RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 BCAMP50895 628 aa22.85■■□□□ 1.25
PRPF40B-216ENST00000552301 TFCP2Q12800 502 aa22.85■■□□□ 1.25
PRPF40B-216ENST00000552301 KIAA0825Q8IV33 1275 aa22.85■■□□□ 1.25
PRPF40B-216ENST00000552301 ZBTB40Q9NUA8 1239 aa22.85■■□□□ 1.25
PRPF40B-216ENST00000552301 GNL3LQ9NVN8 582 aaKnown RBP22.85■■□□□ 1.25
PRPF40B-216ENST00000552301 IQSEC3Q9UPP2 1182 aaPredicted RBP22.85■■□□□ 1.25
PRPF40B-216ENST00000552301 ZNF646O15015 1829 aaPredicted RBP22.85■■□□□ 1.25
PRPF40B-216ENST00000552301 HMMRO75330 724 aa22.84■■□□□ 1.25
PRPF40B-216ENST00000552301 MMP14P50281 582 aa22.84■■□□□ 1.25
PRPF40B-216ENST00000552301 FKBP1AP62942 108 aaKnown RBP22.84■■□□□ 1.25
PRPF40B-216ENST00000552301 CHAF1AQ13111 956 aaPredicted RBP22.84■■□□□ 1.25
PRPF40B-216ENST00000552301 FAM205AQ6ZU69 1335 aa22.83■■□□□ 1.25
PRPF40B-216ENST00000552301 HIRAP54198 1017 aaPredicted RBP22.83■■□□□ 1.25
PRPF40B-216ENST00000552301 MFSD14BQ5SR56 506 aa22.83■■□□□ 1.25
PRPF40B-216ENST00000552301 MYOZ2Q9NPC6 264 aa22.83■■□□□ 1.25
PRPF40B-216ENST00000552301 A0A1B0GUL7 405 aa22.82■■□□□ 1.24
PRPF40B-216ENST00000552301 EGFRP00533 1210 aa22.82■■□□□ 1.24
PRPF40B-216ENST00000552301 RPAP2Q8IXW5 612 aaPredicted RBP22.82■■□□□ 1.24
PRPF40B-216ENST00000552301 F8W031 263 aaPredicted RBP22.81■■□□□ 1.24
PRPF40B-216ENST00000552301 CERS5Q8N5B7 392 aa22.81■■□□□ 1.24
PRPF40B-216ENST00000552301 TBC1D22AQ8WUA7 517 aa22.81■■□□□ 1.24
PRPF40B-216ENST00000552301 DCPSQ96C86 337 aaKnown RBP22.81■■□□□ 1.24
PRPF40B-216ENST00000552301 NEUROD6Q96NK8 337 aa22.81■■□□□ 1.24
PRPF40B-216ENST00000552301 MYH13Q9UKX3 1938 aa22.8■■□□□ 1.24
PRPF40B-216ENST00000552301 ARAP2Q8WZ64 1704 aa22.8■■□□□ 1.24
PRPF40B-216ENST00000552301 ITGBL1O95965 494 aaPredicted RBP22.8■■□□□ 1.24
PRPF40B-216ENST00000552301 GORABQ5T7V8 394 aa22.8■■□□□ 1.24
PRPF40B-216ENST00000552301 GGA3Q9NZ52 723 aa22.8■■□□□ 1.24
PRPF40B-216ENST00000552301 NOP58Q9Y2X3 529 aaKnown RBP22.8■■□□□ 1.24
PRPF40B-216ENST00000552301 PASKQ96RG2 1323 aa22.8■■□□□ 1.24
PRPF40B-216ENST00000552301 ADORA1P30542 326 aa22.79■■□□□ 1.24
PRPF40B-216ENST00000552301 TIMM10P62072 90 aa22.79■■□□□ 1.24
PRPF40B-216ENST00000552301 HSP90AB4PQ58FF6 505 aa22.79■■□□□ 1.24
PRPF40B-216ENST00000552301 CDC37L1Q7L3B6 337 aa22.79■■□□□ 1.24
PRPF40B-216ENST00000552301 PGAP2Q9UHJ9 254 aa22.79■■□□□ 1.24
PRPF40B-216ENST00000552301 SCARF1Q14162 830 aa22.78■■□□□ 1.24
PRPF40B-216ENST00000552301 ERC1Q8IUD2 1116 aa22.78■■□□□ 1.24
PRPF40B-216ENST00000552301 XAGE2Q96GT9 111 aa22.78■■□□□ 1.24
PRPF40B-216ENST00000552301 GLIS2Q9BZE0 524 aaPredicted RBP22.78■■□□□ 1.24
PRPF40B-216ENST00000552301 PHKA1P46020 1223 aa22.77■■□□□ 1.24
PRPF40B-216ENST00000552301 DLGAP5Q15398 846 aa22.77■■□□□ 1.24
PRPF40B-216ENST00000552301 CCDC102BQ68D86 513 aa22.77■■□□□ 1.24
PRPF40B-216ENST00000552301 KRT26Q7Z3Y9 468 aa22.77■■□□□ 1.24
PRPF40B-216ENST00000552301 SULF1Q8IWU6 871 aa22.77■■□□□ 1.24
PRPF40B-216ENST00000552301 WDR66Q8TBY9 1149 aa22.77■■□□□ 1.24
PRPF40B-216ENST00000552301 TTF2Q9UNY4 1162 aaKnown RBP22.77■■□□□ 1.24
PRPF40B-216ENST00000552301 EXOC6BQ9Y2D4 811 aa22.77■■□□□ 1.24
PRPF40B-216ENST00000552301 SEMA3EO15041 775 aa22.76■■□□□ 1.23
PRPF40B-216ENST00000552301 RBM5P52756 815 aaKnown RBP eCLIP22.76■■□□□ 1.23
PRPF40B-216ENST00000552301 ANGEL2Q5VTE6 544 aaKnown RBP22.76■■□□□ 1.23
PRPF40B-216ENST00000552301 GPR108Q9NPR9 543 aa22.76■■□□□ 1.23
PRPF40B-216ENST00000552301 DENND2AQ9ULE3 1009 aa22.76■■□□□ 1.23
PRPF40B-216ENST00000552301 TRAF5O00463 557 aa22.75■■□□□ 1.23
PRPF40B-216ENST00000552301 TNNI3KQ59H18 835 aa22.75■■□□□ 1.23
PRPF40B-216ENST00000552301 FPGT-TNNI3KV9GXZ4 949 aa22.75■■□□□ 1.23
PRPF40B-216ENST00000552301 TMEM88BA6NKF7 163 aa22.74■■□□□ 1.23
PRPF40B-216ENST00000552301 WNT10BO00744 389 aa22.74■■□□□ 1.23
PRPF40B-216ENST00000552301 HTRA3P83110 453 aa22.74■■□□□ 1.23
PRPF40B-216ENST00000552301 NBPF9Q3BBW0 867 aa22.74■■□□□ 1.23
PRPF40B-216ENST00000552301 USP48Q86UV5 1035 aa22.74■■□□□ 1.23
PRPF40B-216ENST00000552301 CREBZFQ9NS37 354 aa22.74■■□□□ 1.23
PRPF40B-216ENST00000552301 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.74■■□□□ 1.23
PRPF40B-216ENST00000552301 MAST3O60307 1309 aa22.74■■□□□ 1.23
PRPF40B-216ENST00000552301 ASTN2O75129 1339 aaPredicted RBP22.74■■□□□ 1.23
PRPF40B-216ENST00000552301 MYO1BO43795 1136 aa22.73■■□□□ 1.23
PRPF40B-216ENST00000552301 CFAP100Q494V2 611 aa22.73■■□□□ 1.23
PRPF40B-216ENST00000552301 SUGT1Q9Y2Z0 365 aa22.73■■□□□ 1.23
PRPF40B-216ENST00000552301 PITPNM2Q9BZ72 1349 aa22.73■■□□□ 1.23
PRPF40B-216ENST00000552301 COL1A1P02452 1464 aaPredicted RBP22.73■■□□□ 1.23
PRPF40B-216ENST00000552301 ZGPATQ8N5A5 531 aaKnown RBP22.72■■□□□ 1.23
PRPF40B-216ENST00000552301 ZNF408Q9H9D4 720 aa22.72■■□□□ 1.23
PRPF40B-216ENST00000552301 TRPM7Q96QT4 1865 aa22.72■■□□□ 1.23
PRPF40B-216ENST00000552301 POLR2AP24928 1970 aaKnown RBP22.72■■□□□ 1.23
PRPF40B-216ENST00000552301 ADM5C9JUS6 153 aa22.71■■□□□ 1.23
PRPF40B-216ENST00000552301 APBB1O00213 710 aa22.71■■□□□ 1.23
PRPF40B-216ENST00000552301 CELF2O95319 508 aaKnown RBP22.71■■□□□ 1.23
PRPF40B-216ENST00000552301 SIRT2Q8IXJ6 389 aa22.71■■□□□ 1.23
PRPF40B-216ENST00000552301 MTMR14Q8NCE2 650 aa22.71■■□□□ 1.23
PRPF40B-216ENST00000552301 CRBNQ96SW2 442 aa22.71■■□□□ 1.23
PRPF40B-216ENST00000552301 SERPINA10Q9UK55 444 aa22.71■■□□□ 1.23
PRPF40B-216ENST00000552301 SPDYE2BA6NHP3 402 aa22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 UQCRFS1P1P0C7P4 283 aa22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 SPDYE6P0CI01 402 aa22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 FMR1Q06787 632 aaKnown RBP eCLIP22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 RASGRF1Q13972 1273 aa22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 CCDC158Q5M9N0 1113 aa22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 TTC39AQ5SRH9 613 aa22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 APOBEC3FQ8IUX4 373 aaKnown RBP22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 KIF1BPQ96EK5 621 aa22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 ABT1Q9ULW3 272 aaKnown RBP22.7■■□□□ 1.22
PRPF40B-216ENST00000552301 PDS5AQ29RF7 1337 aaKnown RBP22.69■■□□□ 1.22
PRPF40B-216ENST00000552301 ZBTB22O15209 634 aa22.69■■□□□ 1.22
PRPF40B-216ENST00000552301 RAB11FIP3O75154 756 aa22.69■■□□□ 1.22
PRPF40B-216ENST00000552301 CRKP46108 304 aa22.69■■□□□ 1.22
PRPF40B-216ENST00000552301 RHPN1Q8TCX5 695 aa22.69■■□□□ 1.22
PRPF40B-216ENST00000552301 TEKT1Q969V4 418 aa22.69■■□□□ 1.22
PRPF40B-216ENST00000552301 ZBED3Q96IU2 234 aaPredicted RBP22.69■■□□□ 1.22
PRPF40B-216ENST00000552301 DBNDD2Q9BQY9 259 aa22.69■■□□□ 1.22
PRPF40B-216ENST00000552301 SALL1Q9NSC2 1324 aa22.68■■□□□ 1.22
PRPF40B-216ENST00000552301 LDHBP07195 334 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms