RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 MICALL1Q8N3F8 863 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 ASAP3Q8TDY4 903 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 TINF2Q9BSI4 451 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 CEP44Q9C0F1 390 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 PRDM6Q9NQX0 595 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 GGT7Q9UJ14 662 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.62□□□□□ -1.35
PTCH1-216ENST00000548379 RGS9O75916 674 aaPredicted RBP6.61□□□□□ -1.35
PTCH1-216ENST00000548379 B3GALT4O96024 378 aa6.61□□□□□ -1.35
PTCH1-216ENST00000548379 CELA3AP09093 270 aa6.61□□□□□ -1.35
PTCH1-216ENST00000548379 CCDC85BQ15834 202 aaPredicted RBP6.61□□□□□ -1.35
PTCH1-216ENST00000548379 ZNF423Q2M1K9 1284 aa6.61□□□□□ -1.35
PTCH1-216ENST00000548379 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
PTCH1-216ENST00000548379 TPTE2Q6XPS3 522 aa6.61□□□□□ -1.35
PTCH1-216ENST00000548379 USP48Q86UV5 1035 aa6.61□□□□□ -1.35
PTCH1-216ENST00000548379 EDARADDQ8WWZ3 215 aa6.61□□□□□ -1.35
PTCH1-216ENST00000548379 BTBD6Q96KE9 485 aa6.61□□□□□ -1.35
PTCH1-216ENST00000548379 TRIM56Q9BRZ2 755 aaKnown RBP6.61□□□□□ -1.35
PTCH1-216ENST00000548379 COPRSQ9NQ92 184 aa6.61□□□□□ -1.35
PTCH1-216ENST00000548379 KCNQ5Q9NR82 932 aa6.61□□□□□ -1.35
PTCH1-216ENST00000548379 FBXO24O75426 580 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 BCRP11274 1271 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 ESRRAP11474 423 aaPredicted RBP6.6□□□□□ -1.35
PTCH1-216ENST00000548379 RLBP1P12271 317 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 CDC27P30260 824 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 GMPRP36959 345 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 AFF1P51825 1210 aaKnown RBP6.6□□□□□ -1.35
PTCH1-216ENST00000548379 PCDH1Q08174 1060 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 COL9A3Q14050 684 aaPredicted RBP6.6□□□□□ -1.35
PTCH1-216ENST00000548379 NAALADL2Q58DX5 795 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 ZNF654Q8IZM8 581 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 SLC43A3Q8NBI5 491 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 ACBD3Q9H3P7 528 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 SH2B1Q9NRF2 756 aaPredicted RBP6.6□□□□□ -1.35
PTCH1-216ENST00000548379 KBTBD4Q9NVX7 518 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 PCDHGB7Q9Y5F8 929 aa6.6□□□□□ -1.35
PTCH1-216ENST00000548379 SHISA8B8ZZ34 492 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 TM4SF5O14894 197 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 CELA2BP08218 269 aaPredicted RBP6.59□□□□□ -1.35
PTCH1-216ENST00000548379 HOXB4P17483 251 aaPredicted RBP6.59□□□□□ -1.35
PTCH1-216ENST00000548379 EPHA1P21709 976 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 PWP1Q13610 501 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 CHSY3Q70JA7 882 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 GALNT6Q8NCL4 622 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 PHC3Q8NDX5 983 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 NUDT8Q8WV74 236 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 RHOVQ96L33 236 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 TMEM74Q96NL1 305 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 LACRTQ9GZZ8 138 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 TMEM39AQ9NV64 488 aa6.59□□□□□ -1.35
PTCH1-216ENST00000548379 H3BRJ5 948 aa6.58□□□□□ -1.36
PTCH1-216ENST00000548379 PAGE1O75459 146 aa6.58□□□□□ -1.36
PTCH1-216ENST00000548379 GARTP22102 1010 aa6.58□□□□□ -1.36
PTCH1-216ENST00000548379 LIG3P49916 1009 aa6.58□□□□□ -1.36
PTCH1-216ENST00000548379 RPS26P62854 115 aaKnown RBP6.58□□□□□ -1.36
PTCH1-216ENST00000548379 GDF6Q6KF10 455 aaPredicted RBP6.58□□□□□ -1.36
PTCH1-216ENST00000548379 LYPD4Q6UWN0 246 aa6.58□□□□□ -1.36
PTCH1-216ENST00000548379 AGMOQ6ZNB7 445 aa6.58□□□□□ -1.36
PTCH1-216ENST00000548379 SOX17Q9H6I2 414 aaPredicted RBP6.58□□□□□ -1.36
PTCH1-216ENST00000548379 CCSER2Q9H7U1 834 aa6.58□□□□□ -1.36
PTCH1-216ENST00000548379 JPH1Q9HDC5 661 aaPredicted RBP6.58□□□□□ -1.36
PTCH1-216ENST00000548379 ADAMTS1Q9UHI8 967 aa6.58□□□□□ -1.36
PTCH1-216ENST00000548379 M0R082 166 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 SOX1O00570 391 aaPredicted RBP6.57□□□□□ -1.36
PTCH1-216ENST00000548379 LILRB5O75023 590 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 IGSF3O75054 1194 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 WFS1O76024 890 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 BMP6P22004 513 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 GJA8P48165 433 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 TNNI2P48788 182 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 RELL1Q8IUW5 271 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 IL22RA1Q8N6P7 574 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 ZNF417Q8TAU3 575 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 WHAMMQ8TF30 809 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 WNT8BQ93098 351 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 ZNF775Q96BV0 537 aaPredicted RBP6.57□□□□□ -1.36
PTCH1-216ENST00000548379 ZNF587Q96SQ5 575 aaPredicted RBP6.57□□□□□ -1.36
PTCH1-216ENST00000548379 GMLQ99445 158 aa6.57□□□□□ -1.36
PTCH1-216ENST00000548379 GREM1O60565 184 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 NID1P14543 1247 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 NME2P22392 152 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 LMNB2Q03252 620 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 PPP2R3AQ06190 1150 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 IKBKEQ14164 716 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 PCNX4Q63HM2 1172 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 TREML4Q6UXN2 200 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 C8orf86Q6ZUL3 223 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 NRSN2Q9GZP1 204 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 GPN3Q9UHW5 284 aaPredicted RBP6.56□□□□□ -1.36
PTCH1-216ENST00000548379 PPME1Q9Y570 386 aa6.56□□□□□ -1.36
PTCH1-216ENST00000548379 TFE3P19532 575 aaPredicted RBP6.55□□□□□ -1.36
PTCH1-216ENST00000548379 GBP2P32456 591 aaPredicted RBP6.55□□□□□ -1.36
PTCH1-216ENST00000548379 EIF4A3P38919 411 aaKnown RBP6.55□□□□□ -1.36
PTCH1-216ENST00000548379 DGKGP49619 791 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 CABP4P57796 275 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 PIP4K2BP78356 416 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 ZNF252P-AS1Q0IIN9 211 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 RASIP1Q5U651 963 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 HGSNATQ68CP4 663 aa6.55□□□□□ -1.36
PTCH1-216ENST00000548379 MSL1Q68DK7 614 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms