RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 DEFB115Q30KQ5 88 aa11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 CST9Q5W186 159 aa11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 RTFDC1Q9BY42 306 aaPredicted RBP11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 PNNQ9H307 717 aaKnown RBP11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 GPCPD1Q9NPB8 672 aa11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 GPRC5DQ9NZD1 345 aa11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 CHPF2Q9P2E5 772 aa11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 LAMB2P55268 1798 aa11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 THSD7BQ9C0I4 1608 aa11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 YDJCA8MPS7 323 aa11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 CHL1O00533 1208 aa11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 GRIPAP1Q4V328 841 aa11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 CYP4F22Q6NT55 531 aa11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 DPP8Q6V1X1 898 aaPredicted RBP11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 BABAM1Q9NWV8 329 aa11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 TRMT112Q9UI30 125 aaKnown RBP11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 ANKRD36CQ5JPF3 1778 aa11.39□□□□□ -0.59
ATP2B1-207ENST00000550716 RAD17O75943 681 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 HIRAP54198 1017 aaPredicted RBP11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 KIAA2012Q0VF49 1180 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 GRM1Q13255 1194 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 GRAPQ13588 217 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 RALBP1Q15311 655 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 DLK2Q6UY11 383 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 USP50Q70EL3 339 aaPredicted RBP11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 SP8Q8IXZ3 490 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 TRPM4Q8TD43 1214 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 CAPNS2Q96L46 248 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 GLIS2Q9BZE0 524 aaPredicted RBP11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 ZNRF3Q9ULT6 936 aa11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 LAS1LQ9Y4W2 734 aaKnown RBP11.38□□□□□ -0.59
ATP2B1-207ENST00000550716 SH3TC1Q8TE82 1336 aa11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 ATP5J2-PTCD1G3V325 749 aa11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 AOC2O75106 756 aa11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 CD46P15529 392 aa11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 DDX10Q13206 875 aaKnown RBP11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 HSP90AB3PQ58FF7 597 aa11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 MPNDQ8N594 471 aa11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 CELF1Q92879 486 aaKnown RBP11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 GPR101Q96P66 508 aaPredicted RBP11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 ADARB2Q9NS39 739 aaKnown RBP11.37□□□□□ -0.59
ATP2B1-207ENST00000550716 MYBBP1AQ9BQG0 1328 aaKnown RBP11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 TAF1P21675 1872 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 LRRC37AA6NMS7 1700 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 DDX60Q8IY21 1712 aaKnown RBP11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 TLL1O43897 1013 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 BBOX1O75936 387 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 GCGRP47871 477 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 FUT2Q10981 343 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 PUS10Q3MIT2 529 aaKnown RBP11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 HDGFL1Q5TGJ6 251 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 CIAPIN1Q6FI81 312 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 FAM89AQ96GI7 184 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 ISCA1Q9BUE6 129 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 ADAMTS8Q9UP79 889 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 TLL2Q9Y6L7 1015 aa11.36□□□□□ -0.59
ATP2B1-207ENST00000550716 CELF2O95319 508 aaKnown RBP11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 EGFRP00533 1210 aa11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 AMHR2Q16671 573 aa11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 SUPT20HQ8NEM7 779 aa11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 PLBD2Q8NHP8 589 aa11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 RUNDC1Q96C34 613 aa11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 REPIN1Q9BWE0 567 aaKnown RBP11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 VPS33BQ9H267 617 aa11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 FAM217BQ9NTX9 383 aaPredicted RBP11.35□□□□□ -0.59
ATP2B1-207ENST00000550716 GPSM2P81274 684 aa11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 MAP2K1Q02750 393 aaPredicted RBP11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 SAPCD2Q86UD0 394 aa11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 BCL2L13Q9BXK5 485 aa11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 DBNDD1Q9H9R9 158 aa11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 KCNQ5Q9NR82 932 aa11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 MBIPQ9NS73 344 aa11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 POLLQ9UGP5 575 aa11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 PGAP2Q9UHJ9 254 aa11.34□□□□□ -0.59
ATP2B1-207ENST00000550716 RTL9Q8NET4 1388 aa11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 PSMD14O00487 310 aa11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 NR1I2O75469 434 aa11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 DUSP27Q5VZP5 1158 aa11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 ABHD8Q96I13 439 aa11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 ZIC5Q96T25 663 aa11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 ZNF408Q9H9D4 720 aa11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 CNOT7Q9UIV1 285 aaKnown RBP11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 CDHR2Q9BYE9 1310 aa11.33□□□□□ -0.6
ATP2B1-207ENST00000550716 TRIM66O15016 1216 aa11.32□□□□□ -0.6
ATP2B1-207ENST00000550716 HOXB7P09629 217 aa11.32□□□□□ -0.6
ATP2B1-207ENST00000550716 WDR43Q15061 677 aaKnown RBP eCLIP11.32□□□□□ -0.6
ATP2B1-207ENST00000550716 JARID2Q92833 1246 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms