RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 SPEF2Q9C093 1822 aa21.62■■□□□ 1.05
CACNB3-222ENST00000552465 POTEFA5A3E0 1075 aa21.62■■□□□ 1.05
CACNB3-222ENST00000552465 SNAP23O00161 211 aa21.62■■□□□ 1.05
CACNB3-222ENST00000552465 SUPT20HL1Q3ZLR7 823 aa21.62■■□□□ 1.05
CACNB3-222ENST00000552465 C15orf52Q6ZUT6 534 aaKnown RBP21.62■■□□□ 1.05
CACNB3-222ENST00000552465 SSC5DA1L4H1 1573 aa21.61■■□□□ 1.05
CACNB3-222ENST00000552465 TAF5LO75529 589 aa21.61■■□□□ 1.05
CACNB3-222ENST00000552465 CFAP100Q494V2 611 aa21.61■■□□□ 1.05
CACNB3-222ENST00000552465 ERO1AQ96HE7 468 aa21.61■■□□□ 1.05
CACNB3-222ENST00000552465 PRMT6Q96LA8 375 aaPredicted RBP21.61■■□□□ 1.05
CACNB3-222ENST00000552465 PTPN22Q9Y2R2 807 aa21.61■■□□□ 1.05
CACNB3-222ENST00000552465 MYH3P11055 1940 aa21.61■■□□□ 1.05
CACNB3-222ENST00000552465 CLRN2A0PK11 232 aa21.6■■□□□ 1.05
CACNB3-222ENST00000552465 ANKRD18BA2A2Z9 1011 aa21.6■■□□□ 1.05
CACNB3-222ENST00000552465 SPDYE2BA6NHP3 402 aa21.6■■□□□ 1.05
CACNB3-222ENST00000552465 F8W031 263 aaPredicted RBP21.6■■□□□ 1.05
CACNB3-222ENST00000552465 MYO1BO43795 1136 aa21.6■■□□□ 1.05
CACNB3-222ENST00000552465 SPDYE6P0CI01 402 aa21.6■■□□□ 1.05
CACNB3-222ENST00000552465 TWISTNBQ3B726 338 aaPredicted RBP21.6■■□□□ 1.05
CACNB3-222ENST00000552465 HELBQ8NG08 1087 aaPredicted RBP21.6■■□□□ 1.05
CACNB3-222ENST00000552465 MYH16Q9H6N6 1097 aa21.6■■□□□ 1.05
CACNB3-222ENST00000552465 USP2O75604 605 aaPredicted RBP21.59■■□□□ 1.05
CACNB3-222ENST00000552465 IL1R1P14778 569 aa21.59■■□□□ 1.05
CACNB3-222ENST00000552465 FKBP1AP62942 108 aaKnown RBP21.59■■□□□ 1.05
CACNB3-222ENST00000552465 HABP4Q5JVS0 413 aaKnown RBP21.59■■□□□ 1.05
CACNB3-222ENST00000552465 NBPF12Q5TAG4 269 aaPredicted RBP21.59■■□□□ 1.05
CACNB3-222ENST00000552465 OTUD7BQ6GQQ9 843 aa21.59■■□□□ 1.05
CACNB3-222ENST00000552465 GJA5P36382 358 aa21.58■■□□□ 1.05
CACNB3-222ENST00000552465 IREB2P48200 963 aaKnown RBP21.58■■□□□ 1.05
CACNB3-222ENST00000552465 FLIIQ13045 1269 aa21.58■■□□□ 1.05
CACNB3-222ENST00000552465 CRHR2Q13324 411 aa21.58■■□□□ 1.05
CACNB3-222ENST00000552465 ZNF804AQ7Z570 1209 aa21.58■■□□□ 1.05
CACNB3-222ENST00000552465 LINS1Q8NG48 757 aa21.58■■□□□ 1.05
CACNB3-222ENST00000552465 CD99L2Q8TCZ2 262 aa21.58■■□□□ 1.05
CACNB3-222ENST00000552465 DNAAF4Q8WXU2 420 aa21.58■■□□□ 1.05
CACNB3-222ENST00000552465 VEZTQ9HBM0 779 aa21.58■■□□□ 1.05
CACNB3-222ENST00000552465 AOX1Q06278 1338 aa21.57■■□□□ 1.04
CACNB3-222ENST00000552465 PTPN18Q99952 460 aa21.57■■□□□ 1.04
CACNB3-222ENST00000552465 TESPA1A2RU30 521 aaPredicted RBP21.56■■□□□ 1.04
CACNB3-222ENST00000552465 IFIT5Q13325 482 aaKnown RBP21.56■■□□□ 1.04
CACNB3-222ENST00000552465 RASA3Q14644 834 aa21.56■■□□□ 1.04
CACNB3-222ENST00000552465 ANKRD13AQ8IZ07 590 aa21.56■■□□□ 1.04
CACNB3-222ENST00000552465 ARMC5Q96C12 935 aa21.56■■□□□ 1.04
CACNB3-222ENST00000552465 EFCC1Q9HA90 598 aa21.56■■□□□ 1.04
CACNB3-222ENST00000552465 FOXO4P98177 505 aa21.55■■□□□ 1.04
CACNB3-222ENST00000552465 SP3Q02447 781 aa21.55■■□□□ 1.04
CACNB3-222ENST00000552465 FKBP5Q13451 457 aaPredicted RBP21.55■■□□□ 1.04
CACNB3-222ENST00000552465 CCDC27Q2M243 656 aa21.55■■□□□ 1.04
CACNB3-222ENST00000552465 JAG2Q9Y219 1238 aa21.55■■□□□ 1.04
CACNB3-222ENST00000552465 RBM5P52756 815 aaKnown RBP eCLIP21.54■■□□□ 1.04
CACNB3-222ENST00000552465 WWC1Q8IX03 1113 aa21.54■■□□□ 1.04
CACNB3-222ENST00000552465 EN2P19622 333 aaPredicted RBP21.53■■□□□ 1.04
CACNB3-222ENST00000552465 CAP1Q01518 475 aa21.53■■□□□ 1.04
CACNB3-222ENST00000552465 CHMP3Q9Y3E7 222 aa21.53■■□□□ 1.04
CACNB3-222ENST00000552465 OPTNQ96CV9 577 aa21.52■■□□□ 1.04
CACNB3-222ENST00000552465 MS4A4AQ96JQ5 239 aa21.52■■□□□ 1.04
CACNB3-222ENST00000552465 ELP3Q9H9T3 547 aa21.52■■□□□ 1.04
CACNB3-222ENST00000552465 TNFAIP1Q13829 316 aa21.51■■□□□ 1.03
CACNB3-222ENST00000552465 SPDYE2Q495Y8 402 aa21.51■■□□□ 1.03
CACNB3-222ENST00000552465 ZNF70Q9UC06 446 aaPredicted RBP21.51■■□□□ 1.03
CACNB3-222ENST00000552465 FAM205AQ6ZU69 1335 aa21.51■■□□□ 1.03
CACNB3-222ENST00000552465 PLIN1O60240 522 aa21.5■■□□□ 1.03
CACNB3-222ENST00000552465 LMBR1LQ6UX01 489 aa21.5■■□□□ 1.03
CACNB3-222ENST00000552465 IL16Q14005 1332 aa21.5■■□□□ 1.03
CACNB3-222ENST00000552465 LDHAL6AQ6ZMR3 332 aa21.49■■□□□ 1.03
CACNB3-222ENST00000552465 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.49■■□□□ 1.03
CACNB3-222ENST00000552465 TDRD7Q8NHU6 1098 aaKnown RBP21.49■■□□□ 1.03
CACNB3-222ENST00000552465 ZNF594Q96JF6 807 aaPredicted RBP21.49■■□□□ 1.03
CACNB3-222ENST00000552465 TEPSINQ96N21 525 aa21.49■■□□□ 1.03
CACNB3-222ENST00000552465 TMEM106CQ9BVX2 250 aa21.49■■□□□ 1.03
CACNB3-222ENST00000552465 TDRD3Q9H7E2 651 aaKnown RBP21.49■■□□□ 1.03
CACNB3-222ENST00000552465 SERPINA10Q9UK55 444 aa21.49■■□□□ 1.03
CACNB3-222ENST00000552465 LAMB1P07942 1786 aa21.48■■□□□ 1.03
CACNB3-222ENST00000552465 CCDC57Q2TAC2 916 aa21.48■■□□□ 1.03
CACNB3-222ENST00000552465 EPHA10Q5JZY3 1008 aa21.48■■□□□ 1.03
CACNB3-222ENST00000552465 MFSD14BQ5SR56 506 aa21.48■■□□□ 1.03
CACNB3-222ENST00000552465 BEND3Q5T5X7 828 aa21.48■■□□□ 1.03
CACNB3-222ENST00000552465 BRI3BPQ8WY22 251 aa21.48■■□□□ 1.03
CACNB3-222ENST00000552465 ZNF333Q96JL9 665 aa21.48■■□□□ 1.03
CACNB3-222ENST00000552465 TTF2Q9UNY4 1162 aaKnown RBP21.48■■□□□ 1.03
CACNB3-222ENST00000552465 F6X3S4 739 aa21.47■■□□□ 1.03
CACNB3-222ENST00000552465 VAMP4O75379 141 aa21.47■■□□□ 1.03
CACNB3-222ENST00000552465 MAP3K9P80192 1104 aa21.47■■□□□ 1.03
CACNB3-222ENST00000552465 ARHGEF6Q15052 776 aa21.47■■□□□ 1.03
CACNB3-222ENST00000552465 CDAN1Q8IWY9 1227 aa21.47■■□□□ 1.03
CACNB3-222ENST00000552465 CNKSR2Q8WXI2 1034 aa21.47■■□□□ 1.03
CACNB3-222ENST00000552465 ZFYVE28Q9HCC9 887 aa21.47■■□□□ 1.03
CACNB3-222ENST00000552465 CNNM1Q9NRU3 951 aa21.47■■□□□ 1.03
CACNB3-222ENST00000552465 ECM29Q5VYK3 1845 aa21.46■■□□□ 1.03
CACNB3-222ENST00000552465 GTF2A2P52657 109 aa21.46■■□□□ 1.03
CACNB3-222ENST00000552465 TAF1CQ15572 869 aaPredicted RBP21.46■■□□□ 1.03
CACNB3-222ENST00000552465 TAF7LQ5H9L4 462 aa21.46■■□□□ 1.03
CACNB3-222ENST00000552465 DZIP1LQ8IYY4 767 aaKnown RBP21.46■■□□□ 1.03
CACNB3-222ENST00000552465 CCL15-CCL14A0A0B4J2E2 113 aa21.45■■□□□ 1.02
CACNB3-222ENST00000552465 TCP10L2B9ZVM9 353 aa21.45■■□□□ 1.02
CACNB3-222ENST00000552465 HIBADHP31937 336 aaKnown RBP21.45■■□□□ 1.02
CACNB3-222ENST00000552465 VGLL4Q14135 290 aa21.45■■□□□ 1.02
CACNB3-222ENST00000552465 UBE4AQ14139 1066 aa21.45■■□□□ 1.02
CACNB3-222ENST00000552465 CCL15Q16663 113 aa21.45■■□□□ 1.02
CACNB3-222ENST00000552465 NBPF11Q86T75 865 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms