RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 TNS4Q8IZW8 715 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 CCDC120Q96HB5 630 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 CRELD1Q96HD1 420 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 CBLCQ9ULV8 474 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 WASHC2CQ9Y4E1 1318 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 MUC5ACP98088 5654 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 EIF3AQ14152 1382 aaKnown RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 ZNF609O15014 1411 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 CCDC88AQ3V6T2 1871 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 TOMM70O94826 608 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 TMEM253P0C7T8 217 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 PPP1R15BQ5SWA1 713 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 RIC3Q7Z5B4 369 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 COL23A1Q86Y22 540 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 SIAH1Q8IUQ4 282 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 GCC1Q96CN9 775 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 EYA1Q99502 592 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 BCL11BQ9C0K0 894 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 PRO3102Q9H379 93 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 ATG3Q9NT62 314 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 CD2APQ9Y5K6 639 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 OAS3Q9Y6K5 1087 aaKnown RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 RPGRIP1LQ68CZ1 1315 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 KALRNO60229 2985 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 DNAH1Q9P2D7 4330 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 RGPD2P0DJD1 1756 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 LTBP2Q14767 1821 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 ZSCAN22P10073 491 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 IDI1Q13907 227 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 NBR1Q14596 966 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 GPR162Q16538 588 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 CDCA7LQ96GN5 454 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 C8orf37Q96NL8 207 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 WWC3Q9ULE0 1092 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 KANK1Q14678 1352 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 MRC1P22897 1456 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 ECM29Q5VYK3 1845 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 SLX4Q8IY92 1834 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 GPR37L1O60883 481 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 CELA3BP08861 270 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 EN1Q05925 392 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 NBPF8Q3BBV2 869 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 NBPF14Q5TI25 921 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 PLVAPQ9BX97 442 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 FHDC1Q9C0D6 1143 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 EFCC1Q9HA90 598 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 GPHNQ9NQX3 736 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 A0A1B0GUL6 1792 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 ARID3CA6NKF2 412 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 THBS1P07996 1170 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 CHGAP10645 457 aaKnown RBP0.65□□□□□ -2.3
CEP290-203ENST00000547691 HSPA8P11142 646 aaKnown RBP0.65□□□□□ -2.3
CEP290-203ENST00000547691 ATF3P18847 181 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 USP6P35125 1406 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 HNRNPMP52272 730 aaKnown RBP eCLIP0.65□□□□□ -2.3
CEP290-203ENST00000547691 INHBCP55103 352 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 PKD1P98161 4303 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 MLLT1Q03111 559 aaPredicted RBP0.65□□□□□ -2.3
CEP290-203ENST00000547691 EPHA10Q5JZY3 1008 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 LINC00114Q6XXX2 140 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 SCUBE3Q8IX30 993 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 LINC00528Q8N1L1 170 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 ALPK3Q96L96 1907 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 KIF20BQ96Q89 1820 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 MRIQ9BWK5 157 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 SLITRK6Q9H5Y7 841 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 GJA3Q9Y6H8 435 aa0.65□□□□□ -2.3
CEP290-203ENST00000547691 NEBP20929 6669 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 COL4A5P29400 1685 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 DMXL2Q8TDJ6 3036 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 PNPLA7Q6ZV29 1317 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 CHRNA4P43681 627 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 KCNJ4P48050 445 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 SF3B2Q13435 895 aaKnown RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 SLC15A2Q16348 729 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 PTCRAQ6ISU1 281 aaPredicted RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 FBXL18Q96ME1 805 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 CNOT11Q9UKZ1 510 aaKnown RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 AMOTL2Q9Y2J4 779 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 COL11A1P12107 1806 aaPredicted RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 FRMPD3Q5JV73 1810 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 ANKRD36CQ5JPF3 1778 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 CD163L1Q9NR16 1453 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 CPSF1Q10570 1443 aaKnown RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 KDRP35968 1356 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 INSRRP14616 1297 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 NOM1Q5C9Z4 860 aaKnown RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 RNFT1Q5M7Z0 435 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 LRRC56Q8IYG6 542 aaPredicted RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 ABHD8Q96I13 439 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 HHIPL1Q96JK4 782 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 NPDC1Q9NQX5 325 aaPredicted RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 WDFY4Q6ZS81 3184 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 COL4A6Q14031 1691 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 PPIP5K1Q6PFW1 1433 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 CNTNAP4Q9C0A0 1308 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 RASSF10A6NK89 507 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 KIF3BO15066 747 aa0.65□□□□□ -2.31
CEP290-203ENST00000547691 HSPA1AP0DMV8 641 aaKnown RBP0.65□□□□□ -2.31
CEP290-203ENST00000547691 HSPA1BP0DMV9 641 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms