099 1032 aa9.46□□□□□ -0.9
NPAS3-213ENST00000552874 NMRK2Q9NPI5 230 aa9.46□□□□□ -0.9
NPAS3-213ENST00000552874 IQSEC3Q9UPP2 1182 aaPredicted RBP9.46□□□□□ -0.9
NPAS3-213ENST00000552874 SEMA3EO15041 775 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 YY1P25490 414 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 EIF6P56537 245 aaKnown RBP9.45□□□□□ -0.9
NPAS3-213ENST00000552874 ZNF280AP59817 542 aaPredicted RBP9.45□□□□□ -0.9
NPAS3-213ENST00000552874 OS9Q13438 667 aaPredicted RBP9.45□□□□□ -0.9
NPAS3-213ENST00000552874 AACSQ86V21 672 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 AGBL3Q8NEM8 1001 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 PI4K2BQ8TCG2 481 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 DPF2Q92785 391 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 ZBED3Q96IU2 234 aaPredicted RBP9.45□□□□□ -0.9
NPAS3-213ENST00000552874 CCDC8Q9H0W5 538 aaPredicted RBP9.45□□□□□ -0.9
NPAS3-213ENST00000552874 GPRC5DQ9NZD1 345 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 HMG20BQ9P0W2 317 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 AOX1Q06278 1338 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 PHIPQ8WWQ0 1821 aa9.45□□□□□ -0.9
NPAS3-213ENST00000552874 APBB1O00213 710 aa9.44□□□□□ -0.9
NPAS3-213ENST00000552874 RPS12P25398 132 aaKnown RBP9.44□□□□□ -0.9
NPAS3-213ENST00000552874 PDE4AP27815 886 aa9.44□□□□□ -0.9
NPAS3-213ENST00000552874 GTF2IP78347 998 aa9.44□□□□□ -0.9
NPAS3-213ENST00000552874 NUCB1Q02818 461 aa9.44□□□□□ -0.9
NPAS3-213ENST00000552874 TRPM4Q8TD43 1214 aa9.44□□□□□ -0.9
NPAS3-213ENST00000552874 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.44□□□□□ -0.9
NPAS3-213ENST00000552874 JAG2Q9Y219 1238 aa9.44□□□□□ -0.9
NPAS3-213ENST00000552874 MYO3BQ8WXR4 1341 aa9.44□□□□□ -0.9
NPAS3-213ENST00000552874 THSD7BQ9C0I4 1608 aa9.44□□□□□ -0.9
NPAS3-213ENST00000552874 PTPRFP10586 1907 aa9.44□□□□□ -0.9
NPAS3-213ENST00000552874 SSC5DA1L4H1 1573 aa9.43□□□□□ -0.9
NPAS3-213ENST00000552874 POTEIP0CG38 1075 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms