RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ZNF532Q9HCE3 1301 aa22.75■■□□□ 1.23
BRF1-215ENST00000549655 SLC27A3Q5K4L6 730 aa22.74■■□□□ 1.23
BRF1-215ENST00000549655 Q6ZUG5 572 aa22.74■■□□□ 1.23
BRF1-215ENST00000549655 LAMA4Q16363 1823 aa22.74■■□□□ 1.23
BRF1-215ENST00000549655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.74■■□□□ 1.23
BRF1-215ENST00000549655 NPHP1O15259 732 aa22.74■■□□□ 1.23
BRF1-215ENST00000549655 FGAP02671 866 aa22.74■■□□□ 1.23
BRF1-215ENST00000549655 RPS8P62241 208 aaKnown RBP22.74■■□□□ 1.23
BRF1-215ENST00000549655 UBE4AQ14139 1066 aa22.74■■□□□ 1.23
BRF1-215ENST00000549655 DHX32Q7L7V1 743 aaKnown RBP22.74■■□□□ 1.23
BRF1-215ENST00000549655 A0A1B0GUL6 1792 aa22.74■■□□□ 1.23
BRF1-215ENST00000549655 TCRBV5S4A2TA0A5A2 114 aa22.73■■□□□ 1.23
BRF1-215ENST00000549655 GJB2P29033 226 aa22.73■■□□□ 1.23
BRF1-215ENST00000549655 NFIXQ14938 502 aa22.73■■□□□ 1.23
BRF1-215ENST00000549655 CARMIL3Q8ND23 1372 aa22.73■■□□□ 1.23
BRF1-215ENST00000549655 MAP3K12Q12852 859 aa22.72■■□□□ 1.23
BRF1-215ENST00000549655 IMMTQ16891 758 aaKnown RBP22.72■■□□□ 1.23
BRF1-215ENST00000549655 CHAMP1Q96JM3 812 aa22.72■■□□□ 1.23
BRF1-215ENST00000549655 WTIPA6NIX2 430 aaPredicted RBP22.72■■□□□ 1.23
BRF1-215ENST00000549655 SYT1P21579 422 aa22.72■■□□□ 1.23
BRF1-215ENST00000549655 EP400Q96L91 3159 aa22.72■■□□□ 1.23
BRF1-215ENST00000549655 UBR3Q6ZT12 1888 aa22.71■■□□□ 1.23
BRF1-215ENST00000549655 DOCK2Q92608 1830 aa22.71■■□□□ 1.23
BRF1-215ENST00000549655 STX6O43752 255 aa22.71■■□□□ 1.23
BRF1-215ENST00000549655 LRRC2Q9BYS8 371 aa22.71■■□□□ 1.23
BRF1-215ENST00000549655 LMBRD1Q9NUN5 540 aa22.71■■□□□ 1.23
BRF1-215ENST00000549655 ZNF804BA4D1E1 1349 aa22.71■■□□□ 1.23
BRF1-215ENST00000549655 DTNBO60941 627 aa22.7■■□□□ 1.23
BRF1-215ENST00000549655 GYG1P46976 350 aa22.7■■□□□ 1.23
BRF1-215ENST00000549655 HAND2P61296 217 aa22.7■■□□□ 1.23
BRF1-215ENST00000549655 FGD1P98174 961 aa22.7■■□□□ 1.23
BRF1-215ENST00000549655 EXOSC10Q01780 885 aaKnown RBP22.7■■□□□ 1.23
BRF1-215ENST00000549655 MAGEB6Q8N7X4 407 aa22.7■■□□□ 1.23
BRF1-215ENST00000549655 TM4SF1P30408 202 aa22.7■■□□□ 1.22
BRF1-215ENST00000549655 STK3Q13188 491 aa22.7■■□□□ 1.22
BRF1-215ENST00000549655 BRF1Q92994 677 aa22.69■■□□□ 1.22
BRF1-215ENST00000549655 GNL3LQ9NVN8 582 aaKnown RBP22.69■■□□□ 1.22
BRF1-215ENST00000549655 IQSEC3Q9UPP2 1182 aaPredicted RBP22.69■■□□□ 1.22
BRF1-215ENST00000549655 PRPF40AO75400 957 aaKnown RBP22.69■■□□□ 1.22
BRF1-215ENST00000549655 ZSCAN22P10073 491 aaPredicted RBP22.69■■□□□ 1.22
BRF1-215ENST00000549655 CAVIN4Q5BKX8 364 aa22.69■■□□□ 1.22
BRF1-215ENST00000549655 CNBD1Q8NA66 436 aa22.69■■□□□ 1.22
BRF1-215ENST00000549655 AIDAQ96BJ3 306 aa22.69■■□□□ 1.22
BRF1-215ENST00000549655 DDX49Q9Y6V7 483 aaKnown RBP22.69■■□□□ 1.22
BRF1-215ENST00000549655 STRBPQ96SI9 672 aaKnown RBP22.68■■□□□ 1.22
BRF1-215ENST00000549655 TNRC6CQ9HCJ0 1690 aaKnown RBP22.67■■□□□ 1.22
BRF1-215ENST00000549655 ZNF213O14771 459 aa22.67■■□□□ 1.22
BRF1-215ENST00000549655 GYS1P13807 737 aa22.67■■□□□ 1.22
BRF1-215ENST00000549655 RBM6P78332 1123 aaKnown RBP22.67■■□□□ 1.22
BRF1-215ENST00000549655 KLHL40Q2TBA0 621 aa22.67■■□□□ 1.22
BRF1-215ENST00000549655 APPP05067 770 aa22.67■■□□□ 1.22
BRF1-215ENST00000549655 VPS37DQ86XT2 251 aa22.67■■□□□ 1.22
BRF1-215ENST00000549655 GTF3C6Q969F1 213 aa22.67■■□□□ 1.22
BRF1-215ENST00000549655 AGXT2Q9BYV1 514 aa22.67■■□□□ 1.22
BRF1-215ENST00000549655 ANKRD2Q9GZV1 360 aa22.67■■□□□ 1.22
BRF1-215ENST00000549655 LRP2BPQ9P2M1 347 aa22.67■■□□□ 1.22
BRF1-215ENST00000549655 ZNF772Q68DY9 489 aaPredicted RBP22.66■■□□□ 1.22
BRF1-215ENST00000549655 FAM84BQ96KN1 310 aaPredicted RBP22.66■■□□□ 1.22
BRF1-215ENST00000549655 FOXD4L6Q3SYB3 417 aaPredicted RBP22.65■■□□□ 1.22
BRF1-215ENST00000549655 FOXD4L3Q6VB84 417 aaPredicted RBP22.65■■□□□ 1.22
BRF1-215ENST00000549655 CHST3Q7LGC8 479 aa22.65■■□□□ 1.22
BRF1-215ENST00000549655 MBD4O95243 580 aa22.65■■□□□ 1.22
BRF1-215ENST00000549655 TXNRD1Q16881 649 aa22.65■■□□□ 1.22
BRF1-215ENST00000549655 PROM2Q8N271 834 aa22.65■■□□□ 1.22
BRF1-215ENST00000549655 F13A1P00488 732 aa22.64■■□□□ 1.21
BRF1-215ENST00000549655 PRR5LQ6MZQ0 368 aa22.64■■□□□ 1.21
BRF1-215ENST00000549655 MTMR6Q9Y217 621 aa22.64■■□□□ 1.21
BRF1-215ENST00000549655 APOBRQ0VD83 1088 aa22.63■■□□□ 1.21
BRF1-215ENST00000549655 LARP1BQ659C4 914 aaKnown RBP22.63■■□□□ 1.21
BRF1-215ENST00000549655 FBXO33Q7Z6M2 555 aa22.63■■□□□ 1.21
BRF1-215ENST00000549655 COL1A1P02452 1464 aaPredicted RBP22.63■■□□□ 1.21
BRF1-215ENST00000549655 KLRK1P26718 216 aa22.63■■□□□ 1.21
BRF1-215ENST00000549655 NCOA7Q8NI08 942 aa22.63■■□□□ 1.21
BRF1-215ENST00000549655 ARMT1Q9H993 441 aa22.63■■□□□ 1.21
BRF1-215ENST00000549655 ABCF2Q9UG63 623 aa22.63■■□□□ 1.21
BRF1-215ENST00000549655 DENND2AQ9ULE3 1009 aa22.63■■□□□ 1.21
BRF1-215ENST00000549655 PATL2C9JE40 543 aaKnown RBP22.62■■□□□ 1.21
BRF1-215ENST00000549655 PFKFB2O60825 505 aa22.62■■□□□ 1.21
BRF1-215ENST00000549655 PDIA4P13667 645 aaKnown RBP22.62■■□□□ 1.21
BRF1-215ENST00000549655 PDCP20941 246 aa22.62■■□□□ 1.21
BRF1-215ENST00000549655 SCRN1Q12765 414 aa22.62■■□□□ 1.21
BRF1-215ENST00000549655 ALX1Q15699 326 aa22.62■■□□□ 1.21
BRF1-215ENST00000549655 MB21D2Q8IYB1 491 aaPredicted RBP22.62■■□□□ 1.21
BRF1-215ENST00000549655 FBXL16Q8N461 479 aa22.62■■□□□ 1.21
BRF1-215ENST00000549655 NBPF3Q9H094 633 aa22.62■■□□□ 1.21
BRF1-215ENST00000549655 MCM5P33992 734 aa22.61■■□□□ 1.21
BRF1-215ENST00000549655 GRAPQ13588 217 aa22.61■■□□□ 1.21
BRF1-215ENST00000549655 RALYLQ86SE5 291 aaKnown RBP22.61■■□□□ 1.21
BRF1-215ENST00000549655 GRAPLQ8TC17 118 aaPredicted RBP22.61■■□□□ 1.21
BRF1-215ENST00000549655 VPS37CA5D8V6 355 aaPredicted RBP22.61■■□□□ 1.21
BRF1-215ENST00000549655 SERPINB2P05120 415 aa22.61■■□□□ 1.21
BRF1-215ENST00000549655 NCLP19338 710 aaKnown RBP22.61■■□□□ 1.21
BRF1-215ENST00000549655 ATP6V1DQ9Y5K8 247 aa22.61■■□□□ 1.21
BRF1-215ENST00000549655 PRC1O43663 620 aa22.6■■□□□ 1.21
BRF1-215ENST00000549655 HMGB2P26583 209 aaKnown RBP22.6■■□□□ 1.21
BRF1-215ENST00000549655 RAI14Q9P0K7 980 aa22.6■■□□□ 1.21
BRF1-215ENST00000549655 ZMYM6O95789 1325 aa22.6■■□□□ 1.21
BRF1-215ENST00000549655 TCHHQ07283 1943 aa22.6■■□□□ 1.21
BRF1-215ENST00000549655 SEMA3EO15041 775 aa22.59■■□□□ 1.21
BRF1-215ENST00000549655 JAK2O60674 1132 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms