RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SUPT20HL1Q3ZLR7 823 aa18.09■□□□□ 0.49
CHMP1A-210ENST00000551981 ZNF804AQ7Z570 1209 aa18.09■□□□□ 0.49
CHMP1A-210ENST00000551981 IFNL1Q8IU54 200 aa18.09■□□□□ 0.49
CHMP1A-210ENST00000551981 R3HDMLQ9H3Y0 253 aa18.09■□□□□ 0.49
CHMP1A-210ENST00000551981 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-210ENST00000551981 A0A1B0GUL6 1792 aa18.09■□□□□ 0.49
CHMP1A-210ENST00000551981 IFIT5Q13325 482 aaKnown RBP18.08■□□□□ 0.48
CHMP1A-210ENST00000551981 C15orf52Q6ZUT6 534 aaKnown RBP18.08■□□□□ 0.48
CHMP1A-210ENST00000551981 WWC1Q8IX03 1113 aa18.08■□□□□ 0.48
CHMP1A-210ENST00000551981 WNK4Q96J92 1243 aa18.08■□□□□ 0.48
CHMP1A-210ENST00000551981 FZD1Q9UP38 647 aa18.08■□□□□ 0.48
CHMP1A-210ENST00000551981 IL16Q14005 1332 aa18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 F8W031 263 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 TAF5LO75529 589 aa18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 IREB2P48200 963 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 CFAP100Q494V2 611 aa18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 CERS5Q8N5B7 392 aa18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 CHMP3Q9Y3E7 222 aa18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 TRIM17Q9Y577 477 aa18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 SSC5DA1L4H1 1573 aa18.07■□□□□ 0.48
CHMP1A-210ENST00000551981 HTTP42858 3142 aa18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 IRS2Q9Y4H2 1338 aa18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 IL1R1P14778 569 aa18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 FKBP1AP62942 108 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 GCC1Q96CN9 775 aa18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 CLMNQ96JQ2 1002 aa18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 VEZTQ9HBM0 779 aa18.06■□□□□ 0.48
CHMP1A-210ENST00000551981 CLRN2A0PK11 232 aa18.05■□□□□ 0.48
CHMP1A-210ENST00000551981 OTOP1Q7RTM1 612 aa18.05■□□□□ 0.48
CHMP1A-210ENST00000551981 HELBQ8NG08 1087 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-210ENST00000551981 ERO1AQ96HE7 468 aa18.05■□□□□ 0.48
CHMP1A-210ENST00000551981 SNAP23O00161 211 aa18.04■□□□□ 0.48
CHMP1A-210ENST00000551981 IGF2BP3O00425 579 aaKnown RBP eCLIP18.04■□□□□ 0.48
CHMP1A-210ENST00000551981 RBM5P52756 815 aaKnown RBP eCLIP18.04■□□□□ 0.48
CHMP1A-210ENST00000551981 PRMT6Q96LA8 375 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-210ENST00000551981 FOXO4P98177 505 aa18.03■□□□□ 0.48
CHMP1A-210ENST00000551981 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
CHMP1A-210ENST00000551981 NBPF12Q5TAG4 269 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-210ENST00000551981 ANKRD13AQ8IZ07 590 aa18.03■□□□□ 0.48
CHMP1A-210ENST00000551981 PCDHAC2Q9Y5I4 1007 aa18.03■□□□□ 0.48
CHMP1A-210ENST00000551981 CENPFP49454 3210 aa18.02■□□□□ 0.48
CHMP1A-210ENST00000551981 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.48
CHMP1A-210ENST00000551981 RBBP6Q7Z6E9 1792 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-210ENST00000551981 TNFAIP1Q13829 316 aa18.02■□□□□ 0.48
CHMP1A-210ENST00000551981 RASA3Q14644 834 aa18.02■□□□□ 0.48
CHMP1A-210ENST00000551981 CCDC57Q2TAC2 916 aa18.02■□□□□ 0.48
CHMP1A-210ENST00000551981 NCBP3Q53F19 620 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-210ENST00000551981 CRHR2Q13324 411 aa18.01■□□□□ 0.47
CHMP1A-210ENST00000551981 LDHAL6AQ6ZMR3 332 aa18.01■□□□□ 0.47
CHMP1A-210ENST00000551981 CNNM1Q9NRU3 951 aa18.01■□□□□ 0.47
CHMP1A-210ENST00000551981 JAG2Q9Y219 1238 aa18.01■□□□□ 0.47
CHMP1A-210ENST00000551981 PTPN22Q9Y2R2 807 aa18.01■□□□□ 0.47
CHMP1A-210ENST00000551981 OTOFQ9HC10 1997 aa18■□□□□ 0.47
CHMP1A-210ENST00000551981 PLIN1O60240 522 aa18■□□□□ 0.47
CHMP1A-210ENST00000551981 USP2O75604 605 aaPredicted RBP18■□□□□ 0.47
CHMP1A-210ENST00000551981 LMBR1LQ6UX01 489 aa18■□□□□ 0.47
CHMP1A-210ENST00000551981 CD99L2Q8TCZ2 262 aa18■□□□□ 0.47
CHMP1A-210ENST00000551981 EFCC1Q9HA90 598 aa18■□□□□ 0.47
CHMP1A-210ENST00000551981 FAM205AQ6ZU69 1335 aa17.99■□□□□ 0.47
CHMP1A-210ENST00000551981 MKI67P46013 3256 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-210ENST00000551981 ARAP2Q8WZ64 1704 aa17.99■□□□□ 0.47
CHMP1A-210ENST00000551981 VAMP4O75379 141 aa17.99■□□□□ 0.47
CHMP1A-210ENST00000551981 SP3Q02447 781 aa17.99■□□□□ 0.47
CHMP1A-210ENST00000551981 BEND3Q5T5X7 828 aa17.99■□□□□ 0.47
CHMP1A-210ENST00000551981 SERPINA10Q9UK55 444 aa17.99■□□□□ 0.47
CHMP1A-210ENST00000551981 KIAA0100Q14667 2235 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 TESPA1A2RU30 521 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 GRM8O00222 908 aa17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 GJA5P36382 358 aa17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 ARHGEF6Q15052 776 aa17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 SPDYE2Q495Y8 402 aa17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 MFSD14BQ5SR56 506 aa17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 OPTNQ96CV9 577 aa17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 ZNF594Q96JF6 807 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 ELP3Q9H9T3 547 aa17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 ZNF70Q9UC06 446 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 TTF2Q9UNY4 1162 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 AOX1Q06278 1338 aa17.98■□□□□ 0.47
CHMP1A-210ENST00000551981 POTEFA5A3E0 1075 aa17.97■□□□□ 0.47
CHMP1A-210ENST00000551981 F6X3S4 739 aa17.97■□□□□ 0.47
CHMP1A-210ENST00000551981 WDR63Q8IWG1 891 aa17.97■□□□□ 0.47
CHMP1A-210ENST00000551981 ARMC5Q96C12 935 aa17.97■□□□□ 0.47
CHMP1A-210ENST00000551981 PTPN18Q99952 460 aa17.97■□□□□ 0.47
CHMP1A-210ENST00000551981 C9orf78Q9NZ63 289 aaPredicted RBP17.97■□□□□ 0.47
CHMP1A-210ENST00000551981 HIBADHP31937 336 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-210ENST00000551981 TNNI2P48788 182 aa17.96■□□□□ 0.47
CHMP1A-210ENST00000551981 EXOSC9Q06265 439 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-210ENST00000551981 UBE4AQ14139 1066 aa17.96■□□□□ 0.47
CHMP1A-210ENST00000551981 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
CHMP1A-210ENST00000551981 TDRD7Q8NHU6 1098 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-210ENST00000551981 BRCA2P51587 3418 aa17.96■□□□□ 0.47
CHMP1A-210ENST00000551981 EPHA10Q5JZY3 1008 aa17.95■□□□□ 0.46
CHMP1A-210ENST00000551981 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-210ENST00000551981 TDRD3Q9H7E2 651 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-210ENST00000551981 CSADQ9Y600 493 aa17.95■□□□□ 0.46
CHMP1A-210ENST00000551981 WDHD1O75717 1129 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms