RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 VEGFAP15692 232 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-204ENST00000547687 ATP5JP18859 108 aa19.89■□□□□ 0.77
CHMP1A-204ENST00000547687 MCM2P49736 904 aa19.89■□□□□ 0.77
CHMP1A-204ENST00000547687 METTL24Q5JXM2 366 aa19.89■□□□□ 0.77
CHMP1A-204ENST00000547687 GPR101Q96P66 508 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-204ENST00000547687 LSG1Q9H089 658 aaKnown RBP19.89■□□□□ 0.77
CHMP1A-204ENST00000547687 RPS8P62241 208 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-204ENST00000547687 NSFL1CQ9UNZ2 370 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-204ENST00000547687 RAD50Q92878 1312 aa19.88■□□□□ 0.77
CHMP1A-204ENST00000547687 FZD9O00144 591 aa19.88■□□□□ 0.77
CHMP1A-204ENST00000547687 GPSM2P81274 684 aa19.88■□□□□ 0.77
CHMP1A-204ENST00000547687 AKAP2Q9Y2D5 859 aa19.88■□□□□ 0.77
CHMP1A-204ENST00000547687 LTBP1Q14766 1721 aa19.87■□□□□ 0.77
CHMP1A-204ENST00000547687 CWC22Q9HCG8 908 aaKnown RBP19.87■□□□□ 0.77
CHMP1A-204ENST00000547687 GJA3Q9Y6H8 435 aa19.87■□□□□ 0.77
CHMP1A-204ENST00000547687 RTL9Q8NET4 1388 aa19.87■□□□□ 0.77
CHMP1A-204ENST00000547687 DDX11L8A8MPP1 907 aa19.86■□□□□ 0.77
CHMP1A-204ENST00000547687 POTEIP0CG38 1075 aa19.86■□□□□ 0.77
CHMP1A-204ENST00000547687 POTEJP0CG39 1038 aa19.86■□□□□ 0.77
CHMP1A-204ENST00000547687 GBP4Q96PP9 640 aa19.86■□□□□ 0.77
CHMP1A-204ENST00000547687 GRIPAP1Q4V328 841 aa19.86■□□□□ 0.77
CHMP1A-204ENST00000547687 VGLL2Q8N8G2 317 aa19.86■□□□□ 0.77
CHMP1A-204ENST00000547687 MPHOSPH8Q99549 860 aa19.86■□□□□ 0.77
CHMP1A-204ENST00000547687 NDUFB9Q9Y6M9 179 aa19.86■□□□□ 0.77
CHMP1A-204ENST00000547687 SCN4AP35499 1836 aa19.86■□□□□ 0.77
CHMP1A-204ENST00000547687 HIP1O00291 1037 aa19.85■□□□□ 0.77
CHMP1A-204ENST00000547687 RIMBP2O15034 1052 aa19.85■□□□□ 0.77
CHMP1A-204ENST00000547687 NIM1KQ8IY84 436 aa19.85■□□□□ 0.77
CHMP1A-204ENST00000547687 EDC3Q96F86 508 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-204ENST00000547687 RTFDC1Q9BY42 306 aaPredicted RBP19.85■□□□□ 0.77
CHMP1A-204ENST00000547687 POLLQ9UGP5 575 aa19.85■□□□□ 0.77
CHMP1A-204ENST00000547687 IL27Q8NEV9 243 aa19.85■□□□□ 0.77
CHMP1A-204ENST00000547687 RBM46Q8TBY0 533 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-204ENST00000547687 XAGE2Q96GT9 111 aa19.85■□□□□ 0.77
CHMP1A-204ENST00000547687 C6orf229H3BNL8 230 aa19.84■□□□□ 0.77
CHMP1A-204ENST00000547687 PDE8BO95263 885 aa19.84■□□□□ 0.77
CHMP1A-204ENST00000547687 ADORA1P30542 326 aa19.84■□□□□ 0.77
CHMP1A-204ENST00000547687 IGHMBP2P38935 993 aaKnown RBP19.84■□□□□ 0.77
CHMP1A-204ENST00000547687 ATP2B3Q16720 1220 aa19.84■□□□□ 0.77
CHMP1A-204ENST00000547687 HELBQ8NG08 1087 aaPredicted RBP19.84■□□□□ 0.77
CHMP1A-204ENST00000547687 TMX3Q96JJ7 454 aa19.84■□□□□ 0.77
CHMP1A-204ENST00000547687 MROH5Q6ZUA9 1318 aa19.84■□□□□ 0.77
CHMP1A-204ENST00000547687 WTIPA6NIX2 430 aaPredicted RBP19.83■□□□□ 0.77
CHMP1A-204ENST00000547687 HSPA6P17066 643 aa19.83■□□□□ 0.77
CHMP1A-204ENST00000547687 EIF6P56537 245 aaKnown RBP19.83■□□□□ 0.77
CHMP1A-204ENST00000547687 NUCB2P80303 420 aa19.83■□□□□ 0.77
CHMP1A-204ENST00000547687 TMC4Q7Z404 712 aa19.83■□□□□ 0.77
CHMP1A-204ENST00000547687 DNAJC2Q99543 621 aaKnown RBP19.83■□□□□ 0.77
CHMP1A-204ENST00000547687 HAUS7Q99871 368 aa19.83■□□□□ 0.77
CHMP1A-204ENST00000547687 TRAK2O60296 914 aa19.83■□□□□ 0.76
CHMP1A-204ENST00000547687 ANKRD18AQ8IVF6 992 aa19.83■□□□□ 0.76
CHMP1A-204ENST00000547687 SUPT20HQ8NEM7 779 aa19.83■□□□□ 0.76
CHMP1A-204ENST00000547687 SNX14Q9Y5W7 946 aa19.83■□□□□ 0.76
CHMP1A-204ENST00000547687 HTRA3P83110 453 aa19.82■□□□□ 0.76
CHMP1A-204ENST00000547687 KIAA2012Q0VF49 1180 aa19.82■□□□□ 0.76
CHMP1A-204ENST00000547687 ZGPATQ8N5A5 531 aaKnown RBP19.82■□□□□ 0.76
CHMP1A-204ENST00000547687 CDC5LQ99459 802 aaKnown RBP19.82■□□□□ 0.76
CHMP1A-204ENST00000547687 FSD1Q9BTV5 496 aa19.82■□□□□ 0.76
CHMP1A-204ENST00000547687 UPF3BQ9BZI7 483 aaKnown RBP19.82■□□□□ 0.76
CHMP1A-204ENST00000547687 ANKIB1Q9P2G1 1089 aa19.82■□□□□ 0.76
CHMP1A-204ENST00000547687 GORABQ5T7V8 394 aa19.81■□□□□ 0.76
CHMP1A-204ENST00000547687 DBNDD1Q9H9R9 158 aa19.81■□□□□ 0.76
CHMP1A-204ENST00000547687 RAD17O75943 681 aa19.81■□□□□ 0.76
CHMP1A-204ENST00000547687 PTH1RQ03431 593 aa19.81■□□□□ 0.76
CHMP1A-204ENST00000547687 WASHC4Q2M389 1173 aa19.81■□□□□ 0.76
CHMP1A-204ENST00000547687 CCDC158Q5M9N0 1113 aa19.81■□□□□ 0.76
CHMP1A-204ENST00000547687 GPC2Q8N158 579 aa19.81■□□□□ 0.76
CHMP1A-204ENST00000547687 TBC1D16Q8TBP0 767 aa19.81■□□□□ 0.76
CHMP1A-204ENST00000547687 L3MBTL3Q96JM7 780 aaPredicted RBP19.81■□□□□ 0.76
CHMP1A-204ENST00000547687 SCN9AQ15858 1988 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 TAF5LO75529 589 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 NMIQ13287 307 aaPredicted RBP19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 DOK7Q18PE1 504 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 EAPPQ56P03 285 aaPredicted RBP19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 RASEFQ8IZ41 740 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 YDJCA8MPS7 323 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 UFL1O94874 794 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 IFIT1P09914 478 aaKnown RBP19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 CXCL9Q07325 125 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 CUL4AQ13619 759 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 CLEC17AQ6ZS10 378 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 FAM227BQ96M60 508 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 TAF1DQ9H5J8 278 aaPredicted RBP19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 ZNRF3Q9ULT6 936 aa19.8■□□□□ 0.76
CHMP1A-204ENST00000547687 PUM3Q15397 648 aaKnown RBP19.79■□□□□ 0.76
CHMP1A-204ENST00000547687 TTC39AQ5SRH9 613 aa19.79■□□□□ 0.76
CHMP1A-204ENST00000547687 SMC1BQ8NDV3 1235 aa19.79■□□□□ 0.76
CHMP1A-204ENST00000547687 KCNQ5Q9NR82 932 aa19.79■□□□□ 0.76
CHMP1A-204ENST00000547687 SNAP23O00161 211 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 CYP2E1P05181 493 aaPredicted RBP19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 PTMSP20962 102 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 FGFR2P21802 821 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 NOL8Q76FK4 1167 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 HACL1Q9UJ83 578 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 IQCA1LA6NCM1 817 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 GOLIM4O00461 696 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 EPS15P42566 896 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 CHRNDQ07001 517 aa19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.78■□□□□ 0.76
CHMP1A-204ENST00000547687 LPIN2Q92539 896 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms