RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 E7EWF7 191 aa16.45■□□□□ 0.22
SRP54-202ENST00000546080 TULP2O00295 520 aa16.45■□□□□ 0.22
SRP54-202ENST00000546080 YEATS4O95619 227 aa16.45■□□□□ 0.22
SRP54-202ENST00000546080 HNRNPH2P55795 449 aaKnown RBP16.45■□□□□ 0.22
SRP54-202ENST00000546080 MYD88Q99836 296 aa16.45■□□□□ 0.22
SRP54-202ENST00000546080 EFCAB8A8MWE9 144 aa16.45■□□□□ 0.22
SRP54-202ENST00000546080 SPTLC2O15270 562 aa16.45■□□□□ 0.22
SRP54-202ENST00000546080 POLR3GO15318 223 aaPredicted RBP16.45■□□□□ 0.22
SRP54-202ENST00000546080 TADA3O75528 432 aa16.45■□□□□ 0.22
SRP54-202ENST00000546080 ZNF202O95125 648 aa16.45■□□□□ 0.22
SRP54-202ENST00000546080 PTPN12Q05209 780 aaKnown RBP16.45■□□□□ 0.22
SRP54-202ENST00000546080 POLR3EQ9NVU0 708 aa16.45■□□□□ 0.22
SRP54-202ENST00000546080 IKBKBO14920 756 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 PDIA6Q15084 440 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 CARD6Q9BX69 1037 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 HELLSQ9NRZ9 838 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 RGPD2P0DJD1 1756 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 NFAT5O94916 1531 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 PALLDQ8WX93 1383 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 CBFA2T2O43439 604 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 ATP8B1O43520 1251 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
SRP54-202ENST00000546080 FDPSP14324 419 aaKnown RBP16.44■□□□□ 0.22
SRP54-202ENST00000546080 RFX5P48382 616 aaPredicted RBP16.44■□□□□ 0.22
SRP54-202ENST00000546080 PSME1Q06323 249 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 LRRFIP1Q32MZ4 808 aaKnown RBP16.44■□□□□ 0.22
SRP54-202ENST00000546080 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 TRIM65Q6PJ69 517 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 CHST3Q7LGC8 479 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 C8orf76Q96K31 380 aa16.44■□□□□ 0.22
SRP54-202ENST00000546080 SEC31AO94979 1220 aaKnown RBP16.43■□□□□ 0.22
SRP54-202ENST00000546080 MYL6BP14649 208 aa16.43■□□□□ 0.22
SRP54-202ENST00000546080 UBASH3AP57075 661 aa16.43■□□□□ 0.22
SRP54-202ENST00000546080 SLC20A2Q08357 652 aa16.43■□□□□ 0.22
SRP54-202ENST00000546080 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
SRP54-202ENST00000546080 CCDC9Q9Y3X0 531 aaKnown RBP16.43■□□□□ 0.22
SRP54-202ENST00000546080 SERPINC1P01008 464 aa16.43■□□□□ 0.22
SRP54-202ENST00000546080 ATP1A3P13637 1013 aa16.43■□□□□ 0.22
SRP54-202ENST00000546080 TXLNBQ8N3L3 684 aa16.43■□□□□ 0.22
SRP54-202ENST00000546080 METTL22Q9BUU2 404 aaPredicted RBP16.43■□□□□ 0.22
SRP54-202ENST00000546080 UTP14AQ9BVJ6 771 aaKnown RBP16.43■□□□□ 0.22
SRP54-202ENST00000546080 TSPYL1Q9H0U9 437 aa16.43■□□□□ 0.22
SRP54-202ENST00000546080 GOLIM4O00461 696 aa16.42■□□□□ 0.22
SRP54-202ENST00000546080 ZSCAN12O43309 604 aa16.42■□□□□ 0.22
SRP54-202ENST00000546080 EVCP57679 992 aa16.42■□□□□ 0.22
SRP54-202ENST00000546080 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
SRP54-202ENST00000546080 ISM2Q6H9L7 571 aa16.42■□□□□ 0.22
SRP54-202ENST00000546080 SYNE3Q6ZMZ3 975 aa16.42■□□□□ 0.22
SRP54-202ENST00000546080 BRAPQ7Z569 592 aa16.42■□□□□ 0.22
SRP54-202ENST00000546080 FCHSD1Q86WN1 690 aa16.42■□□□□ 0.22
SRP54-202ENST00000546080 PARP3Q9Y6F1 533 aa16.42■□□□□ 0.22
SRP54-202ENST00000546080 SETD1BQ9UPS6 1966 aaKnown RBP16.42■□□□□ 0.22
SRP54-202ENST00000546080 A0A0G2JLW4 131 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 VGLL3A8MV65 326 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 HSPD1P10809 573 aaKnown RBP16.41■□□□□ 0.22
SRP54-202ENST00000546080 PFKFB1P16118 471 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 CAPN2P17655 700 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 CFAP100Q494V2 611 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 REXO1L1PQ8IX06 675 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 NEK11Q8NG66 645 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 TMX1Q9H3N1 280 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 PAG1Q9NWQ8 432 aa16.41■□□□□ 0.22
SRP54-202ENST00000546080 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
SRP54-202ENST00000546080 CMA1P23946 247 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 MYL5Q02045 173 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 DPF2Q92785 391 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 FANCGO15287 622 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 OAS2P29728 719 aaKnown RBP16.4■□□□□ 0.22
SRP54-202ENST00000546080 GPS2Q13227 327 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 ZMYM1Q5SVZ6 1142 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 ANO1Q5XXA6 986 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
SRP54-202ENST00000546080 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
SRP54-202ENST00000546080 KCNH5Q8NCM2 988 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 MPHOSPH8Q99549 860 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 HSD3B7Q9H2F3 369 aa16.4■□□□□ 0.22
SRP54-202ENST00000546080 CASQ1P31415 396 aa16.39■□□□□ 0.21
SRP54-202ENST00000546080 RAD51AP2Q09MP3 1159 aa16.39■□□□□ 0.21
SRP54-202ENST00000546080 RABL6Q3YEC7 729 aaPredicted RBP16.39■□□□□ 0.21
SRP54-202ENST00000546080 CC2D1AQ6P1N0 951 aaPredicted RBP16.39■□□□□ 0.21
SRP54-202ENST00000546080 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
SRP54-202ENST00000546080 VSTM4Q8IW00 320 aa16.39■□□□□ 0.21
SRP54-202ENST00000546080 FBXO18Q8NFZ0 1043 aa16.39■□□□□ 0.21
SRP54-202ENST00000546080 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.21
SRP54-202ENST00000546080 MROH7-TTC4A0A0A0MT08 1334 aa16.39■□□□□ 0.21
SRP54-202ENST00000546080 VWA3AA6NCI4 1184 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 ARHGAP6O43182 974 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
SRP54-202ENST00000546080 TBC1D8O95759 1140 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 SYKP43405 635 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 GNL2Q13823 731 aaKnown RBP16.38■□□□□ 0.21
SRP54-202ENST00000546080 AXDND1Q5T1B0 1012 aaPredicted RBP16.38■□□□□ 0.21
SRP54-202ENST00000546080 GPR161Q8N6U8 529 aaKnown RBP16.38■□□□□ 0.21
SRP54-202ENST00000546080 NEUROD6Q96NK8 337 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 UBXN6Q9BZV1 441 aa16.38■□□□□ 0.21
SRP54-202ENST00000546080 PHF8Q9UPP1 1060 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms