RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 PDE2AO00408 941 aaPredicted RBP7.81□□□□□ -1.16
USP44-207ENST00000552237 C8AP07357 584 aa7.8□□□□□ -1.16
USP44-207ENST00000552237 CES1P23141 567 aa7.8□□□□□ -1.16
USP44-207ENST00000552237 TTC16Q8NEE8 873 aa7.8□□□□□ -1.16
USP44-207ENST00000552237 NUDT16Q96DE0 195 aaKnown RBP7.8□□□□□ -1.16
USP44-207ENST00000552237 CXXC1Q9P0U4 656 aaPredicted RBP7.8□□□□□ -1.16
USP44-207ENST00000552237 CYP26A1O43174 497 aa7.79□□□□□ -1.16
USP44-207ENST00000552237 PRNPP04156 253 aa7.79□□□□□ -1.16
USP44-207ENST00000552237 CAPN12Q6ZSI9 719 aa7.79□□□□□ -1.16
USP44-207ENST00000552237 FLCNQ8NFG4 579 aa7.79□□□□□ -1.16
USP44-207ENST00000552237 YIPF2Q9BWQ6 316 aa7.79□□□□□ -1.16
USP44-207ENST00000552237 BSDC1Q9NW68 430 aaPredicted RBP7.79□□□□□ -1.16
USP44-207ENST00000552237 ARID1BQ8NFD5 2236 aaPredicted RBP7.79□□□□□ -1.16
USP44-207ENST00000552237 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
USP44-207ENST00000552237 ACPPP15309 386 aa7.78□□□□□ -1.16
USP44-207ENST00000552237 PCSK2P16519 638 aa7.78□□□□□ -1.16
USP44-207ENST00000552237 JUNBP17275 347 aaPredicted RBP7.78□□□□□ -1.16
USP44-207ENST00000552237 IKBKEQ14164 716 aa7.78□□□□□ -1.16
USP44-207ENST00000552237 POU5F2Q8N7G0 328 aa7.78□□□□□ -1.16
USP44-207ENST00000552237 AGBL5Q8NDL9 886 aa7.78□□□□□ -1.16
USP44-207ENST00000552237 TBC1D32Q96NH3 1257 aa7.78□□□□□ -1.16
USP44-207ENST00000552237 SALL4Q9UJQ4 1053 aa7.78□□□□□ -1.16
USP44-207ENST00000552237 ZBTB39O15060 712 aa7.77□□□□□ -1.17
USP44-207ENST00000552237 CBLL1Q75N03 491 aa7.77□□□□□ -1.17
USP44-207ENST00000552237 SMG8Q8ND04 991 aaKnown RBP7.77□□□□□ -1.17
USP44-207ENST00000552237 FBLIM1Q8WUP2 373 aa7.77□□□□□ -1.17
USP44-207ENST00000552237 DZANK1Q9NVP4 752 aa7.77□□□□□ -1.17
USP44-207ENST00000552237 CNTN3Q9P232 1028 aa7.77□□□□□ -1.17
USP44-207ENST00000552237 ZMIZ1Q9ULJ6 1067 aa7.77□□□□□ -1.17
USP44-207ENST00000552237 SOX13Q9UN79 622 aa7.77□□□□□ -1.17
USP44-207ENST00000552237 TRPA1O75762 1119 aa7.76□□□□□ -1.17
USP44-207ENST00000552237 C1orf127Q8N9H9 656 aa7.76□□□□□ -1.17
USP44-207ENST00000552237 STK32AQ8WU08 396 aa7.76□□□□□ -1.17
USP44-207ENST00000552237 TMPRSS13Q9BYE2 586 aa7.76□□□□□ -1.17
USP44-207ENST00000552237 SUGCTQ9HAC7 445 aa7.76□□□□□ -1.17
USP44-207ENST00000552237 TIAF1O95411 115 aa7.75□□□□□ -1.17
USP44-207ENST00000552237 ELOAQ14241 798 aaKnown RBP7.75□□□□□ -1.17
USP44-207ENST00000552237 HGSNATQ68CP4 663 aa7.75□□□□□ -1.17
USP44-207ENST00000552237 BSNDQ8WZ55 320 aa7.75□□□□□ -1.17
USP44-207ENST00000552237 HHIPQ96QV1 700 aa7.75□□□□□ -1.17
USP44-207ENST00000552237 LOC100289279A0A1B0GTE1 492 aa7.74□□□□□ -1.17
USP44-207ENST00000552237 NFKBIEO00221 500 aa7.74□□□□□ -1.17
USP44-207ENST00000552237 DRD2P14416 443 aa7.74□□□□□ -1.17
USP44-207ENST00000552237 ITGB5P18084 799 aa7.74□□□□□ -1.17
USP44-207ENST00000552237 C8orf34Q49A92 452 aa7.74□□□□□ -1.17
USP44-207ENST00000552237 ZAR1Q86SH2 424 aa7.74□□□□□ -1.17
USP44-207ENST00000552237 ATCAYQ86WG3 371 aa7.74□□□□□ -1.17
USP44-207ENST00000552237 TMEM102Q8N9M5 508 aaPredicted RBP7.74□□□□□ -1.17
USP44-207ENST00000552237 PMEPA1Q969W9 287 aa7.74□□□□□ -1.17
USP44-207ENST00000552237 LRRC4CQ9HCJ2 640 aa7.74□□□□□ -1.17
USP44-207ENST00000552237 SOX1O00570 391 aaPredicted RBP7.73□□□□□ -1.17
USP44-207ENST00000552237 DNM1Q05193 864 aaKnown RBP7.73□□□□□ -1.17
USP44-207ENST00000552237 FAM69CQ0P6D2 419 aa7.73□□□□□ -1.17
USP44-207ENST00000552237 DUSP27Q5VZP5 1158 aa7.73□□□□□ -1.17
USP44-207ENST00000552237 CDPF1Q6NVV7 123 aa7.73□□□□□ -1.17
USP44-207ENST00000552237 SHISA5Q8N114 240 aa7.73□□□□□ -1.17
USP44-207ENST00000552237 OSMRQ99650 979 aa7.73□□□□□ -1.17
USP44-207ENST00000552237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.73□□□□□ -1.17
USP44-207ENST00000552237 EXOSC6Q5RKV6 272 aaKnown RBP7.72□□□□□ -1.17
USP44-207ENST00000552237 ASAP3Q8TDY4 903 aa7.72□□□□□ -1.17
USP44-207ENST00000552237 EDEM1Q92611 657 aa7.72□□□□□ -1.17
USP44-207ENST00000552237 PRKAG2Q9UGJ0 569 aa7.72□□□□□ -1.17
USP44-207ENST00000552237 ZNF777Q9ULD5 760 aaPredicted RBP7.72□□□□□ -1.17
USP44-207ENST00000552237 FAM170BA6NMN3 283 aa7.71□□□□□ -1.18
USP44-207ENST00000552237 ADMP35318 185 aa7.71□□□□□ -1.18
USP44-207ENST00000552237 TMEM132AQ24JP5 1023 aa7.71□□□□□ -1.18
USP44-207ENST00000552237 NFXL1Q6ZNB6 911 aa7.71□□□□□ -1.18
USP44-207ENST00000552237 CYP27A1Q02318 531 aa7.7□□□□□ -1.18
USP44-207ENST00000552237 GSTM4Q03013 218 aa7.7□□□□□ -1.18
USP44-207ENST00000552237 XKR5Q6UX68 686 aa7.7□□□□□ -1.18
USP44-207ENST00000552237 VN1R5Q7Z5H4 357 aa7.7□□□□□ -1.18
USP44-207ENST00000552237 C2CD4AQ8NCU7 369 aaPredicted RBP7.7□□□□□ -1.18
USP44-207ENST00000552237 NXPE3Q969Y0 559 aa7.7□□□□□ -1.18
USP44-207ENST00000552237 ZKSCAN3Q9BRR0 538 aa7.7□□□□□ -1.18
USP44-207ENST00000552237 SOX17Q9H6I2 414 aaPredicted RBP7.7□□□□□ -1.18
USP44-207ENST00000552237 PAK6Q9NQU5 681 aaPredicted RBP7.7□□□□□ -1.18
USP44-207ENST00000552237 BIN1O00499 593 aa7.69□□□□□ -1.18
USP44-207ENST00000552237 EIF4EBP3O60516 100 aaPredicted RBP7.69□□□□□ -1.18
USP44-207ENST00000552237 EDN3P14138 238 aa7.69□□□□□ -1.18
USP44-207ENST00000552237 RAB6AP20340 208 aa7.69□□□□□ -1.18
USP44-207ENST00000552237 SOX4Q06945 474 aaPredicted RBP7.69□□□□□ -1.18
USP44-207ENST00000552237 MAP7Q14244 749 aa7.69□□□□□ -1.18
USP44-207ENST00000552237 A6NHS1 94 aa7.68□□□□□ -1.18
USP44-207ENST00000552237 DLGAP3O95886 979 aa7.68□□□□□ -1.18
USP44-207ENST00000552237 PLCL1Q15111 1095 aa7.68□□□□□ -1.18
USP44-207ENST00000552237 TMEM164Q5U3C3 297 aa7.68□□□□□ -1.18
USP44-207ENST00000552237 EZH1Q92800 747 aaPredicted RBP7.68□□□□□ -1.18
USP44-207ENST00000552237 KRTAP4-9Q9BYQ8 210 aa7.68□□□□□ -1.18
USP44-207ENST00000552237 ZC3H7BQ9UGR2 993 aaKnown RBP7.68□□□□□ -1.18
USP44-207ENST00000552237 SLC5A6Q9Y289 635 aa7.68□□□□□ -1.18
USP44-207ENST00000552237 PDGFAP04085 211 aa7.67□□□□□ -1.18
USP44-207ENST00000552237 ADH5P11766 374 aa7.67□□□□□ -1.18
USP44-207ENST00000552237 COL19A1Q14993 1142 aa7.67□□□□□ -1.18
USP44-207ENST00000552237 PKN1Q16512 942 aa7.67□□□□□ -1.18
USP44-207ENST00000552237 ZNF648Q5T619 568 aaPredicted RBP7.67□□□□□ -1.18
USP44-207ENST00000552237 CLP1Q92989 425 aaKnown RBP7.67□□□□□ -1.18
USP44-207ENST00000552237 CHRDQ9H2X0 955 aa7.67□□□□□ -1.18
USP44-207ENST00000552237 PHACTR2O75167 634 aa7.66□□□□□ -1.18
USP44-207ENST00000552237 NFICP08651 508 aa7.66□□□□□ -1.18
USP44-207ENST00000552237 ESRRAP11474 423 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms