RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-215ENST00000552555 A0A1B0GUL6 1792 aa12.28□□□□□ -0.44
DDX23-215ENST00000552555 SNAP23O00161 211 aa12.27□□□□□ -0.45
DDX23-215ENST00000552555 BRD1O95696 1058 aa12.27□□□□□ -0.45
DDX23-215ENST00000552555 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
DDX23-215ENST00000552555 CPA1P15085 419 aa12.27□□□□□ -0.45
DDX23-215ENST00000552555 HOXA10P31260 410 aaPredicted RBP12.27□□□□□ -0.45
DDX23-215ENST00000552555 EXOSC10Q01780 885 aaKnown RBP12.27□□□□□ -0.45
DDX23-215ENST00000552555 MAP3K12Q12852 859 aa12.27□□□□□ -0.45
DDX23-215ENST00000552555 GRAPQ13588 217 aa12.27□□□□□ -0.45
DDX23-215ENST00000552555 TOB2Q14106 344 aaPredicted RBP12.27□□□□□ -0.45
DDX23-215ENST00000552555 SLC9C2Q5TAH2 1124 aa12.27□□□□□ -0.45
DDX23-215ENST00000552555 STOX1Q6ZVD7 989 aa12.27□□□□□ -0.45
DDX23-215ENST00000552555 FLAD1Q8NFF5 587 aa12.27□□□□□ -0.45
DDX23-215ENST00000552555 GRAPLQ8TC17 118 aaPredicted RBP12.27□□□□□ -0.45
DDX23-215ENST00000552555 FAM84BQ96KN1 310 aaPredicted RBP12.27□□□□□ -0.45
DDX23-215ENST00000552555 GNL3LQ9NVN8 582 aaKnown RBP12.27□□□□□ -0.45
DDX23-215ENST00000552555 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.27□□□□□ -0.45
DDX23-215ENST00000552555 TNRC6CQ9HCJ0 1690 aaKnown RBP12.26□□□□□ -0.45
DDX23-215ENST00000552555 RGPD3A6NKT7 1758 aaPredicted RBP12.26□□□□□ -0.45
DDX23-215ENST00000552555 RGPD4Q7Z3J3 1758 aa12.26□□□□□ -0.45
DDX23-215ENST00000552555 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
DDX23-215ENST00000552555 GPAA1O43292 621 aa12.26□□□□□ -0.45
DDX23-215ENST00000552555 FGAP02671 866 aa12.26□□□□□ -0.45
DDX23-215ENST00000552555 SERPINB2P05120 415 aa12.26□□□□□ -0.45
DDX23-215ENST00000552555 COL9A3Q14050 684 aaPredicted RBP12.26□□□□□ -0.45
DDX23-215ENST00000552555 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
DDX23-215ENST00000552555 DHX32Q7L7V1 743 aaKnown RBP12.26□□□□□ -0.45
DDX23-215ENST00000552555 STRBPQ96SI9 672 aaKnown RBP12.26□□□□□ -0.45
DDX23-215ENST00000552555 WWC3Q9ULE0 1092 aa12.26□□□□□ -0.45
DDX23-215ENST00000552555 DENND2AQ9ULE3 1009 aa12.26□□□□□ -0.45
DDX23-215ENST00000552555 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
DDX23-215ENST00000552555 ZNF532Q9HCE3 1301 aa12.26□□□□□ -0.45
DDX23-215ENST00000552555 DOCK2Q92608 1830 aa12.25□□□□□ -0.45
DDX23-215ENST00000552555 IDH1O75874 414 aaKnown RBP12.25□□□□□ -0.45
DDX23-215ENST00000552555 EVCP57679 992 aa12.25□□□□□ -0.45
DDX23-215ENST00000552555 DDR1Q08345 913 aa12.25□□□□□ -0.45
DDX23-215ENST00000552555 ST3GAL1Q11201 340 aa12.25□□□□□ -0.45
DDX23-215ENST00000552555 ME3Q16798 604 aa12.25□□□□□ -0.45
DDX23-215ENST00000552555 CAVIN4Q5BKX8 364 aa12.25□□□□□ -0.45
DDX23-215ENST00000552555 TPCN1Q9ULQ1 816 aa12.25□□□□□ -0.45
DDX23-215ENST00000552555 LEMD3Q9Y2U8 911 aa12.25□□□□□ -0.45
DDX23-215ENST00000552555 WDR19Q8NEZ3 1342 aa12.25□□□□□ -0.45
DDX23-215ENST00000552555 E7EWF7 191 aa12.24□□□□□ -0.45
DDX23-215ENST00000552555 BAG4O95429 457 aaKnown RBP12.24□□□□□ -0.45
DDX23-215ENST00000552555 LARGE1O95461 756 aa12.24□□□□□ -0.45
DDX23-215ENST00000552555 APBA3O96018 575 aa12.24□□□□□ -0.45
DDX23-215ENST00000552555 COL1A1P02452 1464 aaPredicted RBP12.24□□□□□ -0.45
DDX23-215ENST00000552555 GNAT2P19087 354 aa12.24□□□□□ -0.45
DDX23-215ENST00000552555 ST5P78524 1137 aa12.24□□□□□ -0.45
DDX23-215ENST00000552555 IMMTQ16891 758 aaKnown RBP12.24□□□□□ -0.45
DDX23-215ENST00000552555 ZNF827Q17R98 1081 aa12.24□□□□□ -0.45
DDX23-215ENST00000552555 CASZ1Q86V15 1759 aa12.24□□□□□ -0.45
DDX23-215ENST00000552555 NLGN1Q8N2Q7 840 aa12.24□□□□□ -0.45
DDX23-215ENST00000552555 CRAMP1Q96RY5 1269 aa12.24□□□□□ -0.45
DDX23-215ENST00000552555 PATL2C9JE40 543 aaKnown RBP12.23□□□□□ -0.45
DDX23-215ENST00000552555 BBOX1O75936 387 aa12.23□□□□□ -0.45
DDX23-215ENST00000552555 GYG1P46976 350 aa12.23□□□□□ -0.45
DDX23-215ENST00000552555 PKP1Q13835 747 aa12.23□□□□□ -0.45
DDX23-215ENST00000552555 TMC4Q7Z404 712 aa12.23□□□□□ -0.45
DDX23-215ENST00000552555 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
DDX23-215ENST00000552555 XDHP47989 1333 aa12.22□□□□□ -0.45
DDX23-215ENST00000552555 WDR33Q9C0J8 1336 aaKnown RBP12.22□□□□□ -0.45
DDX23-215ENST00000552555 SALL1Q9NSC2 1324 aa12.22□□□□□ -0.45
DDX23-215ENST00000552555 WTIPA6NIX2 430 aaPredicted RBP12.22□□□□□ -0.45
DDX23-215ENST00000552555 HIBADHP31937 336 aaKnown RBP12.22□□□□□ -0.45
DDX23-215ENST00000552555 TTLL5Q6EMB2 1281 aa12.22□□□□□ -0.45
DDX23-215ENST00000552555 COL23A1Q86Y22 540 aaPredicted RBP12.22□□□□□ -0.45
DDX23-215ENST00000552555 MAGEB6Q8N7X4 407 aa12.22□□□□□ -0.45
DDX23-215ENST00000552555 RBM17Q96I25 401 aaKnown RBP12.22□□□□□ -0.45
DDX23-215ENST00000552555 PODXL2Q9NZ53 605 aa12.22□□□□□ -0.45
DDX23-215ENST00000552555 MYH7P12883 1935 aa12.21□□□□□ -0.45
DDX23-215ENST00000552555 TNS1Q9HBL0 1735 aaKnown RBP12.21□□□□□ -0.45
DDX23-215ENST00000552555 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
DDX23-215ENST00000552555 SKOR2Q2VWA4 1001 aaPredicted RBP12.21□□□□□ -0.45
DDX23-215ENST00000552555 Q6ZUG5 572 aa12.21□□□□□ -0.45
DDX23-215ENST00000552555 NOL8Q76FK4 1167 aaKnown RBP12.21□□□□□ -0.45
DDX23-215ENST00000552555 MB21D2Q8IYB1 491 aaPredicted RBP12.21□□□□□ -0.45
DDX23-215ENST00000552555 CCDC24Q8N4L8 307 aa12.21□□□□□ -0.45
DDX23-215ENST00000552555 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
DDX23-215ENST00000552555 LLPHQ9BRT6 129 aaKnown RBP12.21□□□□□ -0.45
DDX23-215ENST00000552555 BRIP1Q9BX63 1249 aa12.21□□□□□ -0.45
DDX23-215ENST00000552555 SMC3Q9UQE7 1217 aa12.21□□□□□ -0.45
DDX23-215ENST00000552555 GSG1L2A8MUP6 293 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 ZNF213O14771 459 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 TRAK2O60296 914 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 PFKFB2O60825 505 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 KLRK1P26718 216 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 CCDC83Q8IWF9 413 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 TDRD7Q8NHU6 1098 aaKnown RBP12.2□□□□□ -0.46
DDX23-215ENST00000552555 RPGRQ92834 1020 aaKnown RBP12.2□□□□□ -0.46
DDX23-215ENST00000552555 GTF3C6Q969F1 213 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 ZNF274Q96GC6 653 aaPredicted RBP12.2□□□□□ -0.46
DDX23-215ENST00000552555 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 LRP2BPQ9P2M1 347 aa12.2□□□□□ -0.46
DDX23-215ENST00000552555 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
DDX23-215ENST00000552555 NPHP1O15259 732 aa12.19□□□□□ -0.46
DDX23-215ENST00000552555 MBD4O95243 580 aa12.19□□□□□ -0.46
DDX23-215ENST00000552555 SYT1P21579 422 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms