RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 HELBQ8NG08 1087 aaPredicted RBP6.23□□□□□ -1.41
APP-217ENST00000548570 RPGRQ92834 1020 aaKnown RBP6.23□□□□□ -1.41
APP-217ENST00000548570 ZNF622Q969S3 477 aaKnown RBP eCLIP6.23□□□□□ -1.41
APP-217ENST00000548570 GPR101Q96P66 508 aaPredicted RBP6.23□□□□□ -1.41
APP-217ENST00000548570 SIL1Q9H173 461 aa6.23□□□□□ -1.41
APP-217ENST00000548570 POLLQ9UGP5 575 aa6.23□□□□□ -1.41
APP-217ENST00000548570 AFDNP55196 1824 aaKnown RBP6.22□□□□□ -1.41
APP-217ENST00000548570 NFKBIEO00221 500 aa6.22□□□□□ -1.41
APP-217ENST00000548570 SMARCA5O60264 1052 aaPredicted RBP6.22□□□□□ -1.41
APP-217ENST00000548570 SURF6O75683 361 aaKnown RBP6.22□□□□□ -1.41
APP-217ENST00000548570 HSP90B1P14625 803 aaKnown RBP6.22□□□□□ -1.41
APP-217ENST00000548570 FGFR2P21802 821 aa6.22□□□□□ -1.41
APP-217ENST00000548570 ALDH1B1P30837 517 aa6.22□□□□□ -1.41
APP-217ENST00000548570 FOSBP53539 338 aa6.22□□□□□ -1.41
APP-217ENST00000548570 TFCP2Q12800 502 aa6.22□□□□□ -1.41
APP-217ENST00000548570 DALRD3Q5D0E6 543 aaKnown RBP6.22□□□□□ -1.41
APP-217ENST00000548570 ERICH6BQ5W0A0 696 aa6.22□□□□□ -1.41
APP-217ENST00000548570 LDHAL6AQ6ZMR3 332 aa6.22□□□□□ -1.41
APP-217ENST00000548570 ANKRD18AQ8IVF6 992 aa6.22□□□□□ -1.41
APP-217ENST00000548570 SP8Q8IXZ3 490 aa6.22□□□□□ -1.41
APP-217ENST00000548570 C16orf71Q8IYS4 520 aaPredicted RBP6.22□□□□□ -1.41
APP-217ENST00000548570 HS6ST3Q8IZP7 471 aa6.22□□□□□ -1.41
APP-217ENST00000548570 ANKK1Q8NFD2 765 aa6.22□□□□□ -1.41
APP-217ENST00000548570 OTUD7AQ8TE49 926 aaPredicted RBP6.22□□□□□ -1.41
APP-217ENST00000548570 CNKSR1Q969H4 720 aa6.22□□□□□ -1.41
APP-217ENST00000548570 EAF2Q96CJ1 260 aaPredicted RBP6.22□□□□□ -1.41
APP-217ENST00000548570 CDC5LQ99459 802 aaKnown RBP6.22□□□□□ -1.41
APP-217ENST00000548570 RTFDC1Q9BY42 306 aaPredicted RBP6.22□□□□□ -1.41
APP-217ENST00000548570 CHMP4BQ9H444 224 aaKnown RBP6.22□□□□□ -1.41
APP-217ENST00000548570 TLR7Q9NYK1 1049 aaKnown RBP6.22□□□□□ -1.41
APP-217ENST00000548570 PODXL2Q9NZ53 605 aa6.22□□□□□ -1.41
APP-217ENST00000548570 PIM2Q9P1W9 311 aa6.22□□□□□ -1.41
APP-217ENST00000548570 PDZRN3Q9UPQ7 1066 aa6.22□□□□□ -1.41
APP-217ENST00000548570 DUOX1Q9NRD9 1551 aa6.22□□□□□ -1.41
APP-217ENST00000548570 SALL3Q9BXA9 1300 aa6.22□□□□□ -1.41
APP-217ENST00000548570 PDE8BO95263 885 aa6.21□□□□□ -1.42
APP-217ENST00000548570 PDE4AP27815 886 aa6.21□□□□□ -1.42
APP-217ENST00000548570 ADORA1P30542 326 aa6.21□□□□□ -1.42
APP-217ENST00000548570 IGHMBP2P38935 993 aaKnown RBP6.21□□□□□ -1.42
APP-217ENST00000548570 IL15P40933 162 aaPredicted RBP6.21□□□□□ -1.42
APP-217ENST00000548570 NYAP1Q6ZVC0 841 aa6.21□□□□□ -1.42
APP-217ENST00000548570 TBC1D16Q8TBP0 767 aa6.21□□□□□ -1.42
APP-217ENST00000548570 RHPN1Q8TCX5 695 aa6.21□□□□□ -1.42
APP-217ENST00000548570 ZDHHC16Q969W1 377 aa6.21□□□□□ -1.42
APP-217ENST00000548570 ZBED2Q9BTP6 218 aa6.21□□□□□ -1.42
APP-217ENST00000548570 HDAC5Q9UQL6 1122 aa6.21□□□□□ -1.42
APP-217ENST00000548570 KIF13BQ9NQT8 1826 aa6.2□□□□□ -1.42
APP-217ENST00000548570 COL4A5P29400 1685 aa6.2□□□□□ -1.42
APP-217ENST00000548570 UTRNP46939 3433 aa6.2□□□□□ -1.42
APP-217ENST00000548570 TIMM10P62072 90 aa6.2□□□□□ -1.42
APP-217ENST00000548570 NUCB1Q02818 461 aa6.2□□□□□ -1.42
APP-217ENST00000548570 RASSF7Q02833 373 aa6.2□□□□□ -1.42
APP-217ENST00000548570 PPP1R15BQ5SWA1 713 aa6.2□□□□□ -1.42
APP-217ENST00000548570 MPHOSPH8Q99549 860 aa6.2□□□□□ -1.42
APP-217ENST00000548570 RWDD1Q9H446 243 aaPredicted RBP6.2□□□□□ -1.42
APP-217ENST00000548570 IL1RAPL2Q9NP60 686 aa6.2□□□□□ -1.42
APP-217ENST00000548570 CNNM1Q9NRU3 951 aa6.2□□□□□ -1.42
APP-217ENST00000548570 PPP4R2Q9NY27 417 aa6.2□□□□□ -1.42
APP-217ENST00000548570 DBNLQ9UJU6 430 aaKnown RBP6.2□□□□□ -1.42
APP-217ENST00000548570 BCS1LQ9Y276 419 aa6.2□□□□□ -1.42
APP-217ENST00000548570 LAMB2P55268 1798 aa6.2□□□□□ -1.42
APP-217ENST00000548570 MROH5Q6ZUA9 1318 aa6.2□□□□□ -1.42
APP-217ENST00000548570 ZNF609O15014 1411 aa6.19□□□□□ -1.42
APP-217ENST00000548570 A0A1B0GUL7 405 aa6.19□□□□□ -1.42
APP-217ENST00000548570 APBB1O00213 710 aa6.19□□□□□ -1.42
APP-217ENST00000548570 RAB11FIP3O75154 756 aa6.19□□□□□ -1.42
APP-217ENST00000548570 HMMRO75330 724 aa6.19□□□□□ -1.42
APP-217ENST00000548570 G3BP1Q13283 466 aaKnown RBP eCLIP6.19□□□□□ -1.42
APP-217ENST00000548570 TNNI3KQ59H18 835 aa6.19□□□□□ -1.42
APP-217ENST00000548570 TAF7LQ5H9L4 462 aa6.19□□□□□ -1.42
APP-217ENST00000548570 METTL24Q5JXM2 366 aa6.19□□□□□ -1.42
APP-217ENST00000548570 Q6ZNB5 142 aa6.19□□□□□ -1.42
APP-217ENST00000548570 C15orf52Q6ZUT6 534 aaKnown RBP6.19□□□□□ -1.42
APP-217ENST00000548570 TMC4Q7Z404 712 aa6.19□□□□□ -1.42
APP-217ENST00000548570 FBXO33Q7Z6M2 555 aa6.19□□□□□ -1.42
APP-217ENST00000548570 FAM84BQ96KN1 310 aaPredicted RBP6.19□□□□□ -1.42
APP-217ENST00000548570 PSMD1Q99460 953 aa6.19□□□□□ -1.42
APP-217ENST00000548570 DBNDD2Q9BQY9 259 aa6.19□□□□□ -1.42
APP-217ENST00000548570 CCDC8Q9H0W5 538 aaPredicted RBP6.19□□□□□ -1.42
APP-217ENST00000548570 GPR108Q9NPR9 543 aa6.19□□□□□ -1.42
APP-217ENST00000548570 KCNQ5Q9NR82 932 aa6.19□□□□□ -1.42
APP-217ENST00000548570 NSFL1CQ9UNZ2 370 aaKnown RBP6.19□□□□□ -1.42
APP-217ENST00000548570 FPGT-TNNI3KV9GXZ4 949 aa6.19□□□□□ -1.42
APP-217ENST00000548570 ZNF804BA4D1E1 1349 aa6.19□□□□□ -1.42
APP-217ENST00000548570 XDHP47989 1333 aa6.19□□□□□ -1.42
APP-217ENST00000548570 LTBP1Q14766 1721 aa6.19□□□□□ -1.42
APP-217ENST00000548570 CACNA1FO60840 1977 aa6.18□□□□□ -1.42
APP-217ENST00000548570 COL1A1P02452 1464 aaPredicted RBP6.18□□□□□ -1.42
APP-217ENST00000548570 YDJCA8MPS7 323 aa6.18□□□□□ -1.42
APP-217ENST00000548570 UFL1O94874 794 aa6.18□□□□□ -1.42
APP-217ENST00000548570 NEFLP07196 543 aa6.18□□□□□ -1.42
APP-217ENST00000548570 ATP2B4P23634 1241 aa6.18□□□□□ -1.42
APP-217ENST00000548570 GYG1P46976 350 aa6.18□□□□□ -1.42
APP-217ENST00000548570 BCAMP50895 628 aa6.18□□□□□ -1.42
APP-217ENST00000548570 FKBP4Q02790 459 aaKnown RBP eCLIP6.18□□□□□ -1.42
APP-217ENST00000548570 UBE4AQ14139 1066 aa6.18□□□□□ -1.42
APP-217ENST00000548570 SCARF1Q14162 830 aa6.18□□□□□ -1.42
APP-217ENST00000548570 PUM3Q15397 648 aaKnown RBP6.18□□□□□ -1.42
APP-217ENST00000548570 ATP2B3Q16720 1220 aa6.18□□□□□ -1.42
APP-217ENST00000548570 CCDC93Q567U6 631 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms