RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 FKBP1BP68106 108 aa9.03□□□□□ -0.96
PTCH1-219ENST00000549678 UBE4AQ14139 1066 aa9.03□□□□□ -0.96
PTCH1-219ENST00000549678 RBM26Q5T8P6 1007 aaKnown RBP9.03□□□□□ -0.96
PTCH1-219ENST00000549678 OGFOD1Q8N543 542 aa9.03□□□□□ -0.96
PTCH1-219ENST00000549678 C2orf69Q8N8R5 385 aa9.03□□□□□ -0.96
PTCH1-219ENST00000549678 PANK1Q8TE04 598 aa9.03□□□□□ -0.96
PTCH1-219ENST00000549678 CCDC102AQ96A19 550 aa9.03□□□□□ -0.96
PTCH1-219ENST00000549678 CHMP4BQ9H444 224 aaKnown RBP9.03□□□□□ -0.96
PTCH1-219ENST00000549678 ZNF408Q9H9D4 720 aa9.03□□□□□ -0.96
PTCH1-219ENST00000549678 GBA2Q9HCG7 927 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-219ENST00000549678 KCNQ5Q9NR82 932 aa9.03□□□□□ -0.96
PTCH1-219ENST00000549678 HDAC9Q9UKV0 1011 aa9.03□□□□□ -0.96
PTCH1-219ENST00000549678 WTIPA6NIX2 430 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-219ENST00000549678 PDE8BO95263 885 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 KLRK1P26718 216 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 HIBADHP31937 336 aaKnown RBP9.02□□□□□ -0.97
PTCH1-219ENST00000549678 GTF2IP78347 998 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 PUM3Q15397 648 aaKnown RBP9.02□□□□□ -0.97
PTCH1-219ENST00000549678 TTLL5Q6EMB2 1281 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 REM2Q8IYK8 340 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-219ENST00000549678 C1orf115Q9H7X2 142 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 CD209Q9NNX6 404 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 MYOZ2Q9NPC6 264 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 GGA3Q9NZ52 723 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 DDX19BQ9UMR2 479 aa9.02□□□□□ -0.97
PTCH1-219ENST00000549678 EGFRP00533 1210 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 IL15P40933 162 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-219ENST00000549678 GYG1P46976 350 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 PTPN12Q05209 780 aaKnown RBP9.01□□□□□ -0.97
PTCH1-219ENST00000549678 CHAF1AQ13111 956 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-219ENST00000549678 GRM1Q13255 1194 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 G3BP1Q13283 466 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTCH1-219ENST00000549678 SCARF1Q14162 830 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 DACT2Q5SW24 774 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 RGMBQ6NW40 437 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 C15orf52Q6ZUT6 534 aaKnown RBP9.01□□□□□ -0.97
PTCH1-219ENST00000549678 TXNRD3Q86VQ6 643 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 FBXO3Q9UK99 471 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 PA2G4Q9UQ80 394 aaKnown RBP9.01□□□□□ -0.97
PTCH1-219ENST00000549678 JAG2Q9Y219 1238 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 COG6Q9Y2V7 657 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 RIPOR2Q9Y4F9 1068 aa9.01□□□□□ -0.97
PTCH1-219ENST00000549678 ARAP2Q8WZ64 1704 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 ADM5C9JUS6 153 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 F8W031 263 aaPredicted RBP9□□□□□ -0.97
PTCH1-219ENST00000549678 AOC2O75106 756 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 CIAO1O76071 339 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 RLBP1P12271 317 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 RFX5P48382 616 aaPredicted RBP9□□□□□ -0.97
PTCH1-219ENST00000549678 MVPQ14764 893 aaKnown RBP9□□□□□ -0.97
PTCH1-219ENST00000549678 ATP2B3Q16720 1220 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 GORABQ5T7V8 394 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 KIAA0825Q8IV33 1275 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 CDCA5Q96FF9 252 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 COPRSQ9NQ92 184 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 GNL3LQ9NVN8 582 aaKnown RBP9□□□□□ -0.97
PTCH1-219ENST00000549678 SAGE1Q9NXZ1 904 aa9□□□□□ -0.97
PTCH1-219ENST00000549678 IQSEC3Q9UPP2 1182 aaPredicted RBP9□□□□□ -0.97
PTCH1-219ENST00000549678 PDE4DIPQ5VU43 2346 aa8.99□□□□□ -0.97
PTCH1-219ENST00000549678 CAPN15O75808 1086 aa8.99□□□□□ -0.97
PTCH1-219ENST00000549678 ZNF157P51786 506 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-219ENST00000549678 RBM5P52756 815 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTCH1-219ENST00000549678 FKBP1AP62942 108 aaKnown RBP8.99□□□□□ -0.97
PTCH1-219ENST00000549678 ANGEL2Q5VTE6 544 aaKnown RBP8.99□□□□□ -0.97
PTCH1-219ENST00000549678 APOBEC3FQ8IUX4 373 aaKnown RBP8.99□□□□□ -0.97
PTCH1-219ENST00000549678 LPIN2Q92539 896 aa8.99□□□□□ -0.97
PTCH1-219ENST00000549678 NEUROD6Q96NK8 337 aa8.99□□□□□ -0.97
PTCH1-219ENST00000549678 MXD3Q9BW11 206 aa8.99□□□□□ -0.97
PTCH1-219ENST00000549678 BCL11AQ9H165 835 aa8.99□□□□□ -0.97
PTCH1-219ENST00000549678 AKAP2Q9Y2D5 859 aa8.99□□□□□ -0.97
PTCH1-219ENST00000549678 ZNF646O15015 1829 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-219ENST00000549678 PNMA6EA0A0J9YXQ4 647 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 FAM155AB1AL88 458 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-219ENST00000549678 WNT10BO00744 389 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 ZBTB7BO15156 539 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-219ENST00000549678 MYO1BO43795 1136 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 HMMRO75330 724 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 SURF6O75683 361 aaKnown RBP8.98□□□□□ -0.97
PTCH1-219ENST00000549678 SLC10A3P09131 477 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 IL1R1P14778 569 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 NF2P35240 595 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 MTX1Q13505 466 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 PDE3AQ14432 1141 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 MFSD14BQ5SR56 506 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 ATG9AQ7Z3C6 839 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 PAPPA2Q9BXP8 1791 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 ECM29Q5VYK3 1845 aa8.98□□□□□ -0.97
PTCH1-219ENST00000549678 COL1A1P02452 1464 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-219ENST00000549678 ATP8B2P98198 1209 aa8.97□□□□□ -0.97
PTCH1-219ENST00000549678 TFCP2Q12800 502 aa8.97□□□□□ -0.97
PTCH1-219ENST00000549678 DLK2Q6UY11 383 aa8.97□□□□□ -0.97
PTCH1-219ENST00000549678 VGLL2Q8N8G2 317 aa8.97□□□□□ -0.97
PTCH1-219ENST00000549678 MTMR14Q8NCE2 650 aa8.97□□□□□ -0.97
PTCH1-219ENST00000549678 TBC1D22AQ8WUA7 517 aa8.97□□□□□ -0.97
PTCH1-219ENST00000549678 ABHD8Q96I13 439 aa8.97□□□□□ -0.97
PTCH1-219ENST00000549678 FAM84BQ96KN1 310 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-219ENST00000549678 ASTN2O75129 1339 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-219ENST00000549678 IRS2Q9Y4H2 1338 aa8.97□□□□□ -0.97
PTCH1-219ENST00000549678 CASP8AP2Q9UKL3 1982 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms