RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 PBX4Q9BYU1 374 aa8.48□□□□□ -1.05
HCFC2-204ENST00000550335 MUC3BQ9H195 1237 aa8.48□□□□□ -1.05
HCFC2-204ENST00000550335 ZNF408Q9H9D4 720 aa8.48□□□□□ -1.05
HCFC2-204ENST00000550335 DNAJB12Q9NXW2 375 aaKnown RBP8.48□□□□□ -1.05
HCFC2-204ENST00000550335 R3HCC1Q9Y3T6 440 aaKnown RBP8.48□□□□□ -1.05
HCFC2-204ENST00000550335 TLDC2A0PJX2 215 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 NFKBIEO00221 500 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 NRG2O14511 850 aaPredicted RBP8.47□□□□□ -1.05
HCFC2-204ENST00000550335 PAGE1O75459 146 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 ITGA6P23229 1130 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 MCM4P33991 863 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 ETFBP38117 255 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 FAAP100Q0VG06 881 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 FBXW10Q5XX13 1052 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 SYT9Q86SS6 491 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 NT5C1AQ9BXI3 368 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 CBX8Q9HC52 389 aa8.47□□□□□ -1.05
HCFC2-204ENST00000550335 ENC1O14682 589 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 SMNDC1O75940 238 aaKnown RBP eCLIP8.46□□□□□ -1.06
HCFC2-204ENST00000550335 RGS20O76081 388 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 TFE3P19532 575 aaPredicted RBP8.46□□□□□ -1.06
HCFC2-204ENST00000550335 ITPKAP23677 461 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 PPP2R3AQ06190 1150 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 SEZ6Q53EL9 994 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 PCNX4Q63HM2 1172 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 CCDC81Q6ZN84 652 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 ANKS3Q6ZW76 656 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 MRFAP1L1Q96HT8 127 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 RHOVQ96L33 236 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 POP1Q99575 1024 aaKnown RBP8.46□□□□□ -1.06
HCFC2-204ENST00000550335 TRIM55Q9BYV6 548 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 BHLHE41Q9C0J9 482 aaPredicted RBP8.46□□□□□ -1.06
HCFC2-204ENST00000550335 LACRTQ9GZZ8 138 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 ZNF576Q9H609 170 aa8.46□□□□□ -1.06
HCFC2-204ENST00000550335 ANKRD62A6NC57 917 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 FAM177BA6PVY3 158 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
HCFC2-204ENST00000550335 PCBP4P57723 403 aaKnown RBP8.45□□□□□ -1.06
HCFC2-204ENST00000550335 GPLD1P80108 840 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 LMNB2Q03252 620 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 FAM35AQ86V20 835 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 CRIPAKQ8N1N5 446 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 VWA5B2Q8N398 1253 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 TRPM4Q8TD43 1214 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 SENP2Q9HC62 589 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 TMEM39AQ9NV64 488 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 PCDHB5Q9Y5E4 795 aa8.45□□□□□ -1.06
HCFC2-204ENST00000550335 CCDC85CA6NKD9 419 aa8.44□□□□□ -1.06
HCFC2-204ENST00000550335 BMP4P12644 408 aa8.44□□□□□ -1.06
HCFC2-204ENST00000550335 CDK11BP21127 795 aaKnown RBP8.44□□□□□ -1.06
HCFC2-204ENST00000550335 PCSK7Q16549 785 aa8.44□□□□□ -1.06
HCFC2-204ENST00000550335 BNC2Q6ZN30 1099 aaPredicted RBP8.44□□□□□ -1.06
HCFC2-204ENST00000550335 AGMOQ6ZNB7 445 aa8.44□□□□□ -1.06
HCFC2-204ENST00000550335 FBXO27Q8NI29 283 aa8.44□□□□□ -1.06
HCFC2-204ENST00000550335 ANKRD24Q8TF21 1146 aa8.44□□□□□ -1.06
HCFC2-204ENST00000550335 GMCL1Q96IK5 515 aa8.44□□□□□ -1.06
HCFC2-204ENST00000550335 MIR1-1HGQ9H1L0 117 aa8.44□□□□□ -1.06
HCFC2-204ENST00000550335 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
HCFC2-204ENST00000550335 SAMM50Q9Y512 469 aa8.44□□□□□ -1.06
HCFC2-204ENST00000550335 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
HCFC2-204ENST00000550335 GREM1O60565 184 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 F13A1P00488 732 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 HOXD8P13378 290 aaPredicted RBP8.43□□□□□ -1.06
HCFC2-204ENST00000550335 GARTP22102 1010 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 CDC25BP30305 580 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 PCDH1Q08174 1060 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 NFE2L2Q16236 605 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 RPS26P11Q5JNZ5 115 aaPredicted RBP8.43□□□□□ -1.06
HCFC2-204ENST00000550335 ELMSAN1Q6PJG2 1045 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 BSNDQ8WZ55 320 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 KIFC2Q96AC6 838 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 PLD4Q96BZ4 506 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 SRRTQ9BXP5 876 aaKnown RBP8.43□□□□□ -1.06
HCFC2-204ENST00000550335 PPT2Q9UMR5 302 aa8.43□□□□□ -1.06
HCFC2-204ENST00000550335 NCLP19338 710 aaKnown RBP8.42□□□□□ -1.06
HCFC2-204ENST00000550335 CRKP46108 304 aa8.42□□□□□ -1.06
HCFC2-204ENST00000550335 SEPT6Q14141 434 aa8.42□□□□□ -1.06
HCFC2-204ENST00000550335 DIEXFQ68CQ4 756 aaKnown RBP8.42□□□□□ -1.06
HCFC2-204ENST00000550335 HNRNPLLQ8WVV9 542 aaKnown RBP8.42□□□□□ -1.06
HCFC2-204ENST00000550335 FERD3LQ96RJ6 166 aa8.42□□□□□ -1.06
HCFC2-204ENST00000550335 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
HCFC2-204ENST00000550335 CLEC4MQ9H2X3 399 aaPredicted RBP8.42□□□□□ -1.06
HCFC2-204ENST00000550335 STRIP2Q9ULQ0 834 aa8.42□□□□□ -1.06
HCFC2-204ENST00000550335 SOX9P48436 509 aa8.41□□□□□ -1.06
HCFC2-204ENST00000550335 COL9A2Q14055 689 aaPredicted RBP8.41□□□□□ -1.06
HCFC2-204ENST00000550335 FAM182BQ5T319 152 aa8.41□□□□□ -1.06
HCFC2-204ENST00000550335 SDE2Q6IQ49 451 aa8.41□□□□□ -1.06
HCFC2-204ENST00000550335 GDF6Q6KF10 455 aaPredicted RBP8.41□□□□□ -1.06
HCFC2-204ENST00000550335 ZNF662Q6ZS27 426 aa8.41□□□□□ -1.06
HCFC2-204ENST00000550335 FAM196AQ6ZSG2 479 aa8.41□□□□□ -1.06
HCFC2-204ENST00000550335 SV2AQ7L0J3 742 aa8.41□□□□□ -1.06
HCFC2-204ENST00000550335 SRPK1Q96SB4 655 aaKnown RBP8.41□□□□□ -1.06
HCFC2-204ENST00000550335 CRBNQ96SW2 442 aa8.41□□□□□ -1.06
HCFC2-204ENST00000550335 GMPR2Q9P2T1 348 aaKnown RBP8.41□□□□□ -1.06
HCFC2-204ENST00000550335 PTPRAP18433 802 aa8.4□□□□□ -1.06
HCFC2-204ENST00000550335 RPS26P62854 115 aaKnown RBP8.4□□□□□ -1.06
HCFC2-204ENST00000550335 ZNF423Q2M1K9 1284 aa8.4□□□□□ -1.06
HCFC2-204ENST00000550335 PERM1Q5SV97 790 aa8.4□□□□□ -1.06
HCFC2-204ENST00000550335 SULF2Q8IWU5 870 aa8.4□□□□□ -1.06
HCFC2-204ENST00000550335 TRIM42Q8IWZ5 723 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms