RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 S1PR4O95977 384 aa10.18□□□□□ -0.78
RFX4-208ENST00000549040 GNAI3P08754 354 aa10.18□□□□□ -0.78
RFX4-208ENST00000549040 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
RFX4-208ENST00000549040 PPP1R42Q7Z4L9 355 aa10.18□□□□□ -0.78
RFX4-208ENST00000549040 ANKRD44Q8N8A2 993 aa10.18□□□□□ -0.78
RFX4-208ENST00000549040 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
RFX4-208ENST00000549040 SLC24A3Q9HC58 644 aa10.18□□□□□ -0.78
RFX4-208ENST00000549040 C9orf78Q9NZ63 289 aaPredicted RBP10.18□□□□□ -0.78
RFX4-208ENST00000549040 LRRFIP2Q9Y608 721 aaKnown RBP10.18□□□□□ -0.78
RFX4-208ENST00000549040 NUP98P52948 1817 aa10.18□□□□□ -0.78
RFX4-208ENST00000549040 BCORQ6W2J9 1755 aa10.18□□□□□ -0.78
RFX4-208ENST00000549040 CDHR2Q9BYE9 1310 aa10.17□□□□□ -0.78
RFX4-208ENST00000549040 CSF1RP07333 972 aa10.17□□□□□ -0.78
RFX4-208ENST00000549040 HCLS1P14317 486 aaPredicted RBP10.17□□□□□ -0.78
RFX4-208ENST00000549040 PRR5LQ6MZQ0 368 aa10.17□□□□□ -0.78
RFX4-208ENST00000549040 TPTE2Q6XPS3 522 aa10.17□□□□□ -0.78
RFX4-208ENST00000549040 NBPF5PQ86XG9 351 aaPredicted RBP10.17□□□□□ -0.78
RFX4-208ENST00000549040 PLA2G12BQ9BX93 195 aa10.17□□□□□ -0.78
RFX4-208ENST00000549040 C1orf115Q9H7X2 142 aa10.17□□□□□ -0.78
RFX4-208ENST00000549040 V9GY48 417 aaPredicted RBP10.17□□□□□ -0.78
RFX4-208ENST00000549040 SCN7AQ01118 1682 aa10.17□□□□□ -0.78
RFX4-208ENST00000549040 QSER1Q2KHR3 1735 aa10.16□□□□□ -0.78
RFX4-208ENST00000549040 SH3TC1Q8TE82 1336 aa10.16□□□□□ -0.78
RFX4-208ENST00000549040 KLRG2A4D1S0 409 aaPredicted RBP10.16□□□□□ -0.78
RFX4-208ENST00000549040 IRS4O14654 1257 aaPredicted RBP10.16□□□□□ -0.78
RFX4-208ENST00000549040 GNAI2P04899 355 aa10.16□□□□□ -0.78
RFX4-208ENST00000549040 UBTFL1P0CB47 393 aaPredicted RBP10.16□□□□□ -0.78
RFX4-208ENST00000549040 ATP8B2P98198 1209 aa10.16□□□□□ -0.78
RFX4-208ENST00000549040 RABL6Q3YEC7 729 aaPredicted RBP10.16□□□□□ -0.78
RFX4-208ENST00000549040 MTFR1LQ9H019 292 aa10.16□□□□□ -0.78
RFX4-208ENST00000549040 CARMIL3Q8ND23 1372 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 ABCC12Q96J65 1359 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 PNMA6EA0A0J9YXQ4 647 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 PPEF1O14829 653 aaPredicted RBP10.15□□□□□ -0.78
RFX4-208ENST00000549040 IGHDP01880 384 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 MTX1Q13505 466 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 Q3C1V9 767 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 PARP9Q8IXQ6 854 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 TTLL11Q8NHH1 800 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 NYXQ9GZU5 481 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 BICC1Q9H694 974 aaKnown RBP10.15□□□□□ -0.78
RFX4-208ENST00000549040 CASZ1Q86V15 1759 aa10.15□□□□□ -0.78
RFX4-208ENST00000549040 HOXA2O43364 376 aa10.14□□□□□ -0.79
RFX4-208ENST00000549040 PDE8AO60658 829 aa10.14□□□□□ -0.79
RFX4-208ENST00000549040 RFX5P48382 616 aaPredicted RBP10.14□□□□□ -0.79
RFX4-208ENST00000549040 AAMPQ13685 434 aa10.14□□□□□ -0.79
RFX4-208ENST00000549040 SF3B3Q15393 1217 aaKnown RBP10.14□□□□□ -0.79
RFX4-208ENST00000549040 ERICH6BQ5W0A0 696 aa10.14□□□□□ -0.79
RFX4-208ENST00000549040 CEP85Q6P2H3 762 aa10.14□□□□□ -0.79
RFX4-208ENST00000549040 LMBR1LQ6UX01 489 aa10.14□□□□□ -0.79
RFX4-208ENST00000549040 FAM160A2Q8N612 972 aaPredicted RBP10.14□□□□□ -0.79
RFX4-208ENST00000549040 IRX2Q9BZI1 471 aaPredicted RBP10.14□□□□□ -0.79
RFX4-208ENST00000549040 PARP3Q9Y6F1 533 aa10.14□□□□□ -0.79
RFX4-208ENST00000549040 NEFLP07196 543 aa10.13□□□□□ -0.79
RFX4-208ENST00000549040 CTSWP56202 376 aa10.13□□□□□ -0.79
RFX4-208ENST00000549040 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
RFX4-208ENST00000549040 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
RFX4-208ENST00000549040 CNBD1Q8NA66 436 aa10.13□□□□□ -0.79
RFX4-208ENST00000549040 BRIP1Q9BX63 1249 aa10.13□□□□□ -0.79
RFX4-208ENST00000549040 CHMP4BQ9H444 224 aaKnown RBP10.13□□□□□ -0.79
RFX4-208ENST00000549040 LRP5O75197 1615 aa10.13□□□□□ -0.79
RFX4-208ENST00000549040 N4BP2Q86UW6 1770 aaPredicted RBP10.13□□□□□ -0.79
RFX4-208ENST00000549040 COL24A1Q17RW2 1714 aa10.13□□□□□ -0.79
RFX4-208ENST00000549040 ANKRD36CQ5JPF3 1778 aa10.12□□□□□ -0.79
RFX4-208ENST00000549040 GTF2E1P29083 439 aaPredicted RBP10.12□□□□□ -0.79
RFX4-208ENST00000549040 PDE4DQ08499 809 aa10.12□□□□□ -0.79
RFX4-208ENST00000549040 CRY2Q49AN0 593 aa10.12□□□□□ -0.79
RFX4-208ENST00000549040 SSH3Q8TE77 659 aa10.12□□□□□ -0.79
RFX4-208ENST00000549040 HLA-CQ95604 372 aa10.12□□□□□ -0.79
RFX4-208ENST00000549040 GREM2Q9H772 168 aa10.12□□□□□ -0.79
RFX4-208ENST00000549040 SEC31BQ9NQW1 1179 aa10.12□□□□□ -0.79
RFX4-208ENST00000549040 GTF3C3Q9Y5Q9 886 aa10.12□□□□□ -0.79
RFX4-208ENST00000549040 NRXN2Q9P2S2 1712 aa10.11□□□□□ -0.79
RFX4-208ENST00000549040 HOXA10P31260 410 aaPredicted RBP10.11□□□□□ -0.79
RFX4-208ENST00000549040 HDAC1Q13547 482 aaPredicted RBP10.11□□□□□ -0.79
RFX4-208ENST00000549040 KLHDC4Q8TBB5 520 aa10.11□□□□□ -0.79
RFX4-208ENST00000549040 SPIRE2Q8WWL2 714 aa10.11□□□□□ -0.79
RFX4-208ENST00000549040 NLRP3Q96P20 1036 aa10.11□□□□□ -0.79
RFX4-208ENST00000549040 CCDC85AQ96PX6 553 aaPredicted RBP10.11□□□□□ -0.79
RFX4-208ENST00000549040 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
RFX4-208ENST00000549040 HDAC5Q9UQL6 1122 aa10.11□□□□□ -0.79
RFX4-208ENST00000549040 RIC1Q4ADV7 1423 aa10.1□□□□□ -0.79
RFX4-208ENST00000549040 SRGAP3O43295 1099 aa10.1□□□□□ -0.79
RFX4-208ENST00000549040 KCNA3P22001 575 aa10.1□□□□□ -0.79
RFX4-208ENST00000549040 SLC19A1P41440 591 aa10.1□□□□□ -0.79
RFX4-208ENST00000549040 ST5P78524 1137 aa10.1□□□□□ -0.79
RFX4-208ENST00000549040 PTPN12Q05209 780 aaKnown RBP10.1□□□□□ -0.79
RFX4-208ENST00000549040 ZNF594Q96JF6 807 aaPredicted RBP10.1□□□□□ -0.79
RFX4-208ENST00000549040 SPON1Q9HCB6 807 aa10.1□□□□□ -0.79
RFX4-208ENST00000549040 PPP4R2Q9NY27 417 aa10.1□□□□□ -0.79
RFX4-208ENST00000549040 PA2G4Q9UQ80 394 aaKnown RBP10.1□□□□□ -0.79
RFX4-208ENST00000549040 SRGNP10124 158 aa10.09□□□□□ -0.79
RFX4-208ENST00000549040 ITGA6P23229 1130 aa10.09□□□□□ -0.79
RFX4-208ENST00000549040 MSS51Q4VC12 460 aa10.09□□□□□ -0.79
RFX4-208ENST00000549040 SLC51AQ86UW1 340 aa10.09□□□□□ -0.79
RFX4-208ENST00000549040 CELF1Q92879 486 aaKnown RBP10.09□□□□□ -0.79
RFX4-208ENST00000549040 DCTPP1Q9H773 170 aa10.09□□□□□ -0.79
RFX4-208ENST00000549040 COPRSQ9NQ92 184 aa10.09□□□□□ -0.79
RFX4-208ENST00000549040 NOP58Q9Y2X3 529 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms