RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	ANKRD18A	Q8IVF6	992 aa		13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	SPATA5	Q8NB90	893 aa		13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	AGXT2	Q9BYV1	514 aa		13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	NYX	Q9GZU5	481 aa		13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	DDX49	Q9Y6V7	483 aa	Known RBP	13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	ZNF532	Q9HCE3	1301 aa		13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	ZPR1	O75312	459 aa		13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	IDH1	O75874	414 aa	Known RBP	13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	F13A1	P00488	732 aa		13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	HMGB1	P09429	215 aa	Known RBP	13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	DHX32	Q7L7V1	743 aa	Known RBP	13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	POTED	Q86YR6	584 aa		13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	CELF1	Q92879	486 aa	Known RBP	13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	GTF3C6	Q969F1	213 aa		13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	MTMR6	Q9Y217	621 aa		13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	ANKRD31	Q8N7Z5	1873 aa		13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	LRRC37A	A6NMS7	1700 aa		13.67	□□□□□ -0.22
RAB5C-208	ENST00000551338	ZNF804B	A4D1E1	1349 aa		13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	PRPF40A	O75400	957 aa	Known RBP	13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	BCAM	P50895	628 aa		13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	L1TD1	Q5T7N2	865 aa	Known RBP	13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	SLC9C2	Q5TAH2	1124 aa		13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	GPT2	Q8TD30	523 aa		13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	SETDB2	Q96T68	719 aa		13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	LRRC2	Q9BYS8	371 aa		13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	LRRC4B	Q9NT99	713 aa		13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	BSDC1	Q9NW68	430 aa	Predicted RBP	13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	CTNNA3	Q9UI47	895 aa		13.66	□□□□□ -0.22
RAB5C-208	ENST00000551338	GOLGA6L3	A6NEY3	463 aa		13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	FGA	P02671	866 aa		13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	STK3	Q13188	491 aa		13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	UBE4A	Q14139	1066 aa		13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	FAM196A	Q6ZSG2	479 aa		13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	TMEM87A	Q8NBN3	555 aa		13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	BRF1	Q92994	677 aa		13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	QTRT2	Q9H974	415 aa	Known RBP	13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	DLEC1	Q9Y238	1755 aa		13.65	□□□□□ -0.22
RAB5C-208	ENST00000551338	ZMYM6	O95789	1325 aa		13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	TNS1	Q9HBL0	1735 aa	Known RBP	13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	NRXN2	Q9P2S2	1712 aa		13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	CARMIL3	Q8ND23	1372 aa		13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	PHF14	O94880	888 aa		13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	GTF2E1	P29083	439 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	HAND2	P61296	217 aa		13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	IMMT	Q16891	758 aa	Known RBP	13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	NBPF3	Q9H094	633 aa		13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	MINPP1	Q9UNW1	487 aa		13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.64	□□□□□ -0.23
RAB5C-208	ENST00000551338	CDK5RAP2	Q96SN8	1893 aa		13.63	□□□□□ -0.23
RAB5C-208	ENST00000551338	MYH2	Q9UKX2	1941 aa		13.63	□□□□□ -0.23
RAB5C-208	ENST00000551338	PFKFB2	O60825	505 aa		13.63	□□□□□ -0.23
RAB5C-208	ENST00000551338	APOBR	Q0VD83	1088 aa		13.63	□□□□□ -0.23
RAB5C-208	ENST00000551338	GAS2L3	Q86XJ1	694 aa		13.63	□□□□□ -0.23
RAB5C-208	ENST00000551338	CCDC24	Q8N4L8	307 aa		13.63	□□□□□ -0.23
RAB5C-208	ENST00000551338	MAGEB6	Q8N7X4	407 aa		13.63	□□□□□ -0.23
RAB5C-208	ENST00000551338	NLRP3	Q96P20	1036 aa		13.63	□□□□□ -0.23
RAB5C-208	ENST00000551338	ISY1	Q9ULR0	285 aa	Known RBP	13.63	□□□□□ -0.23
RAB5C-208	ENST00000551338	LTBP1	Q14766	1721 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	WTIP	A6NIX2	430 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	JAK2	O60674	1132 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	MBD4	O95243	580 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	MBD3	O95983	291 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	ADRA2B	P18089	450 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	RFC4	P35249	363 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	GYG1	P46976	350 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	ANTXR2	P58335	489 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	SCRN1	Q12765	414 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	MAP3K12	Q12852	859 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	NFIX	Q14938	502 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	TRAPPC3L	Q5T215	181 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	CAVIN1	Q6NZI2	390 aa	Known RBP	13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	TPTE2	Q6XPS3	522 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	CDC37L1	Q7L3B6	337 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	FBXL16	Q8N461	479 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	SMARCC2	Q8TAQ2	1214 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	STRBP	Q96SI9	672 aa	Known RBP	13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	RBM27	Q9P2N5	1060 aa	Known RBP	13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	CNPY2	Q9Y2B0	182 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	RGPD4	Q7Z3J3	1758 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	MYH6	P13533	1939 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	WDR19	Q8NEZ3	1342 aa		13.62	□□□□□ -0.23
RAB5C-208	ENST00000551338	VPS37C	A5D8V6	355 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	PDC	P20941	246 aa		13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	TM4SF1	P30408	202 aa		13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	EVC	P57679	992 aa		13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	ZNF445	P59923	1031 aa		13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	RPS8	P62241	208 aa	Known RBP	13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	FGD1	P98174	961 aa		13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	ALX1	Q15699	326 aa		13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	LARP1B	Q659C4	914 aa	Known RBP	13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	CHST3	Q7LGC8	479 aa		13.61	□□□□□ -0.23

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