RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 PDE3AQ14432 1141 aa10.81□□□□□ -0.68
SP1-203ENST00000548560 C1orf115Q9H7X2 142 aa10.81□□□□□ -0.68
SP1-203ENST00000548560 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
SP1-203ENST00000548560 ZBTB7BO15156 539 aaPredicted RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 PDE8BO95263 885 aa10.8□□□□□ -0.68
SP1-203ENST00000548560 IFIT1P09914 478 aaKnown RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 RPS12P25398 132 aaKnown RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 KLRK1P26718 216 aa10.8□□□□□ -0.68
SP1-203ENST00000548560 IL15P40933 162 aaPredicted RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 GMPSP49915 693 aaPredicted RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 PUM3Q15397 648 aaKnown RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 E2F4Q16254 413 aa10.8□□□□□ -0.68
SP1-203ENST00000548560 EAPPQ56P03 285 aaPredicted RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 C15orf52Q6ZUT6 534 aaKnown RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 PNMA8AQ86V59 439 aaPredicted RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 VPS37DQ86XT2 251 aa10.8□□□□□ -0.68
SP1-203ENST00000548560 SMC1BQ8NDV3 1235 aa10.8□□□□□ -0.68
SP1-203ENST00000548560 RBM46Q8TBY0 533 aaKnown RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 TAF1DQ9H5J8 278 aaPredicted RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 COPRSQ9NQ92 184 aa10.8□□□□□ -0.68
SP1-203ENST00000548560 PA2G4Q9UQ80 394 aaKnown RBP10.8□□□□□ -0.68
SP1-203ENST00000548560 ADAMTSL1Q8N6G6 1762 aa10.8□□□□□ -0.68
SP1-203ENST00000548560 ECM29Q5VYK3 1845 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 USP17L3A6NCW0 530 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 USP17L4A6NCW7 530 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 WTIPA6NIX2 430 aaPredicted RBP10.79□□□□□ -0.68
SP1-203ENST00000548560 POTECB2RU33 542 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 H7C1D1 291 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 SNAP23O00161 211 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 SLC5A1P13866 664 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 SCNN1DP51172 638 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 APLP1P51693 650 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 CAVIN4Q5BKX8 364 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
SP1-203ENST00000548560 USP17L1Q7RTZ2 530 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 TXNRD3Q86VQ6 643 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 GPRC5DQ9NZD1 345 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 CEP126Q9P2H0 1117 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 MYO3BQ8WXR4 1341 aa10.79□□□□□ -0.68
SP1-203ENST00000548560 TRPM7Q96QT4 1865 aa10.78□□□□□ -0.68
SP1-203ENST00000548560 ZNF609O15014 1411 aa10.78□□□□□ -0.68
SP1-203ENST00000548560 POLR2AP24928 1970 aaKnown RBP10.78□□□□□ -0.68
SP1-203ENST00000548560 PNMA6EA0A0J9YXQ4 647 aa10.78□□□□□ -0.68
SP1-203ENST00000548560 PPP1R37O75864 691 aa10.78□□□□□ -0.68
SP1-203ENST00000548560 VIL1P09327 827 aaKnown RBP10.78□□□□□ -0.68
SP1-203ENST00000548560 RRP1P56182 461 aaKnown RBP10.78□□□□□ -0.68
SP1-203ENST00000548560 FSTL1Q12841 308 aa10.78□□□□□ -0.68
SP1-203ENST00000548560 G3BP1Q13283 466 aaKnown RBP eCLIP10.78□□□□□ -0.68
SP1-203ENST00000548560 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
SP1-203ENST00000548560 RSBN1LQ6PCB5 846 aaPredicted RBP10.78□□□□□ -0.68
SP1-203ENST00000548560 LDHDQ86WU2 507 aa10.78□□□□□ -0.68
SP1-203ENST00000548560 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
SP1-203ENST00000548560 VGLL2Q8N8G2 317 aa10.78□□□□□ -0.68
SP1-203ENST00000548560 CD209Q9NNX6 404 aa10.78□□□□□ -0.68
SP1-203ENST00000548560 ADARB2Q9NS39 739 aaKnown RBP10.78□□□□□ -0.68
SP1-203ENST00000548560 FRAT2O75474 233 aaPredicted RBP10.77□□□□□ -0.69
SP1-203ENST00000548560 HIBADHP31937 336 aaKnown RBP10.77□□□□□ -0.69
SP1-203ENST00000548560 EPS15P42566 896 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 ATP8B2P98198 1209 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 ATP2B3Q16720 1220 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 STRIP1Q5VSL9 837 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 TTLL5Q6EMB2 1281 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 USP50Q70EL3 339 aaPredicted RBP10.77□□□□□ -0.69
SP1-203ENST00000548560 ATG9AQ7Z3C6 839 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 AGBL3Q8NEM8 1001 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 FBXO22Q8NEZ5 403 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 LPIN2Q92539 896 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 DPF2Q92785 391 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 KCNQ5Q9NR82 932 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 CNOT7Q9UIV1 285 aaKnown RBP10.77□□□□□ -0.69
SP1-203ENST00000548560 GTF3C3Q9Y5Q9 886 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 IRS2Q9Y4H2 1338 aa10.77□□□□□ -0.69
SP1-203ENST00000548560 HMMRO75330 724 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 IL1R1P14778 569 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 GYG1P46976 350 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 GTF2IP78347 998 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 HTRA3P83110 453 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 TMEM132AQ24JP5 1023 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 C20orf194Q5TEA3 1177 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 CEP85Q6P2H3 762 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 SSH3Q8TE77 659 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 AKAP2Q9Y2D5 859 aa10.76□□□□□ -0.69
SP1-203ENST00000548560 SURF6O75683 361 aaKnown RBP10.75□□□□□ -0.69
SP1-203ENST00000548560 USP17L8P0C7I0 530 aa10.75□□□□□ -0.69
SP1-203ENST00000548560 FGFR2P21802 821 aa10.75□□□□□ -0.69
SP1-203ENST00000548560 DACT2Q5SW24 774 aa10.75□□□□□ -0.69
SP1-203ENST00000548560 RPAP2Q8IXW5 612 aaPredicted RBP10.75□□□□□ -0.69
SP1-203ENST00000548560 OGFOD1Q8N543 542 aa10.75□□□□□ -0.69
SP1-203ENST00000548560 FAM84BQ96KN1 310 aaPredicted RBP10.75□□□□□ -0.69
SP1-203ENST00000548560 ZBTB40Q9NUA8 1239 aa10.75□□□□□ -0.69
SP1-203ENST00000548560 GNL3LQ9NVN8 582 aaKnown RBP10.75□□□□□ -0.69
SP1-203ENST00000548560 HDAC9Q9UKV0 1011 aa10.75□□□□□ -0.69
SP1-203ENST00000548560 GABBR2O75899 941 aa10.74□□□□□ -0.69
SP1-203ENST00000548560 POTEIP0CG38 1075 aa10.74□□□□□ -0.69
SP1-203ENST00000548560 POTEJP0CG39 1038 aa10.74□□□□□ -0.69
SP1-203ENST00000548560 TFCP2Q12800 502 aa10.74□□□□□ -0.69
SP1-203ENST00000548560 KIF4BQ2VIQ3 1234 aa10.74□□□□□ -0.69
SP1-203ENST00000548560 HSP90AB4PQ58FF6 505 aa10.74□□□□□ -0.69
SP1-203ENST00000548560 ERICH6Q7L0X2 663 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms