RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 TNRC18O15417 2968 aaPredicted RBP13□□□□□ -0.33
BEST3-208ENST00000547208 NBPF9Q3BBW0 867 aa12.99□□□□□ -0.33
BEST3-208ENST00000547208 TAF7LQ5H9L4 462 aa12.99□□□□□ -0.33
BEST3-208ENST00000547208 SULF1Q8IWU6 871 aa12.99□□□□□ -0.33
BEST3-208ENST00000547208 FBXW7Q969H0 707 aa12.99□□□□□ -0.33
BEST3-208ENST00000547208 ZBED3Q96IU2 234 aaPredicted RBP12.99□□□□□ -0.33
BEST3-208ENST00000547208 CNNM1Q9NRU3 951 aa12.99□□□□□ -0.33
BEST3-208ENST00000547208 LAMB1P07942 1786 aa12.99□□□□□ -0.33
BEST3-208ENST00000547208 WNT10BO00744 389 aa12.98□□□□□ -0.33
BEST3-208ENST00000547208 PLIN1O60240 522 aa12.98□□□□□ -0.33
BEST3-208ENST00000547208 MAP2K1Q02750 393 aaPredicted RBP12.98□□□□□ -0.33
BEST3-208ENST00000547208 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
BEST3-208ENST00000547208 MIER1Q8N108 512 aa12.98□□□□□ -0.33
BEST3-208ENST00000547208 VGLL2Q8N8G2 317 aa12.98□□□□□ -0.33
BEST3-208ENST00000547208 CDCA5Q96FF9 252 aa12.98□□□□□ -0.33
BEST3-208ENST00000547208 GBA2Q9HCG7 927 aaPredicted RBP12.98□□□□□ -0.33
BEST3-208ENST00000547208 NOB1Q9ULX3 412 aaKnown RBP12.98□□□□□ -0.33
BEST3-208ENST00000547208 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
BEST3-208ENST00000547208 MROH5Q6ZUA9 1318 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 MAP2K2P36507 400 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 RGS19P49795 217 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 MMP14P50281 582 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
BEST3-208ENST00000547208 HUNKP57058 714 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 UBE4AQ14139 1066 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 LRRC24Q50LG9 513 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 ZNF804AQ7Z570 1209 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 KIAA0825Q8IV33 1275 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 OGFOD1Q8N543 542 aa12.97□□□□□ -0.33
BEST3-208ENST00000547208 FAM155AB1AL88 458 aaPredicted RBP12.96□□□□□ -0.33
BEST3-208ENST00000547208 SASH1O94885 1247 aa12.96□□□□□ -0.33
BEST3-208ENST00000547208 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
BEST3-208ENST00000547208 FKBP1AP62942 108 aaKnown RBP12.96□□□□□ -0.33
BEST3-208ENST00000547208 MLLT1Q03111 559 aaPredicted RBP12.96□□□□□ -0.33
BEST3-208ENST00000547208 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.33
BEST3-208ENST00000547208 MCOLN1Q9GZU1 580 aa12.96□□□□□ -0.33
BEST3-208ENST00000547208 FAM205AQ6ZU69 1335 aa12.95□□□□□ -0.34
BEST3-208ENST00000547208 OTOFQ9HC10 1997 aa12.95□□□□□ -0.34
BEST3-208ENST00000547208 GYG1P46976 350 aa12.95□□□□□ -0.34
BEST3-208ENST00000547208 DIEXFQ68CQ4 756 aaKnown RBP12.95□□□□□ -0.34
BEST3-208ENST00000547208 RGMBQ6NW40 437 aa12.95□□□□□ -0.34
BEST3-208ENST00000547208 C2orf69Q8N8R5 385 aa12.95□□□□□ -0.34
BEST3-208ENST00000547208 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
BEST3-208ENST00000547208 FAM84BQ96KN1 310 aaPredicted RBP12.95□□□□□ -0.34
BEST3-208ENST00000547208 JAG2Q9Y219 1238 aa12.95□□□□□ -0.34
BEST3-208ENST00000547208 PCDHAC2Q9Y5I4 1007 aa12.95□□□□□ -0.34
BEST3-208ENST00000547208 PDE4DIPQ5VU43 2346 aa12.94□□□□□ -0.34
BEST3-208ENST00000547208 PDE8BO95263 885 aa12.94□□□□□ -0.34
BEST3-208ENST00000547208 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
BEST3-208ENST00000547208 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
BEST3-208ENST00000547208 API5Q9BZZ5 524 aaKnown RBP12.94□□□□□ -0.34
BEST3-208ENST00000547208 HDAC9Q9UKV0 1011 aa12.94□□□□□ -0.34
BEST3-208ENST00000547208 AOX1Q06278 1338 aa12.93□□□□□ -0.34
BEST3-208ENST00000547208 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
BEST3-208ENST00000547208 COL1A1P02452 1464 aaPredicted RBP12.93□□□□□ -0.34
BEST3-208ENST00000547208 HIBADHP31937 336 aaKnown RBP12.93□□□□□ -0.34
BEST3-208ENST00000547208 PTPN12Q05209 780 aaKnown RBP12.93□□□□□ -0.34
BEST3-208ENST00000547208 NOGQ13253 232 aa12.93□□□□□ -0.34
BEST3-208ENST00000547208 FBXO33Q7Z6M2 555 aa12.93□□□□□ -0.34
BEST3-208ENST00000547208 ARHGAP45Q92619 1136 aa12.93□□□□□ -0.34
BEST3-208ENST00000547208 SSC5DA1L4H1 1573 aa12.93□□□□□ -0.34
BEST3-208ENST00000547208 UBTFL1P0CB47 393 aaPredicted RBP12.92□□□□□ -0.34
BEST3-208ENST00000547208 FGFR2P21802 821 aa12.92□□□□□ -0.34
BEST3-208ENST00000547208 FKBP1BP68106 108 aa12.92□□□□□ -0.34
BEST3-208ENST00000547208 METTL24Q5JXM2 366 aa12.92□□□□□ -0.34
BEST3-208ENST00000547208 INTS3Q68E01 1043 aaKnown RBP12.92□□□□□ -0.34
BEST3-208ENST00000547208 MOB2Q70IA6 237 aa12.92□□□□□ -0.34
BEST3-208ENST00000547208 ATG9AQ7Z3C6 839 aa12.92□□□□□ -0.34
BEST3-208ENST00000547208 MEIS3Q99687 375 aa12.92□□□□□ -0.34
BEST3-208ENST00000547208 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
BEST3-208ENST00000547208 F8W031 263 aaPredicted RBP12.91□□□□□ -0.34
BEST3-208ENST00000547208 EYA2O00167 538 aa12.91□□□□□ -0.34
BEST3-208ENST00000547208 BCAR3O75815 825 aa12.91□□□□□ -0.34
BEST3-208ENST00000547208 SLC10A3P09131 477 aa12.91□□□□□ -0.34
BEST3-208ENST00000547208 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
BEST3-208ENST00000547208 DLGAP5Q15398 846 aa12.91□□□□□ -0.34
BEST3-208ENST00000547208 CFAP100Q494V2 611 aa12.91□□□□□ -0.34
BEST3-208ENST00000547208 MFSD14BQ5SR56 506 aa12.91□□□□□ -0.34
BEST3-208ENST00000547208 APOBEC3FQ8IUX4 373 aaKnown RBP12.91□□□□□ -0.34
BEST3-208ENST00000547208 PRMT6Q96LA8 375 aaPredicted RBP12.91□□□□□ -0.34
BEST3-208ENST00000547208 TNNQ9UQP3 1299 aa12.91□□□□□ -0.34
BEST3-208ENST00000547208 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
BEST3-208ENST00000547208 TRIM27P14373 513 aa12.9□□□□□ -0.34
BEST3-208ENST00000547208 ZNF157P51786 506 aaPredicted RBP12.9□□□□□ -0.34
BEST3-208ENST00000547208 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
BEST3-208ENST00000547208 GRIK5Q16478 980 aa12.9□□□□□ -0.34
BEST3-208ENST00000547208 RASAL3Q86YV0 1011 aa12.9□□□□□ -0.34
BEST3-208ENST00000547208 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
BEST3-208ENST00000547208 BEGAINQ9BUH8 593 aa12.9□□□□□ -0.34
BEST3-208ENST00000547208 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
BEST3-208ENST00000547208 CA12O43570 354 aa12.89□□□□□ -0.35
BEST3-208ENST00000547208 CIAO1O76071 339 aa12.89□□□□□ -0.35
BEST3-208ENST00000547208 BCAMP50895 628 aa12.89□□□□□ -0.35
BEST3-208ENST00000547208 SOX10P56693 466 aa12.89□□□□□ -0.35
BEST3-208ENST00000547208 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
BEST3-208ENST00000547208 KIF23Q02241 960 aaPredicted RBP12.89□□□□□ -0.35
BEST3-208ENST00000547208 DEFB129Q9H1M3 183 aa12.89□□□□□ -0.35
BEST3-208ENST00000547208 FBXO3Q9UK99 471 aa12.89□□□□□ -0.35
BEST3-208ENST00000547208 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
BEST3-208ENST00000547208 CLRN2A0PK11 232 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms