RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 PHF20L1A8MW92 1017 aa9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 C21orf2O43822 256 aa9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 GDF11O95390 407 aa9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 LMOD1P29536 600 aaPredicted RBP9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 CRTC2Q53ET0 693 aaPredicted RBP9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 SH3PXD2AQ5TCZ1 1133 aa9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 C1orf229Q6ZS94 237 aaPredicted RBP9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 EDARADDQ8WWZ3 215 aa9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 FMN2Q9NZ56 1722 aa9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 TNS3Q68CZ2 1445 aa9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 PRAG1Q86YV5 1406 aa9.81□□□□□ -0.84
DEPDC4-210ENST00000551642 LRPPRCP42704 1394 aaKnown RBP9.8□□□□□ -0.84
DEPDC4-210ENST00000551642 COL24A1Q17RW2 1714 aa9.8□□□□□ -0.84
DEPDC4-210ENST00000551642 DCDC2BA2VCK2 349 aa9.8□□□□□ -0.84
DEPDC4-210ENST00000551642 KHNYNO15037 678 aaKnown RBP9.8□□□□□ -0.84
DEPDC4-210ENST00000551642 IRS1P35568 1242 aa9.8□□□□□ -0.84
DEPDC4-210ENST00000551642 MYOM3Q5VTT5 1437 aa9.8□□□□□ -0.84
DEPDC4-210ENST00000551642 SHISA8B8ZZ34 492 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L15C9J2P7 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L10C9JJH3 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L13C9JLJ4 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L12C9JPN9 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L11C9JVI0 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L21D6R901 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L18D6R9N7 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L22D6RA61 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L17D6RBQ6 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L19D6RCP7 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L20D6RJB6 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 USP17L24Q0WX57 530 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 CFAP70Q5T0N1 1121 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 PODNQ7Z5L7 613 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 ANKMY2Q8IV38 441 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 C2orf49Q9BVC5 232 aaPredicted RBP9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 MARK1Q9P0L2 795 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 GGA1Q9UJY5 639 aa9.79□□□□□ -0.84
DEPDC4-210ENST00000551642 PPP1R12BO60237 982 aaPredicted RBP9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 DPYDQ12882 1025 aa9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 KRT28Q7Z3Y7 464 aa9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 RHPN1Q8TCX5 695 aa9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 NEUROD4Q9HD90 331 aa9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 ANKIB1Q9P2G1 1089 aa9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 DNMT3AQ9Y6K1 912 aaPredicted RBP9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 CCDC144AA2RUR9 1427 aa9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 RRBP1Q9P2E9 1410 aaKnown RBP9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 SPATA31A1Q5TZJ5 1347 aa9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 CNTNAP5Q8WYK1 1306 aa9.78□□□□□ -0.84
DEPDC4-210ENST00000551642 ADCY9O60503 1353 aa9.77□□□□□ -0.84
DEPDC4-210ENST00000551642 TRPM3Q9HCF6 1732 aaPredicted RBP9.77□□□□□ -0.85
DEPDC4-210ENST00000551642 EPXP11678 715 aa9.77□□□□□ -0.85
DEPDC4-210ENST00000551642 CD33P20138 364 aa9.77□□□□□ -0.85
DEPDC4-210ENST00000551642 LRRC69Q6ZNQ3 347 aa9.77□□□□□ -0.85
DEPDC4-210ENST00000551642 ARXQ96QS3 562 aa9.77□□□□□ -0.85
DEPDC4-210ENST00000551642 PHACTR1Q9C0D0 580 aa9.77□□□□□ -0.85
DEPDC4-210ENST00000551642 HCN4Q9Y3Q4 1203 aa9.77□□□□□ -0.85
DEPDC4-210ENST00000551642 ALS2Q96Q42 1657 aa9.77□□□□□ -0.85
DEPDC4-210ENST00000551642 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
DEPDC4-210ENST00000551642 YBX3P16989 372 aaKnown RBP eCLIP9.76□□□□□ -0.85
DEPDC4-210ENST00000551642 ADH6P28332 368 aa9.76□□□□□ -0.85
DEPDC4-210ENST00000551642 ZNF468Q5VIY5 522 aaPredicted RBP9.76□□□□□ -0.85
DEPDC4-210ENST00000551642 PTF1AQ7RTS3 328 aa9.76□□□□□ -0.85
DEPDC4-210ENST00000551642 JMYQ8N9B5 988 aa9.76□□□□□ -0.85
DEPDC4-210ENST00000551642 MTFR1LQ9H019 292 aa9.76□□□□□ -0.85
DEPDC4-210ENST00000551642 TECPR2O15040 1411 aa9.75□□□□□ -0.85
DEPDC4-210ENST00000551642 IGFBP4P22692 258 aa9.75□□□□□ -0.85
DEPDC4-210ENST00000551642 HIF1AQ16665 826 aa9.75□□□□□ -0.85
DEPDC4-210ENST00000551642 ALDH16A1Q8IZ83 802 aa9.75□□□□□ -0.85
DEPDC4-210ENST00000551642 SCG3Q8WXD2 468 aaKnown RBP9.75□□□□□ -0.85
DEPDC4-210ENST00000551642 STRN4Q9NRL3 753 aa9.75□□□□□ -0.85
DEPDC4-210ENST00000551642 KLF15Q9UIH9 416 aa9.75□□□□□ -0.85
DEPDC4-210ENST00000551642 PARP4Q9UKK3 1724 aaKnown RBP9.75□□□□□ -0.85
DEPDC4-210ENST00000551642 DAPK1P53355 1430 aa9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 NAIPQ13075 1403 aa9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 IFT172Q9UG01 1749 aa9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 NEURL1BA8MQ27 555 aa9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 PLSCR1O15162 318 aa9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 ZNF526Q8TF50 670 aaPredicted RBP9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 HINFPQ9BQA5 517 aa9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 WWC3Q9ULE0 1092 aa9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 MKL2Q9ULH7 1088 aa9.74□□□□□ -0.85
DEPDC4-210ENST00000551642 TNS2Q63HR2 1409 aa9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 KCNQ4P56696 695 aa9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 SNRPNP63162 240 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 HTRA3P83110 453 aa9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 KCTD17Q8N5Z5 321 aa9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 NLGN2Q8NFZ4 835 aa9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 BTBD6Q96KE9 485 aa9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 PRR12Q9ULL5 1215 aa9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 SBNO1A3KN83 1393 aa9.73□□□□□ -0.85
DEPDC4-210ENST00000551642 SUSD3Q96L08 255 aa9.72□□□□□ -0.85
DEPDC4-210ENST00000551642 PAPPAQ13219 1627 aa9.71□□□□□ -0.85
DEPDC4-210ENST00000551642 ARHGEF28Q8N1W1 1705 aaKnown RBP9.71□□□□□ -0.85
DEPDC4-210ENST00000551642 SLC15A2Q16348 729 aa9.71□□□□□ -0.86
DEPDC4-210ENST00000551642 ALYREFQ86V81 257 aaKnown RBP9.71□□□□□ -0.86
DEPDC4-210ENST00000551642 FCHSD1Q86WN1 690 aa9.71□□□□□ -0.86
DEPDC4-210ENST00000551642 TOPAZ1Q8N9V7 1692 aa9.71□□□□□ -0.86
DEPDC4-210ENST00000551642 PIK3R2O00459 728 aa9.7□□□□□ -0.86
DEPDC4-210ENST00000551642 IGHA1P01876 353 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms