RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 RUNDC1Q96C34 613 aa13.94□□□□□ -0.18
TRAFD1-206ENST00000549358 ZNF333Q96JL9 665 aa13.94□□□□□ -0.18
TRAFD1-206ENST00000549358 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
TRAFD1-206ENST00000549358 CLRN2A0PK11 232 aa13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 UNCXA6NJT0 531 aa13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 H0YGN5 161 aa13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 USP2O75604 605 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 DDX58O95786 925 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 GJA5P36382 358 aa13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 IREB2P48200 963 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 NBPF12Q5TAG4 269 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 MAP3K2Q9Y2U5 619 aa13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 PPP2R3BQ9Y5P8 575 aa13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 COL1A1P02452 1464 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-206ENST00000549358 SSC5DA1L4H1 1573 aa13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 RBBP6Q7Z6E9 1792 aaKnown RBP13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 TESPA1A2RU30 521 aaPredicted RBP13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 F8W031 263 aaPredicted RBP13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 MYO1BO43795 1136 aa13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 ANKRD13AQ8IZ07 590 aa13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 ANKRD2Q9GZV1 360 aa13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 VEZTQ9HBM0 779 aa13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 CD209Q9NNX6 404 aa13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 PTCH2Q9Y6C5 1203 aa13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 ZNF646O15015 1829 aaPredicted RBP13.92□□□□□ -0.18
TRAFD1-206ENST00000549358 IGKV5-2P06315 115 aa13.91□□□□□ -0.18
TRAFD1-206ENST00000549358 KCNJ4P48050 445 aa13.91□□□□□ -0.18
TRAFD1-206ENST00000549358 ARHGEF6Q15052 776 aa13.91□□□□□ -0.18
TRAFD1-206ENST00000549358 CERS5Q8N5B7 392 aa13.91□□□□□ -0.18
TRAFD1-206ENST00000549358 MTMR14Q8NCE2 650 aa13.91□□□□□ -0.18
TRAFD1-206ENST00000549358 PRMT6Q96LA8 375 aaPredicted RBP13.91□□□□□ -0.18
TRAFD1-206ENST00000549358 ELP3Q9H9T3 547 aa13.91□□□□□ -0.18
TRAFD1-206ENST00000549358 RASA3Q14644 834 aa13.9□□□□□ -0.18
TRAFD1-206ENST00000549358 CFAP100Q494V2 611 aa13.9□□□□□ -0.18
TRAFD1-206ENST00000549358 OPTNQ96CV9 577 aa13.9□□□□□ -0.18
TRAFD1-206ENST00000549358 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
TRAFD1-206ENST00000549358 SZT2Q5T011 3432 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 PI4KAP2A4QPH2 592 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 ZNF853P0CG23 659 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 RBM5P52756 815 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 RALBP1Q15311 655 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 CWF19L2Q2TBE0 894 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 KSR2Q6VAB6 950 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 PI4KAP1Q8N8J0 262 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 C8orf58Q8NAV2 365 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 SH3TC2Q8TF17 1288 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 ZFYVE28Q9HCC9 887 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 AOX1Q06278 1338 aa13.89□□□□□ -0.19
TRAFD1-206ENST00000549358 SNAP23O00161 211 aa13.88□□□□□ -0.19
TRAFD1-206ENST00000549358 ITGA6P23229 1130 aa13.88□□□□□ -0.19
TRAFD1-206ENST00000549358 CHRNDQ07001 517 aa13.88□□□□□ -0.19
TRAFD1-206ENST00000549358 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
TRAFD1-206ENST00000549358 WDR43Q15061 677 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRAFD1-206ENST00000549358 TAF1CQ15572 869 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-206ENST00000549358 CCDC30Q5VVM6 783 aa13.88□□□□□ -0.19
TRAFD1-206ENST00000549358 ADAMTS8Q9UP79 889 aa13.88□□□□□ -0.19
TRAFD1-206ENST00000549358 H7C1W4 665 aa13.87□□□□□ -0.19
TRAFD1-206ENST00000549358 DLL1O00548 723 aa13.87□□□□□ -0.19
TRAFD1-206ENST00000549358 TAF5LO75529 589 aa13.87□□□□□ -0.19
TRAFD1-206ENST00000549358 UBE3BQ7Z3V4 1068 aa13.87□□□□□ -0.19
TRAFD1-206ENST00000549358 BRI3BPQ8WY22 251 aa13.87□□□□□ -0.19
TRAFD1-206ENST00000549358 DPF3Q92784 378 aa13.87□□□□□ -0.19
TRAFD1-206ENST00000549358 RBM27Q9P2N5 1060 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-206ENST00000549358 JAG2Q9Y219 1238 aa13.87□□□□□ -0.19
TRAFD1-206ENST00000549358 SPEF2Q9C093 1822 aa13.87□□□□□ -0.19
TRAFD1-206ENST00000549358 CCL15-CCL14A0A0B4J2E2 113 aa13.86□□□□□ -0.19
TRAFD1-206ENST00000549358 NEURL1BA8MQ27 555 aa13.86□□□□□ -0.19
TRAFD1-206ENST00000549358 GNAI1P63096 354 aa13.86□□□□□ -0.19
TRAFD1-206ENST00000549358 CCL15Q16663 113 aa13.86□□□□□ -0.19
TRAFD1-206ENST00000549358 FAM43AQ8N2R8 423 aa13.86□□□□□ -0.19
TRAFD1-206ENST00000549358 HELBQ8NG08 1087 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-206ENST00000549358 ARHGAP39Q9C0H5 1083 aa13.86□□□□□ -0.19
TRAFD1-206ENST00000549358 IFT57Q9NWB7 429 aa13.86□□□□□ -0.19
TRAFD1-206ENST00000549358 GTF2A2P52657 109 aa13.85□□□□□ -0.19
TRAFD1-206ENST00000549358 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-206ENST00000549358 SLC17A8Q8NDX2 589 aa13.85□□□□□ -0.19
TRAFD1-206ENST00000549358 CHMP4AQ9BY43 222 aa13.85□□□□□ -0.19
TRAFD1-206ENST00000549358 LAMB1P07942 1786 aa13.85□□□□□ -0.19
TRAFD1-206ENST00000549358 IRS2Q9Y4H2 1338 aa13.85□□□□□ -0.19
TRAFD1-206ENST00000549358 ECM2O94769 699 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-206ENST00000549358 CSF1RP07333 972 aa13.84□□□□□ -0.19
TRAFD1-206ENST00000549358 IL1R1P14778 569 aa13.84□□□□□ -0.19
TRAFD1-206ENST00000549358 VGLL4Q14135 290 aa13.84□□□□□ -0.19
TRAFD1-206ENST00000549358 KIF22Q14807 665 aa13.84□□□□□ -0.19
TRAFD1-206ENST00000549358 ZNF804AQ7Z570 1209 aa13.84□□□□□ -0.19
TRAFD1-206ENST00000549358 CDAN1Q8IWY9 1227 aa13.84□□□□□ -0.19
TRAFD1-206ENST00000549358 TDRD3Q9H7E2 651 aaKnown RBP13.84□□□□□ -0.19
TRAFD1-206ENST00000549358 WDHD1O75717 1129 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-206ENST00000549358 FKBP1AP62942 108 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-206ENST00000549358 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
TRAFD1-206ENST00000549358 CALD1Q05682 793 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-206ENST00000549358 TNFAIP1Q13829 316 aa13.83□□□□□ -0.2
TRAFD1-206ENST00000549358 GCKRQ14397 625 aa13.83□□□□□ -0.2
TRAFD1-206ENST00000549358 C15orf52Q6ZUT6 534 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms