RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 IL1R1P14778 569 aa14.3□□□□□ -0.12
PRPF40B-213ENST00000551269 CHAF1AQ13111 956 aaPredicted RBP14.3□□□□□ -0.12
PRPF40B-213ENST00000551269 AOX1Q06278 1338 aa14.3□□□□□ -0.12
PRPF40B-213ENST00000551269 GLRX3O76003 335 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-213ENST00000551269 PRELPP51888 382 aa14.29□□□□□ -0.12
PRPF40B-213ENST00000551269 RASGRF1Q13972 1273 aa14.29□□□□□ -0.12
PRPF40B-213ENST00000551269 C16orf71Q8IYS4 520 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-213ENST00000551269 TDRD7Q8NHU6 1098 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-213ENST00000551269 OTUD7AQ8TE49 926 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-213ENST00000551269 PDS5AQ29RF7 1337 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-213ENST00000551269 USP17L3A6NCW0 530 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 USP17L4A6NCW7 530 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 MCAMP43121 646 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 GTF2IP78347 998 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 TSHZ3Q63HK5 1081 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 CIAPIN1Q6FI81 312 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 USP17L1Q7RTZ2 530 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 ZGPATQ8N5A5 531 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 ZNF512BQ96KM6 892 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 WDR90Q96KV7 1748 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 CDK5RAP2Q96SN8 1893 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 DNAJC2Q99543 621 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 SALL3Q9BXA9 1300 aa14.28□□□□□ -0.12
PRPF40B-213ENST00000551269 MYO3BQ8WXR4 1341 aa14.27□□□□□ -0.12
PRPF40B-213ENST00000551269 ZNF541Q9H0D2 1346 aa14.27□□□□□ -0.12
PRPF40B-213ENST00000551269 YDJCA8MPS7 323 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 RAD17O75943 681 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 ATP5JP18859 108 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 PDE1AP54750 535 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 TNIP1Q15025 636 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 STRIP1Q5VSL9 837 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 SPATA5Q8NB90 893 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 WDR66Q8TBY9 1149 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 BOLA2Q9H3K6 86 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 JAG2Q9Y219 1238 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 FOCADQ5VW36 1801 aa14.27□□□□□ -0.13
PRPF40B-213ENST00000551269 FAM205AQ6ZU69 1335 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 FZD9O00144 591 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 ZBTB22O15209 634 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 PDE4AP27815 886 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 RGS3P49796 1198 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 SCARF1Q14162 830 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 TTLL5Q6EMB2 1281 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 SNRKQ9NRH2 765 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 HMG20BQ9P0W2 317 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 GJA3Q9Y6H8 435 aa14.26□□□□□ -0.13
PRPF40B-213ENST00000551269 NAV1Q8NEY1 1877 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 PSMD14O00487 310 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 ZAP70P43403 619 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 TTF1Q15361 905 aaPredicted RBP14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 MFSD14BQ5SR56 506 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 PI16Q6UXB8 463 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 PLEKHM2Q8IWE5 1019 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 PI4K2BQ8TCG2 481 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 HAUS7Q99871 368 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 ABCF2Q9UG63 623 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 STAP2Q9UGK3 403 aa14.25□□□□□ -0.13
PRPF40B-213ENST00000551269 MAST3O60307 1309 aa14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 SALL1Q9NSC2 1324 aa14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 GOLIM4O00461 696 aa14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 FKBP1AP62942 108 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 CXCL9Q07325 125 aa14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 SPTY2D1Q68D10 685 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 DPY19L2Q6NUT2 758 aa14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 RSBN1LQ6PCB5 846 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 OSBPL3Q9H4L5 887 aa14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 PAG1Q9NWQ8 432 aa14.24□□□□□ -0.13
PRPF40B-213ENST00000551269 TRIM6-TRIM34B2RNG4 842 aa14.23□□□□□ -0.13
PRPF40B-213ENST00000551269 LDHBP07195 334 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-213ENST00000551269 RPS12P25398 132 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-213ENST00000551269 DACT2Q5SW24 774 aa14.23□□□□□ -0.13
PRPF40B-213ENST00000551269 DZIP1Q86YF9 867 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-213ENST00000551269 CNTROBQ8N137 903 aa14.23□□□□□ -0.13
PRPF40B-213ENST00000551269 GPC2Q8N158 579 aa14.23□□□□□ -0.13
PRPF40B-213ENST00000551269 LRP2BPQ9P2M1 347 aa14.23□□□□□ -0.13
PRPF40B-213ENST00000551269 NDUFB9Q9Y6M9 179 aa14.23□□□□□ -0.13
PRPF40B-213ENST00000551269 MAP4K4O95819 1239 aaPredicted RBP14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 LMOD1P29536 600 aaPredicted RBP14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 TTC22Q5TAA0 569 aa14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 ERICH6Q7L0X2 663 aa14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 AGBL3Q8NEM8 1001 aa14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 KCNQ5Q9NR82 932 aa14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 RAI14Q9P0K7 980 aa14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 HDAC9Q9UKV0 1011 aa14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 SUGT1Q9Y2Z0 365 aa14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 LAMB1P07942 1786 aa14.22□□□□□ -0.13
PRPF40B-213ENST00000551269 MYH1P12882 1939 aa14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 MYH8P13535 1937 aa14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 F8W031 263 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 IDH1O75874 414 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 CYP2E1P05181 493 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 VIL1P09327 827 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 PRDX5P30044 214 aa14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 MAP3K12Q12852 859 aa14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 LRRFIP1Q32MZ4 808 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 SKAP1Q86WV1 359 aa14.21□□□□□ -0.13
PRPF40B-213ENST00000551269 RILPL2Q969X0 211 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms