RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FBXW7Q969H0 707 aa12.61□□□□□ -0.39
TRAFD1-207ENST00000550051 DEFB129Q9H1M3 183 aa12.61□□□□□ -0.39
TRAFD1-207ENST00000550051 CD209Q9NNX6 404 aa12.61□□□□□ -0.39
TRAFD1-207ENST00000550051 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
TRAFD1-207ENST00000550051 MANSC4A6NHS7 340 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 KLRK1P26718 216 aa12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 DLGAP5Q15398 846 aa12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 LINS1Q8NG48 757 aa12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 SLC10A4Q96EP9 437 aa12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 R3HDMLQ9H3Y0 253 aa12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 ANGEL1Q9UNK9 670 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 PPP2R3BQ9Y5P8 575 aa12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 IL16Q14005 1332 aa12.6□□□□□ -0.39
TRAFD1-207ENST00000550051 COL1A1P02452 1464 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-207ENST00000550051 FKBP1AP62942 108 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-207ENST00000550051 CHRNDQ07001 517 aa12.59□□□□□ -0.39
TRAFD1-207ENST00000550051 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-207ENST00000550051 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
TRAFD1-207ENST00000550051 ANKRD18BA2A2Z9 1011 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 PPP1R12BO60237 982 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 ZBTB48P10074 688 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 IL1R1P14778 569 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 KCNJ4P48050 445 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 FLIIQ13045 1269 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 PRKG1Q13976 671 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 SUPT20HL1Q3ZLR7 823 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 CERS5Q8N5B7 392 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 DNAAF4Q8WXU2 420 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 LAMB1P07942 1786 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
TRAFD1-207ENST00000550051 FOXO4P98177 505 aa12.57□□□□□ -0.4
TRAFD1-207ENST00000550051 PRMT6Q96LA8 375 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-207ENST00000550051 SNAP23O00161 211 aa12.56□□□□□ -0.4
TRAFD1-207ENST00000550051 MYO1BO43795 1136 aa12.56□□□□□ -0.4
TRAFD1-207ENST00000550051 VAMP4O75379 141 aa12.56□□□□□ -0.4
TRAFD1-207ENST00000550051 IFIT5Q13325 482 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-207ENST00000550051 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-207ENST00000550051 WNK4Q96J92 1243 aa12.56□□□□□ -0.4
TRAFD1-207ENST00000550051 TESPA1A2RU30 521 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 TAF5LO75529 589 aa12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 USP2O75604 605 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 FKBP5Q13451 457 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 CFAP100Q494V2 611 aa12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 ZNF804AQ7Z570 1209 aa12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 CLMNQ96JQ2 1002 aa12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 FZD1Q9UP38 647 aa12.55□□□□□ -0.4
TRAFD1-207ENST00000550051 IGF2BP3O00425 579 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRAFD1-207ENST00000550051 NBPF12Q5TAG4 269 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-207ENST00000550051 OTUD7BQ6GQQ9 843 aa12.54□□□□□ -0.4
TRAFD1-207ENST00000550051 OTOP1Q7RTM1 612 aa12.54□□□□□ -0.4
TRAFD1-207ENST00000550051 PCDHAC2Q9Y5I4 1007 aa12.54□□□□□ -0.4
TRAFD1-207ENST00000550051 FAM205AQ6ZU69 1335 aa12.54□□□□□ -0.4
TRAFD1-207ENST00000550051 SSC5DA1L4H1 1573 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 IREB2P48200 963 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 RASA3Q14644 834 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 CCDC184Q52MB2 194 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 BEND3Q5T5X7 828 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 WDR63Q8IWG1 891 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 ANKRD13AQ8IZ07 590 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 GCC1Q96CN9 775 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 ERO1AQ96HE7 468 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 TRIM17Q9Y577 477 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
TRAFD1-207ENST00000550051 CLRN2A0PK11 232 aa12.52□□□□□ -0.41
TRAFD1-207ENST00000550051 F8W031 263 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-207ENST00000550051 CCDC57Q2TAC2 916 aa12.52□□□□□ -0.41
TRAFD1-207ENST00000550051 LMBR1LQ6UX01 489 aa12.52□□□□□ -0.41
TRAFD1-207ENST00000550051 TDRD7Q8NHU6 1098 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-207ENST00000550051 PTPN18Q99952 460 aa12.52□□□□□ -0.41
TRAFD1-207ENST00000550051 PTPN22Q9Y2R2 807 aa12.52□□□□□ -0.41
TRAFD1-207ENST00000550051 GJA5P36382 358 aa12.51□□□□□ -0.41
TRAFD1-207ENST00000550051 CRHR2Q13324 411 aa12.51□□□□□ -0.41
TRAFD1-207ENST00000550051 UBE4AQ14139 1066 aa12.51□□□□□ -0.41
TRAFD1-207ENST00000550051 EPHA10Q5JZY3 1008 aa12.51□□□□□ -0.41
TRAFD1-207ENST00000550051 ARMC5Q96C12 935 aa12.51□□□□□ -0.41
TRAFD1-207ENST00000550051 SERPINA10Q9UK55 444 aa12.51□□□□□ -0.41
TRAFD1-207ENST00000550051 FANCIQ9NVI1 1328 aa12.51□□□□□ -0.41
TRAFD1-207ENST00000550051 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 F6X3S4 739 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 GRM8O00222 908 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 RBM5P52756 815 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 SP3Q02447 781 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 ZNF594Q96JF6 807 aaPredicted RBP12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 VEZTQ9HBM0 779 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 CNNM1Q9NRU3 951 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 ZNF70Q9UC06 446 aaPredicted RBP12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 CHMP3Q9Y3E7 222 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 AOX1Q06278 1338 aa12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 RBBP6Q7Z6E9 1792 aaKnown RBP12.5□□□□□ -0.41
TRAFD1-207ENST00000550051 PLIN1O60240 522 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms