RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 NARFQ9UHQ1 456 aa22.03■■□□□ 1.12
VDR-204ENST00000547065 TCRBV5S4A2TA0A5A2 114 aa22.02■■□□□ 1.12
VDR-204ENST00000547065 KCNQ4P56696 695 aa22.02■■□□□ 1.12
VDR-204ENST00000547065 CHRNDQ07001 517 aa22.02■■□□□ 1.12
VDR-204ENST00000547065 MAP3K12Q12852 859 aa22.02■■□□□ 1.12
VDR-204ENST00000547065 BCORQ6W2J9 1755 aa22.02■■□□□ 1.12
VDR-204ENST00000547065 JAK2O60674 1132 aa22.02■■□□□ 1.11
VDR-204ENST00000547065 PHF14O94880 888 aa22.02■■□□□ 1.11
VDR-204ENST00000547065 EVCP57679 992 aa22.02■■□□□ 1.11
VDR-204ENST00000547065 RASGRF1Q13972 1273 aa22.02■■□□□ 1.11
VDR-204ENST00000547065 CDC37L1Q7L3B6 337 aa22.02■■□□□ 1.11
VDR-204ENST00000547065 ANKRD18AQ8IVF6 992 aa22.02■■□□□ 1.11
VDR-204ENST00000547065 ARAP2Q8WZ64 1704 aa22.01■■□□□ 1.11
VDR-204ENST00000547065 LAMB2P55268 1798 aa22.01■■□□□ 1.11
VDR-204ENST00000547065 MCM5P33992 734 aa22.01■■□□□ 1.11
VDR-204ENST00000547065 NASPP49321 788 aaPredicted RBP22.01■■□□□ 1.11
VDR-204ENST00000547065 HAND2P61296 217 aa22.01■■□□□ 1.11
VDR-204ENST00000547065 HMGN5P82970 282 aaKnown RBP22.01■■□□□ 1.11
VDR-204ENST00000547065 NCOA7Q8NI08 942 aa22.01■■□□□ 1.11
VDR-204ENST00000547065 NYXQ9GZU5 481 aa22.01■■□□□ 1.11
VDR-204ENST00000547065 BCL2L12Q9HB09 334 aa22.01■■□□□ 1.11
VDR-204ENST00000547065 WWC3Q9ULE0 1092 aa22.01■■□□□ 1.11
VDR-204ENST00000547065 SYCE3A1L190 88 aa22■■□□□ 1.11
VDR-204ENST00000547065 SNAP23O00161 211 aa22■■□□□ 1.11
VDR-204ENST00000547065 FIBPO43427 364 aa22■■□□□ 1.11
VDR-204ENST00000547065 GTF2E1P29083 439 aaPredicted RBP22■■□□□ 1.11
VDR-204ENST00000547065 PDIA3P30101 505 aaKnown RBP22■■□□□ 1.11
VDR-204ENST00000547065 TBC1D9BQ66K14 1250 aa22■■□□□ 1.11
VDR-204ENST00000547065 FAM184AQ8NB25 1140 aa22■■□□□ 1.11
VDR-204ENST00000547065 BSDC1Q9NW68 430 aaPredicted RBP22■■□□□ 1.11
VDR-204ENST00000547065 KIF3AQ9Y496 699 aa22■■□□□ 1.11
VDR-204ENST00000547065 WDR19Q8NEZ3 1342 aa22■■□□□ 1.11
VDR-204ENST00000547065 BCAMP50895 628 aa21.99■■□□□ 1.11
VDR-204ENST00000547065 KRT85P78386 507 aa21.99■■□□□ 1.11
VDR-204ENST00000547065 ALX1Q15699 326 aa21.99■■□□□ 1.11
VDR-204ENST00000547065 MB21D2Q8IYB1 491 aaPredicted RBP21.99■■□□□ 1.11
VDR-204ENST00000547065 STRBPQ96SI9 672 aaKnown RBP21.99■■□□□ 1.11
VDR-204ENST00000547065 ZPR1O75312 459 aa21.99■■□□□ 1.11
VDR-204ENST00000547065 RALYLQ86SE5 291 aaKnown RBP21.99■■□□□ 1.11
VDR-204ENST00000547065 NSUN7Q8NE18 718 aaKnown RBP21.99■■□□□ 1.11
VDR-204ENST00000547065 AIDAQ96BJ3 306 aa21.99■■□□□ 1.11
VDR-204ENST00000547065 GJD4Q96KN9 370 aaPredicted RBP21.99■■□□□ 1.11
VDR-204ENST00000547065 SETDB2Q96T68 719 aa21.99■■□□□ 1.11
VDR-204ENST00000547065 CCNL1Q9UK58 526 aaPredicted RBP21.99■■□□□ 1.11
VDR-204ENST00000547065 MYH7P12883 1935 aa21.99■■□□□ 1.11
VDR-204ENST00000547065 PRC1O43663 620 aa21.98■■□□□ 1.11
VDR-204ENST00000547065 LETM1O95202 739 aaPredicted RBP21.98■■□□□ 1.11
VDR-204ENST00000547065 LAMA4Q16363 1823 aa21.98■■□□□ 1.11
VDR-204ENST00000547065 BICDL1Q6ZP65 573 aa21.98■■□□□ 1.11
VDR-204ENST00000547065 CHST3Q7LGC8 479 aa21.98■■□□□ 1.11
VDR-204ENST00000547065 ANP32BQ92688 251 aaKnown RBP21.98■■□□□ 1.11
VDR-204ENST00000547065 THSD7AQ9UPZ6 1657 aa21.98■■□□□ 1.11
VDR-204ENST00000547065 PATL2C9JE40 543 aaKnown RBP21.97■■□□□ 1.11
VDR-204ENST00000547065 H3BQV1 296 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 APPP05067 770 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 UBE4AQ14139 1066 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 CCDC183Q5T5S1 534 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 IFFO2Q5TF58 517 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 MEX3CQ5U5Q3 659 aaKnown RBP21.97■■□□□ 1.11
VDR-204ENST00000547065 C3orf67Q6ZVT6 689 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 FERMT3Q86UX7 667 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 KLHL34Q8N239 644 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 RBSNQ9H1K0 784 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 RTCBQ9Y3I0 505 aaKnown RBP21.97■■□□□ 1.11
VDR-204ENST00000547065 GNPATO15228 680 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 CTDNEP1O95476 244 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 TRDNQ13061 729 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 MAGEB6Q8N7X4 407 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 DDX11Q96FC9 970 aa21.97■■□□□ 1.11
VDR-204ENST00000547065 ZSCAN16Q9H4T2 348 aaPredicted RBP21.97■■□□□ 1.11
VDR-204ENST00000547065 GNL3LQ9NVN8 582 aaKnown RBP21.97■■□□□ 1.11
VDR-204ENST00000547065 ELP1O95163 1332 aa21.96■■□□□ 1.11
VDR-204ENST00000547065 CCT2P78371 535 aaKnown RBP21.96■■□□□ 1.11
VDR-204ENST00000547065 NAA16Q6N069 864 aaPredicted RBP21.96■■□□□ 1.11
VDR-204ENST00000547065 SCAND2PQ9GZW5 306 aaPredicted RBP21.96■■□□□ 1.11
VDR-204ENST00000547065 NAP1L2Q9ULW6 460 aaPredicted RBP21.96■■□□□ 1.11
VDR-204ENST00000547065 ZMYM6O95789 1325 aa21.95■■□□□ 1.1
VDR-204ENST00000547065 PTPDC1A2A3K4 754 aa21.95■■□□□ 1.1
VDR-204ENST00000547065 NLRP3Q96P20 1036 aa21.95■■□□□ 1.1
VDR-204ENST00000547065 SRP68Q9UHB9 627 aaKnown RBP21.95■■□□□ 1.1
VDR-204ENST00000547065 ONECUT3O60422 494 aaPredicted RBP21.94■■□□□ 1.1
VDR-204ENST00000547065 TPTE2Q6XPS3 522 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 SMIM5Q71RC9 77 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 NBPF5PQ86XG9 351 aaPredicted RBP21.94■■□□□ 1.1
VDR-204ENST00000547065 FAM43AQ8N2R8 423 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 MINPP1Q9UNW1 487 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 TCHHQ07283 1943 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 NHSQ6T4R5 1651 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 DHX16O60231 1041 aaKnown RBP21.94■■□□□ 1.1
VDR-204ENST00000547065 GNAT2P19087 354 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 CCDC173Q0VFZ6 552 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 RESTQ13127 1097 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 TSPY26PQ9H489 355 aa21.94■■□□□ 1.1
VDR-204ENST00000547065 ZNF804BA4D1E1 1349 aa21.93■■□□□ 1.1
VDR-204ENST00000547065 BTAF1O14981 1849 aa21.93■■□□□ 1.1
VDR-204ENST00000547065 ANTXR2P58335 489 aa21.93■■□□□ 1.1
VDR-204ENST00000547065 FAM182BQ5T319 152 aa21.93■■□□□ 1.1
VDR-204ENST00000547065 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
VDR-204ENST00000547065 PPP1R9BQ96SB3 815 aa21.93■■□□□ 1.1
VDR-204ENST00000547065 NBPF3Q9H094 633 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms