RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 MYH7P12883 1935 aa23.32■■□□□ 1.32
SKP2-208ENST00000546211 PDS5AQ29RF7 1337 aaKnown RBP23.32■■□□□ 1.32
SKP2-208ENST00000546211 ZBTB22O15209 634 aa23.32■■□□□ 1.32
SKP2-208ENST00000546211 SLC4A3P48751 1232 aa23.32■■□□□ 1.32
SKP2-208ENST00000546211 ZNF804AQ7Z570 1209 aa23.32■■□□□ 1.32
SKP2-208ENST00000546211 OSBP2Q969R2 916 aa23.32■■□□□ 1.32
SKP2-208ENST00000546211 M0R2C6 588 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 PDE6AP16499 860 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 NECTIN1Q15223 517 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 RNF20Q5VTR2 975 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 PRPF40BQ6NWY9 871 aaKnown RBP23.31■■□□□ 1.32
SKP2-208ENST00000546211 TXNRD3Q86VQ6 643 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 LRP2BPQ9P2M1 347 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 DOCK2Q92608 1830 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 TBC1D16Q8TBP0 767 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 UPF1Q92900 1129 aaKnown RBP eCLIP23.31■■□□□ 1.32
SKP2-208ENST00000546211 WWC3Q9ULE0 1092 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 SNX14Q9Y5W7 946 aa23.31■■□□□ 1.32
SKP2-208ENST00000546211 U3KPZ7 1027 aaPredicted RBP23.31■■□□□ 1.32
SKP2-208ENST00000546211 COL1A1P02452 1464 aaPredicted RBP23.3■■□□□ 1.32
SKP2-208ENST00000546211 ZNF532Q9HCE3 1301 aa23.3■■□□□ 1.32
SKP2-208ENST00000546211 ST18O60284 1047 aa23.3■■□□□ 1.32
SKP2-208ENST00000546211 ZKSCAN1P17029 563 aaPredicted RBP23.3■■□□□ 1.32
SKP2-208ENST00000546211 CNKSR1Q969H4 720 aa23.3■■□□□ 1.32
SKP2-208ENST00000546211 DSCC1Q9BVC3 393 aa23.3■■□□□ 1.32
SKP2-208ENST00000546211 C10orf71Q711Q0 1435 aa23.29■■□□□ 1.32
SKP2-208ENST00000546211 C6orf229H3BNL8 230 aa23.29■■□□□ 1.32
SKP2-208ENST00000546211 CREB3L3Q68CJ9 461 aa23.29■■□□□ 1.32
SKP2-208ENST00000546211 IL27Q8NEV9 243 aa23.29■■□□□ 1.32
SKP2-208ENST00000546211 KCNB2Q92953 911 aa23.29■■□□□ 1.32
SKP2-208ENST00000546211 ABCF2Q9UG63 623 aa23.29■■□□□ 1.32
SKP2-208ENST00000546211 MPNDQ8N594 471 aa23.28■■□□□ 1.32
SKP2-208ENST00000546211 MAGEB6Q8N7X4 407 aa23.28■■□□□ 1.32
SKP2-208ENST00000546211 PUS7LQ9H0K6 701 aaKnown RBP23.28■■□□□ 1.32
SKP2-208ENST00000546211 POLLQ9UGP5 575 aa23.28■■□□□ 1.32
SKP2-208ENST00000546211 TCRBV5S4A2TA0A5A2 114 aa23.27■■□□□ 1.32
SKP2-208ENST00000546211 CHRNA5P30532 468 aa23.27■■□□□ 1.32
SKP2-208ENST00000546211 RASEFQ8IZ41 740 aa23.27■■□□□ 1.32
SKP2-208ENST00000546211 GPR101Q96P66 508 aaPredicted RBP23.27■■□□□ 1.32
SKP2-208ENST00000546211 LTBP1Q14766 1721 aa23.27■■□□□ 1.32
SKP2-208ENST00000546211 SLC27A2O14975 620 aa23.27■■□□□ 1.32
SKP2-208ENST00000546211 GPAA1O43292 621 aa23.27■■□□□ 1.32
SKP2-208ENST00000546211 HSPD1P10809 573 aaKnown RBP23.27■■□□□ 1.32
SKP2-208ENST00000546211 CHAF1AQ13111 956 aaPredicted RBP23.27■■□□□ 1.32
SKP2-208ENST00000546211 DPP8Q6V1X1 898 aaPredicted RBP23.27■■□□□ 1.32
SKP2-208ENST00000546211 RAI14Q9P0K7 980 aa23.27■■□□□ 1.32
SKP2-208ENST00000546211 ZBTB7AO95365 584 aa23.26■■□□□ 1.31
SKP2-208ENST00000546211 NEK4P51957 841 aa23.26■■□□□ 1.31
SKP2-208ENST00000546211 TDRD7Q8NHU6 1098 aaKnown RBP23.26■■□□□ 1.31
SKP2-208ENST00000546211 MYO5AQ9Y4I1 1855 aaKnown RBP23.26■■□□□ 1.31
SKP2-208ENST00000546211 MYH13Q9UKX3 1938 aa23.25■■□□□ 1.31
SKP2-208ENST00000546211 VPS53Q5VIR6 699 aa23.25■■□□□ 1.31
SKP2-208ENST00000546211 MTFR1LQ9H019 292 aa23.25■■□□□ 1.31
SKP2-208ENST00000546211 POLD1P28340 1107 aa23.24■■□□□ 1.31
SKP2-208ENST00000546211 R3HDM1Q15032 1099 aaKnown RBP23.24■■□□□ 1.31
SKP2-208ENST00000546211 ERICH6Q7L0X2 663 aa23.24■■□□□ 1.31
SKP2-208ENST00000546211 ZGPATQ8N5A5 531 aaKnown RBP23.24■■□□□ 1.31
SKP2-208ENST00000546211 WDR66Q8TBY9 1149 aa23.24■■□□□ 1.31
SKP2-208ENST00000546211 AIDAQ96BJ3 306 aa23.24■■□□□ 1.31
SKP2-208ENST00000546211 CD209Q9NNX6 404 aa23.24■■□□□ 1.31
SKP2-208ENST00000546211 K7ELQ4 463 aaPredicted RBP23.23■■□□□ 1.31
SKP2-208ENST00000546211 CD2BP2O95400 341 aaKnown RBP23.23■■□□□ 1.31
SKP2-208ENST00000546211 SPTY2D1Q68D10 685 aaPredicted RBP23.23■■□□□ 1.31
SKP2-208ENST00000546211 OLFM4Q6UX06 510 aa23.23■■□□□ 1.31
SKP2-208ENST00000546211 TM6SF1Q9BZW5 370 aa23.23■■□□□ 1.31
SKP2-208ENST00000546211 CTNNA3Q9UI47 895 aa23.23■■□□□ 1.31
SKP2-208ENST00000546211 CACNA1SQ13698 1873 aa23.22■■□□□ 1.31
SKP2-208ENST00000546211 SALL1Q9NSC2 1324 aa23.22■■□□□ 1.31
SKP2-208ENST00000546211 IGSF3O75054 1194 aa23.22■■□□□ 1.31
SKP2-208ENST00000546211 IL1R1P14778 569 aa23.22■■□□□ 1.31
SKP2-208ENST00000546211 CYP7A1P22680 504 aa23.22■■□□□ 1.31
SKP2-208ENST00000546211 PSMA5P28066 241 aa23.22■■□□□ 1.31
SKP2-208ENST00000546211 KRT32Q14532 448 aa23.22■■□□□ 1.31
SKP2-208ENST00000546211 TSGA10IPQ3SY00 556 aa23.22■■□□□ 1.31
SKP2-208ENST00000546211 JAKMIP1Q96N16 626 aaKnown RBP23.22■■□□□ 1.31
SKP2-208ENST00000546211 EYA3Q99504 573 aa23.22■■□□□ 1.31
SKP2-208ENST00000546211 UPF3BQ9BZI7 483 aaKnown RBP23.22■■□□□ 1.31
SKP2-208ENST00000546211 ZC3H12CQ9C0D7 883 aaKnown RBP23.22■■□□□ 1.31
SKP2-208ENST00000546211 ATF5Q9Y2D1 282 aaPredicted RBP23.22■■□□□ 1.31
SKP2-208ENST00000546211 MCM2P49736 904 aa23.21■■□□□ 1.31
SKP2-208ENST00000546211 TMED8Q6PL24 325 aaPredicted RBP23.21■■□□□ 1.31
SKP2-208ENST00000546211 DUOX1Q9NRD9 1551 aa23.21■■□□□ 1.31
SKP2-208ENST00000546211 CASTP20810 708 aaKnown RBP23.2■■□□□ 1.3
SKP2-208ENST00000546211 CC2D2BQ6DHV5 1058 aa23.2■■□□□ 1.3
SKP2-208ENST00000546211 NAA16Q6N069 864 aaPredicted RBP23.2■■□□□ 1.3
SKP2-208ENST00000546211 COA1Q9GZY4 146 aa23.2■■□□□ 1.3
SKP2-208ENST00000546211 RIMBP2O15034 1052 aa23.19■■□□□ 1.3
SKP2-208ENST00000546211 MBD4O95243 580 aa23.19■■□□□ 1.3
SKP2-208ENST00000546211 CYP21A2P08686 494 aa23.19■■□□□ 1.3
SKP2-208ENST00000546211 ADCK5Q3MIX3 580 aa23.19■■□□□ 1.3
SKP2-208ENST00000546211 STRBPQ96SI9 672 aaKnown RBP23.19■■□□□ 1.3
SKP2-208ENST00000546211 ZNF219Q9P2Y4 722 aaPredicted RBP23.19■■□□□ 1.3
SKP2-208ENST00000546211 JAG2Q9Y219 1238 aa23.19■■□□□ 1.3
SKP2-208ENST00000546211 CYP46A1Q9Y6A2 500 aa23.19■■□□□ 1.3
SKP2-208ENST00000546211 SLX4Q8IY92 1834 aa23.19■■□□□ 1.3
SKP2-208ENST00000546211 ZSWIM6Q9HCJ5 1215 aa23.18■■□□□ 1.3
SKP2-208ENST00000546211 DLEC1Q9Y238 1755 aa23.18■■□□□ 1.3
SKP2-208ENST00000546211 RPAP1Q9BWH6 1393 aaPredicted RBP23.18■■□□□ 1.3
SKP2-208ENST00000546211 FOXP2O15409 715 aa23.18■■□□□ 1.3
SKP2-208ENST00000546211 GNAT2P19087 354 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms