RNA–Protein interactions for RNA: ENST00000549917.1

PPFIA2-217, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-217ENST00000549917 KCNK4Q9NYG8 393 aa9.13□□□□□ -0.95
PPFIA2-217ENST00000549917 TMEM238LA0A1B0GVL6 79 aa9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 SOX1O00570 391 aaPredicted RBP9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 FSCN2O14926 492 aa9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 PRPF40AO75400 957 aaKnown RBP9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 CD163Q86VB7 1156 aa9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 NLRP2Q9NX02 1062 aa9.12□□□□□ -0.95
PPFIA2-217ENST00000549917 ADAM11O75078 769 aa9.11□□□□□ -0.95
PPFIA2-217ENST00000549917 ESRRAP11474 423 aaPredicted RBP9.11□□□□□ -0.95
PPFIA2-217ENST00000549917 ZNF423Q2M1K9 1284 aa9.11□□□□□ -0.95
PPFIA2-217ENST00000549917 KLHDC7BQ96G42 594 aa9.11□□□□□ -0.95
PPFIA2-217ENST00000549917 SRA1Q9HD15 236 aaKnown RBP9.11□□□□□ -0.95
PPFIA2-217ENST00000549917 C1QTNF9BB2RNN3 333 aa9.1□□□□□ -0.95
PPFIA2-217ENST00000549917 ERCC3P19447 782 aa9.1□□□□□ -0.95
PPFIA2-217ENST00000549917 ATP2B2Q01814 1243 aa9.1□□□□□ -0.95
PPFIA2-217ENST00000549917 MAP4K3Q8IVH8 894 aa9.1□□□□□ -0.95
PPFIA2-217ENST00000549917 C3orf58Q8NDZ4 430 aa9.1□□□□□ -0.95
PPFIA2-217ENST00000549917 DUSP9Q99956 384 aaKnown RBP9.1□□□□□ -0.95
PPFIA2-217ENST00000549917 CLEC4MQ9H2X3 399 aaPredicted RBP9.1□□□□□ -0.95
PPFIA2-217ENST00000549917 TRAK1Q9UPV9 953 aa9.1□□□□□ -0.95
PPFIA2-217ENST00000549917 DDX3YO15523 660 aaKnown RBP9.09□□□□□ -0.95
PPFIA2-217ENST00000549917 PIP4K2BP78356 416 aa9.09□□□□□ -0.95
PPFIA2-217ENST00000549917 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
PPFIA2-217ENST00000549917 FAAP100Q0VG06 881 aa9.09□□□□□ -0.95
PPFIA2-217ENST00000549917 FOXD4L4Q8WXT5 416 aaPredicted RBP9.09□□□□□ -0.95
PPFIA2-217ENST00000549917 SEC31BQ9NQW1 1179 aa9.09□□□□□ -0.95
PPFIA2-217ENST00000549917 WISP1O95388 367 aa9.08□□□□□ -0.96
PPFIA2-217ENST00000549917 FCGRTP55899 365 aa9.08□□□□□ -0.96
PPFIA2-217ENST00000549917 CABP4P57796 275 aa9.08□□□□□ -0.96
PPFIA2-217ENST00000549917 PCDH1Q08174 1060 aa9.08□□□□□ -0.96
PPFIA2-217ENST00000549917 IKBKEQ14164 716 aa9.08□□□□□ -0.96
PPFIA2-217ENST00000549917 SLC7A3Q8WY07 619 aa9.08□□□□□ -0.96
PPFIA2-217ENST00000549917 WNT8BQ93098 351 aa9.08□□□□□ -0.96
PPFIA2-217ENST00000549917 LENG1Q96BZ8 264 aaPredicted RBP9.08□□□□□ -0.96
PPFIA2-217ENST00000549917 GNA15P30679 374 aa9.07□□□□□ -0.96
PPFIA2-217ENST00000549917 IGF2-ASQ6U949 168 aa9.07□□□□□ -0.96
PPFIA2-217ENST00000549917 NRSN2Q9GZP1 204 aa9.07□□□□□ -0.96
PPFIA2-217ENST00000549917 C12orf49Q9H741 205 aa9.07□□□□□ -0.96
PPFIA2-217ENST00000549917 OSGEPQ9NPF4 335 aa9.07□□□□□ -0.96
PPFIA2-217ENST00000549917 FAM177BA6PVY3 158 aa9.06□□□□□ -0.96
PPFIA2-217ENST00000549917 B3GALT4O96024 378 aa9.06□□□□□ -0.96
PPFIA2-217ENST00000549917 CD68P34810 354 aaPredicted RBP9.06□□□□□ -0.96
PPFIA2-217ENST00000549917 ADGRE1Q14246 886 aa9.06□□□□□ -0.96
PPFIA2-217ENST00000549917 MBTPS1Q14703 1052 aa9.06□□□□□ -0.96
PPFIA2-217ENST00000549917 FAM117BQ6P1L5 589 aa9.06□□□□□ -0.96
PPFIA2-217ENST00000549917 KLHL23Q8NBE8 558 aa9.06□□□□□ -0.96
PPFIA2-217ENST00000549917 SOX17Q9H6I2 414 aaPredicted RBP9.06□□□□□ -0.96
PPFIA2-217ENST00000549917 PARP2Q9UGN5 583 aa9.06□□□□□ -0.96
PPFIA2-217ENST00000549917 PROCP04070 461 aa9.05□□□□□ -0.96
PPFIA2-217ENST00000549917 C19orf57Q0VDD7 668 aa9.05□□□□□ -0.96
PPFIA2-217ENST00000549917 UBASH3BQ8TF42 649 aa9.05□□□□□ -0.96
PPFIA2-217ENST00000549917 FAM161BQ96MY7 647 aa9.05□□□□□ -0.96
PPFIA2-217ENST00000549917 SPG7Q9UQ90 795 aa9.05□□□□□ -0.96
PPFIA2-217ENST00000549917 DAB2P98082 770 aa9.04□□□□□ -0.96
PPFIA2-217ENST00000549917 SUZ12Q15022 739 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-217ENST00000549917 RPS26P11Q5JNZ5 115 aaPredicted RBP9.04□□□□□ -0.96
PPFIA2-217ENST00000549917 DTHD1Q6ZMT9 781 aa9.04□□□□□ -0.96
PPFIA2-217ENST00000549917 NACC1Q96RE7 527 aa9.04□□□□□ -0.96
PPFIA2-217ENST00000549917 TRIM56Q9BRZ2 755 aaKnown RBP9.04□□□□□ -0.96
PPFIA2-217ENST00000549917 SRCIN1Q9C0H9 1055 aa9.04□□□□□ -0.96
PPFIA2-217ENST00000549917 C9orf172C9J069 976 aa9.03□□□□□ -0.96
PPFIA2-217ENST00000549917 GIPC1O14908 333 aa9.03□□□□□ -0.96
PPFIA2-217ENST00000549917 APBA3O96018 575 aa9.03□□□□□ -0.96
PPFIA2-217ENST00000549917 NLRP12P59046 1061 aa9.03□□□□□ -0.96
PPFIA2-217ENST00000549917 KIAA1211Q6ZU35 1233 aa9.03□□□□□ -0.96
PPFIA2-217ENST00000549917 GIPC2Q8TF65 315 aa9.03□□□□□ -0.96
PPFIA2-217ENST00000549917 BCL2L13Q9BXK5 485 aa9.03□□□□□ -0.96
PPFIA2-217ENST00000549917 F8W735 103 aaPredicted RBP9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 ALX3O95076 343 aa9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 DLGAP3O95886 979 aa9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 CTSBP07858 339 aa9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 USP17L7P0C7H9 530 aa9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 NOS3P29474 1203 aa9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 AGGF1Q8N302 714 aaeCLIP9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 FRMD6Q96NE9 622 aa9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 SPOCK3Q9BQ16 436 aa9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 MRPL18Q9H0U6 180 aaKnown RBP9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 FAM8A1Q9UBU6 413 aa9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 AK5Q9Y6K8 562 aa9.02□□□□□ -0.97
PPFIA2-217ENST00000549917 ECEL1O95672 775 aa9.01□□□□□ -0.97
PPFIA2-217ENST00000549917 XRCC5P13010 732 aaKnown RBP9.01□□□□□ -0.97
PPFIA2-217ENST00000549917 GSTT1P30711 240 aa9.01□□□□□ -0.97
PPFIA2-217ENST00000549917 ZNF157P51786 506 aaPredicted RBP9.01□□□□□ -0.97
PPFIA2-217ENST00000549917 GSTM4Q03013 218 aa9.01□□□□□ -0.97
PPFIA2-217ENST00000549917 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
PPFIA2-217ENST00000549917 TMEM130Q8N3G9 435 aa9.01□□□□□ -0.97
PPFIA2-217ENST00000549917 RGS22Q8NE09 1264 aa9.01□□□□□ -0.97
PPFIA2-217ENST00000549917 USP21Q9UK80 565 aa9.01□□□□□ -0.97
PPFIA2-217ENST00000549917 LOC100289279A0A1B0GTE1 492 aa9□□□□□ -0.97
PPFIA2-217ENST00000549917 CTSHP09668 335 aa9□□□□□ -0.97
PPFIA2-217ENST00000549917 ZNF16P17020 682 aaPredicted RBP9□□□□□ -0.97
PPFIA2-217ENST00000549917 ARL4DP49703 201 aa9□□□□□ -0.97
PPFIA2-217ENST00000549917 NRG1Q02297 640 aaPredicted RBP9□□□□□ -0.97
PPFIA2-217ENST00000549917 GPAT2Q6NUI2 795 aa9□□□□□ -0.97
PPFIA2-217ENST00000549917 Q6ZS46 218 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms