RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 HHIPQ96QV1 700 aa13.12□□□□□ -0.31
PRIM1-204ENST00000549549 SRRTQ9BXP5 876 aaKnown RBP13.12□□□□□ -0.31
PRIM1-204ENST00000549549 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
PRIM1-204ENST00000549549 H7C1W4 665 aa13.11□□□□□ -0.31
PRIM1-204ENST00000549549 FAAP100Q0VG06 881 aa13.11□□□□□ -0.31
PRIM1-204ENST00000549549 RIPOR1Q6ZS17 1223 aa13.11□□□□□ -0.31
PRIM1-204ENST00000549549 TRIM55Q9BYV6 548 aa13.11□□□□□ -0.31
PRIM1-204ENST00000549549 ENPP3O14638 875 aa13.1□□□□□ -0.31
PRIM1-204ENST00000549549 PAGE1O75459 146 aa13.1□□□□□ -0.31
PRIM1-204ENST00000549549 TRPM4Q8TD43 1214 aa13.1□□□□□ -0.31
PRIM1-204ENST00000549549 BHMTQ93088 406 aa13.1□□□□□ -0.31
PRIM1-204ENST00000549549 SLC35F4A4IF30 521 aa13.09□□□□□ -0.31
PRIM1-204ENST00000549549 FAM187AA6NFU0 413 aa13.09□□□□□ -0.31
PRIM1-204ENST00000549549 PDE2AO00408 941 aaPredicted RBP13.09□□□□□ -0.31
PRIM1-204ENST00000549549 DBN1Q16643 649 aa13.09□□□□□ -0.31
PRIM1-204ENST00000549549 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
PRIM1-204ENST00000549549 NSUN5Q96P11 429 aaKnown RBP13.09□□□□□ -0.31
PRIM1-204ENST00000549549 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
PRIM1-204ENST00000549549 LOC102724428A0A0B4J2F2 783 aa13.08□□□□□ -0.32
PRIM1-204ENST00000549549 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
PRIM1-204ENST00000549549 SIK1P57059 783 aa13.08□□□□□ -0.32
PRIM1-204ENST00000549549 GPLD1P80108 840 aa13.08□□□□□ -0.32
PRIM1-204ENST00000549549 FAM182BQ5T319 152 aa13.08□□□□□ -0.32
PRIM1-204ENST00000549549 ANAPC16Q96DE5 110 aa13.08□□□□□ -0.32
PRIM1-204ENST00000549549 RNPC3Q96LT9 517 aaKnown RBP13.08□□□□□ -0.32
PRIM1-204ENST00000549549 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
PRIM1-204ENST00000549549 SNTG2Q9NY99 539 aa13.08□□□□□ -0.32
PRIM1-204ENST00000549549 ZBTB42B2RXF5 422 aa13.07□□□□□ -0.32
PRIM1-204ENST00000549549 CLSTN1O94985 981 aa13.07□□□□□ -0.32
PRIM1-204ENST00000549549 RASA3Q14644 834 aa13.07□□□□□ -0.32
PRIM1-204ENST00000549549 TNNI3KQ59H18 835 aa13.07□□□□□ -0.32
PRIM1-204ENST00000549549 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
PRIM1-204ENST00000549549 TMEM39AQ9NV64 488 aa13.07□□□□□ -0.32
PRIM1-204ENST00000549549 FAM221AA4D161 298 aa13.06□□□□□ -0.32
PRIM1-204ENST00000549549 MAN1A2O60476 641 aa13.06□□□□□ -0.32
PRIM1-204ENST00000549549 F13A1P00488 732 aa13.06□□□□□ -0.32
PRIM1-204ENST00000549549 SEZ6Q53EL9 994 aa13.06□□□□□ -0.32
PRIM1-204ENST00000549549 BNC2Q6ZN30 1099 aaPredicted RBP13.06□□□□□ -0.32
PRIM1-204ENST00000549549 CRIPAKQ8N1N5 446 aa13.06□□□□□ -0.32
PRIM1-204ENST00000549549 GATAD2BQ8WXI9 593 aa13.06□□□□□ -0.32
PRIM1-204ENST00000549549 GMCL1Q96IK5 515 aa13.06□□□□□ -0.32
PRIM1-204ENST00000549549 DEPDC7Q96QD5 511 aa13.06□□□□□ -0.32
PRIM1-204ENST00000549549 BMP6P22004 513 aa13.05□□□□□ -0.32
PRIM1-204ENST00000549549 PTSQ03393 145 aa13.05□□□□□ -0.32
PRIM1-204ENST00000549549 RASSF4Q9H2L5 321 aa13.05□□□□□ -0.32
PRIM1-204ENST00000549549 MSRB2Q9Y3D2 182 aa13.05□□□□□ -0.32
PRIM1-204ENST00000549549 SMAD7O15105 426 aaKnown RBP13.04□□□□□ -0.32
PRIM1-204ENST00000549549 CD33P20138 364 aa13.04□□□□□ -0.32
PRIM1-204ENST00000549549 GIPRP48546 466 aa13.04□□□□□ -0.32
PRIM1-204ENST00000549549 RAB44Q7Z6P3 723 aaPredicted RBP13.04□□□□□ -0.32
PRIM1-204ENST00000549549 FBXO27Q8NI29 283 aa13.04□□□□□ -0.32
PRIM1-204ENST00000549549 ASAP3Q8TDY4 903 aa13.04□□□□□ -0.32
PRIM1-204ENST00000549549 ABHD17AQ96GS6 310 aa13.04□□□□□ -0.32
PRIM1-204ENST00000549549 CCDC113Q9H0I3 377 aa13.04□□□□□ -0.32
PRIM1-204ENST00000549549 GPN3Q9UHW5 284 aaPredicted RBP13.04□□□□□ -0.32
PRIM1-204ENST00000549549 ATXN7L1Q9ULK2 861 aaPredicted RBP13.04□□□□□ -0.32
PRIM1-204ENST00000549549 PPT2Q9UMR5 302 aa13.04□□□□□ -0.32
PRIM1-204ENST00000549549 R3HCC1Q9Y3T6 440 aaKnown RBP13.04□□□□□ -0.32
PRIM1-204ENST00000549549 FAM221BA6H8Z2 402 aa13.03□□□□□ -0.32
PRIM1-204ENST00000549549 MPP2Q14168 576 aa13.03□□□□□ -0.32
PRIM1-204ENST00000549549 GPATCH3Q96I76 525 aa13.03□□□□□ -0.32
PRIM1-204ENST00000549549 POP1Q99575 1024 aaKnown RBP13.03□□□□□ -0.32
PRIM1-204ENST00000549549 MUC3BQ9H195 1237 aa13.03□□□□□ -0.32
PRIM1-204ENST00000549549 CYP8B1Q9UNU6 501 aa13.03□□□□□ -0.32
PRIM1-204ENST00000549549 PCDHB5Q9Y5E4 795 aa13.03□□□□□ -0.32
PRIM1-204ENST00000549549 J3QW42 95 aa13.02□□□□□ -0.33
PRIM1-204ENST00000549549 DGAT1O75907 488 aa13.02□□□□□ -0.33
PRIM1-204ENST00000549549 EIF6P56537 245 aaKnown RBP13.02□□□□□ -0.33
PRIM1-204ENST00000549549 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.33
PRIM1-204ENST00000549549 NEUROD1Q13562 356 aa13.02□□□□□ -0.33
PRIM1-204ENST00000549549 RASIP1Q5U651 963 aa13.02□□□□□ -0.33
PRIM1-204ENST00000549549 CCDC81Q6ZN84 652 aa13.02□□□□□ -0.33
PRIM1-204ENST00000549549 REXO1Q8N1G1 1221 aaKnown RBP13.02□□□□□ -0.33
PRIM1-204ENST00000549549 FAM169BQ8N8A8 192 aa13.02□□□□□ -0.33
PRIM1-204ENST00000549549 MIR1-1HGQ9H1L0 117 aa13.02□□□□□ -0.33
PRIM1-204ENST00000549549 CLEC4MQ9H2X3 399 aaPredicted RBP13.02□□□□□ -0.33
PRIM1-204ENST00000549549 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
PRIM1-204ENST00000549549 CILPO75339 1184 aa13.01□□□□□ -0.33
PRIM1-204ENST00000549549 ATP11AP98196 1134 aa13.01□□□□□ -0.33
PRIM1-204ENST00000549549 PCSK7Q16549 785 aa13.01□□□□□ -0.33
PRIM1-204ENST00000549549 PLEKHG4Q58EX7 1191 aa13.01□□□□□ -0.33
PRIM1-204ENST00000549549 BSNDQ8WZ55 320 aa13.01□□□□□ -0.33
PRIM1-204ENST00000549549 BRINP2Q9C0B6 783 aa13.01□□□□□ -0.33
PRIM1-204ENST00000549549 AXIN1O15169 862 aa13□□□□□ -0.33
PRIM1-204ENST00000549549 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
PRIM1-204ENST00000549549 NME2P22392 152 aa13□□□□□ -0.33
PRIM1-204ENST00000549549 ZNF165P49910 485 aa13□□□□□ -0.33
PRIM1-204ENST00000549549 PTPROQ16827 1216 aa13□□□□□ -0.33
PRIM1-204ENST00000549549 CWF19L2Q2TBE0 894 aaKnown RBP13□□□□□ -0.33
PRIM1-204ENST00000549549 OR6P1Q8NGX9 317 aa13□□□□□ -0.33
PRIM1-204ENST00000549549 KCNB2Q92953 911 aa13□□□□□ -0.33
PRIM1-204ENST00000549549 B3GALT4O96024 378 aa12.99□□□□□ -0.33
PRIM1-204ENST00000549549 CCDC155Q8N6L0 562 aa12.99□□□□□ -0.33
PRIM1-204ENST00000549549 PLD4Q96BZ4 506 aa12.99□□□□□ -0.33
PRIM1-204ENST00000549549 LMNB1P20700 586 aa12.98□□□□□ -0.33
PRIM1-204ENST00000549549 CELF2-AS1Q8N7Q2 184 aa12.98□□□□□ -0.33
PRIM1-204ENST00000549549 RBBP8NLQ8NC74 664 aaPredicted RBP12.98□□□□□ -0.33
PRIM1-204ENST00000549549 JARID2Q92833 1246 aaPredicted RBP12.98□□□□□ -0.33
PRIM1-204ENST00000549549 RGS20O76081 388 aa12.97□□□□□ -0.33
PRIM1-204ENST00000549549 GHRHP01286 108 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms