RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SUPT20HL1Q3ZLR7 823 aa18.96■□□□□ 0.63
RTN3-214ENST00000545432 EN2P19622 333 aaPredicted RBP18.95■□□□□ 0.62
RTN3-214ENST00000545432 CRHR2Q13324 411 aa18.95■□□□□ 0.62
RTN3-214ENST00000545432 OTUD7BQ6GQQ9 843 aa18.95■□□□□ 0.62
RTN3-214ENST00000545432 CD99L2Q8TCZ2 262 aa18.95■□□□□ 0.62
RTN3-214ENST00000545432 FBXW7Q969H0 707 aa18.95■□□□□ 0.62
RTN3-214ENST00000545432 EFCC1Q9HA90 598 aa18.95■□□□□ 0.62
RTN3-214ENST00000545432 BRCA2P51587 3418 aa18.94■□□□□ 0.62
RTN3-214ENST00000545432 SPDYE2BA6NHP3 402 aa18.94■□□□□ 0.62
RTN3-214ENST00000545432 SPDYE6P0CI01 402 aa18.94■□□□□ 0.62
RTN3-214ENST00000545432 IL1R1P14778 569 aa18.94■□□□□ 0.62
RTN3-214ENST00000545432 ITGA6P23229 1130 aa18.94■□□□□ 0.62
RTN3-214ENST00000545432 SP3Q02447 781 aa18.94■□□□□ 0.62
RTN3-214ENST00000545432 ZNF333Q96JL9 665 aa18.94■□□□□ 0.62
RTN3-214ENST00000545432 PRMT6Q96LA8 375 aaPredicted RBP18.94■□□□□ 0.62
RTN3-214ENST00000545432 CHRNDQ07001 517 aa18.93■□□□□ 0.62
RTN3-214ENST00000545432 NEXNQ0ZGT2 675 aa18.93■□□□□ 0.62
RTN3-214ENST00000545432 CWF19L2Q2TBE0 894 aaKnown RBP18.93■□□□□ 0.62
RTN3-214ENST00000545432 NBPF12Q5TAG4 269 aaPredicted RBP18.93■□□□□ 0.62
RTN3-214ENST00000545432 TSPYL6Q8N831 410 aa18.93■□□□□ 0.62
RTN3-214ENST00000545432 MS4A4AQ96JQ5 239 aa18.93■□□□□ 0.62
RTN3-214ENST00000545432 PCDHAC2Q9Y5I4 1007 aa18.93■□□□□ 0.62
RTN3-214ENST00000545432 CENPFP49454 3210 aa18.92■□□□□ 0.62
RTN3-214ENST00000545432 IREB2P48200 963 aaKnown RBP18.92■□□□□ 0.62
RTN3-214ENST00000545432 CFAP100Q494V2 611 aa18.92■□□□□ 0.62
RTN3-214ENST00000545432 UBE3BQ7Z3V4 1068 aa18.92■□□□□ 0.62
RTN3-214ENST00000545432 ANKRD13AQ8IZ07 590 aa18.92■□□□□ 0.62
RTN3-214ENST00000545432 APAF1O14727 1248 aa18.91■□□□□ 0.62
RTN3-214ENST00000545432 GCKRQ14397 625 aa18.91■□□□□ 0.62
RTN3-214ENST00000545432 MYH3P11055 1940 aa18.91■□□□□ 0.62
RTN3-214ENST00000545432 AOX1Q06278 1338 aa18.91■□□□□ 0.62
RTN3-214ENST00000545432 MPHOSPH8Q99549 860 aa18.9■□□□□ 0.62
RTN3-214ENST00000545432 MYO1BO43795 1136 aa18.89■□□□□ 0.61
RTN3-214ENST00000545432 RASA3Q14644 834 aa18.89■□□□□ 0.61
RTN3-214ENST00000545432 COLQQ9Y215 455 aaPredicted RBP18.89■□□□□ 0.61
RTN3-214ENST00000545432 SNAP23O00161 211 aa18.88■□□□□ 0.61
RTN3-214ENST00000545432 G2E3Q7L622 706 aa18.88■□□□□ 0.61
RTN3-214ENST00000545432 TEPSINQ96N21 525 aa18.88■□□□□ 0.61
RTN3-214ENST00000545432 TMEM106CQ9BVX2 250 aa18.88■□□□□ 0.61
RTN3-214ENST00000545432 CLRN2A0PK11 232 aa18.87■□□□□ 0.61
RTN3-214ENST00000545432 ARHGEF6Q15052 776 aa18.87■□□□□ 0.61
RTN3-214ENST00000545432 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.87■□□□□ 0.61
RTN3-214ENST00000545432 FAM205AQ6ZU69 1335 aa18.87■□□□□ 0.61
RTN3-214ENST00000545432 BRI3BPQ8WY22 251 aa18.87■□□□□ 0.61
RTN3-214ENST00000545432 OTUD5Q96G74 571 aa18.87■□□□□ 0.61
RTN3-214ENST00000545432 KCNJ4P48050 445 aa18.86■□□□□ 0.61
RTN3-214ENST00000545432 SPDYE2Q495Y8 402 aa18.86■□□□□ 0.61
RTN3-214ENST00000545432 NBPF11Q86T75 865 aa18.86■□□□□ 0.61
RTN3-214ENST00000545432 OPTNQ96CV9 577 aa18.86■□□□□ 0.61
RTN3-214ENST00000545432 ECM29Q5VYK3 1845 aa18.86■□□□□ 0.61
RTN3-214ENST00000545432 CEP290O15078 2479 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 ANKRD18BA2A2Z9 1011 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 TAF5LO75529 589 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 FOXO4P98177 505 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 ZNF804AQ7Z570 1209 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 LINS1Q8NG48 757 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 STK31Q9BXU1 1019 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 SERPINA10Q9UK55 444 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 PTCH2Q9Y6C5 1203 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 SPEF2Q9C093 1822 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 TRIOBPQ9H2D6 2365 aa18.85■□□□□ 0.61
RTN3-214ENST00000545432 SLC4A2P04920 1241 aa18.84■□□□□ 0.61
RTN3-214ENST00000545432 TNFAIP1Q13829 316 aa18.84■□□□□ 0.61
RTN3-214ENST00000545432 VEZTQ9HBM0 779 aa18.84■□□□□ 0.61
RTN3-214ENST00000545432 ZFYVE28Q9HCC9 887 aa18.84■□□□□ 0.61
RTN3-214ENST00000545432 ZNF70Q9UC06 446 aaPredicted RBP18.84■□□□□ 0.61
RTN3-214ENST00000545432 GTF2A2P52657 109 aa18.83■□□□□ 0.6
RTN3-214ENST00000545432 MAP3K9P80192 1104 aa18.83■□□□□ 0.6
RTN3-214ENST00000545432 HELBQ8NG08 1087 aaPredicted RBP18.83■□□□□ 0.6
RTN3-214ENST00000545432 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.83■□□□□ 0.6
RTN3-214ENST00000545432 TDRD7Q8NHU6 1098 aaKnown RBP18.83■□□□□ 0.6
RTN3-214ENST00000545432 MYH16Q9H6N6 1097 aa18.83■□□□□ 0.6
RTN3-214ENST00000545432 ELP3Q9H9T3 547 aa18.83■□□□□ 0.6
RTN3-214ENST00000545432 ZCCHC17Q9NP64 241 aaKnown RBP18.83■□□□□ 0.6
RTN3-214ENST00000545432 F8W031 263 aaPredicted RBP18.82■□□□□ 0.6
RTN3-214ENST00000545432 FLIIQ13045 1269 aa18.82■□□□□ 0.6
RTN3-214ENST00000545432 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
RTN3-214ENST00000545432 TAF1CQ15572 869 aaPredicted RBP18.82■□□□□ 0.6
RTN3-214ENST00000545432 CCDC27Q2M243 656 aa18.82■□□□□ 0.6
RTN3-214ENST00000545432 SLC9C1Q4G0N8 1177 aa18.82■□□□□ 0.6
RTN3-214ENST00000545432 FAM43AQ8N2R8 423 aa18.82■□□□□ 0.6
RTN3-214ENST00000545432 DNAAF4Q8WXU2 420 aa18.82■□□□□ 0.6
RTN3-214ENST00000545432 TLR2O60603 784 aa18.81■□□□□ 0.6
RTN3-214ENST00000545432 GNRH1P01148 92 aa18.81■□□□□ 0.6
RTN3-214ENST00000545432 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
RTN3-214ENST00000545432 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
RTN3-214ENST00000545432 CDAN1Q8IWY9 1227 aa18.81■□□□□ 0.6
RTN3-214ENST00000545432 CNKSR2Q8WXI2 1034 aa18.81■□□□□ 0.6
RTN3-214ENST00000545432 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
RTN3-214ENST00000545432 CCL15-CCL14A0A0B4J2E2 113 aa18.8■□□□□ 0.6
RTN3-214ENST00000545432 SPDYE5A6NIY4 337 aa18.8■□□□□ 0.6
RTN3-214ENST00000545432 H0YGN5 161 aa18.8■□□□□ 0.6
RTN3-214ENST00000545432 PRMT2P55345 433 aa18.8■□□□□ 0.6
RTN3-214ENST00000545432 VGLL4Q14135 290 aa18.8■□□□□ 0.6
RTN3-214ENST00000545432 CCL15Q16663 113 aa18.8■□□□□ 0.6
RTN3-214ENST00000545432 TDRD3Q9H7E2 651 aaKnown RBP18.8■□□□□ 0.6
RTN3-214ENST00000545432 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
RTN3-214ENST00000545432 LACTBP83111 547 aaPredicted RBP18.79■□□□□ 0.6
RTN3-214ENST00000545432 NCBP3Q53F19 620 aaKnown RBP18.79■□□□□ 0.6
RTN3-214ENST00000545432 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms