RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CDC5LQ99459 802 aaKnown RBP9.32□□□□□ -0.92
CPSF7-224ENST00000544990 PLA2G12BQ9BX93 195 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 RTFDC1Q9BY42 306 aaPredicted RBP9.32□□□□□ -0.92
CPSF7-224ENST00000544990 SRCIN1Q9C0H9 1055 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 C9orf78Q9NZ63 289 aaPredicted RBP9.32□□□□□ -0.92
CPSF7-224ENST00000544990 NSFL1CQ9UNZ2 370 aaKnown RBP9.32□□□□□ -0.92
CPSF7-224ENST00000544990 WDR90Q96KV7 1748 aa9.31□□□□□ -0.92
CPSF7-224ENST00000544990 IQCA1LA6NCM1 817 aa9.31□□□□□ -0.92
CPSF7-224ENST00000544990 EYA3Q99504 573 aa9.31□□□□□ -0.92
CPSF7-224ENST00000544990 SMC4Q9NTJ3 1288 aa9.31□□□□□ -0.92
CPSF7-224ENST00000544990 LRRC37AA6NMS7 1700 aa9.31□□□□□ -0.92
CPSF7-224ENST00000544990 RTL9Q8NET4 1388 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 TRIM6-TRIM34B2RNG4 842 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 C6orf229H3BNL8 230 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 GRM8O00222 908 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 IGHMBP2P38935 993 aaKnown RBP9.3□□□□□ -0.92
CPSF7-224ENST00000544990 CASP7P55210 303 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 KIAA2012Q0VF49 1180 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 AOC3Q16853 763 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 WASHC4Q2M389 1173 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 GPC2Q8N158 579 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 BEGAINQ9BUH8 593 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 BCL2L13Q9BXK5 485 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 GREM2Q9H772 168 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 FAM217BQ9NTX9 383 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-224ENST00000544990 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 PNMA3Q9UL41 463 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 ZNRF3Q9ULT6 936 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 SCN4AP35499 1836 aa9.3□□□□□ -0.92
CPSF7-224ENST00000544990 ANKRD18BA2A2Z9 1011 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 CSF1RP07333 972 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 ITGA6P23229 1130 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 GPSM2P81274 684 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 FSTL1Q12841 308 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 NUDT18Q6ZVK8 323 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 SLC51AQ86UW1 340 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 SMC1BQ8NDV3 1235 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 NLRP7Q8WX94 980 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 MPHOSPH8Q99549 860 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 ZC3H12CQ9C0D7 883 aaKnown RBP9.29□□□□□ -0.92
CPSF7-224ENST00000544990 BSDC1Q9NW68 430 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-224ENST00000544990 PODXL2Q9NZ53 605 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 GGA1Q9UJY5 639 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 CHMP3Q9Y3E7 222 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 GJA3Q9Y6H8 435 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 ZNF541Q9H0D2 1346 aa9.29□□□□□ -0.92
CPSF7-224ENST00000544990 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 POTECB2RU33 542 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 LMOD1P29536 600 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-224ENST00000544990 IFIT5Q13325 482 aaKnown RBP9.28□□□□□ -0.92
CPSF7-224ENST00000544990 TNIP1Q15025 636 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 DIXDC1Q155Q3 683 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 SULF1Q8IWU6 871 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 TBC1D16Q8TBP0 767 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 TATDN2Q93075 761 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 API5Q9BZZ5 524 aaKnown RBP9.28□□□□□ -0.92
CPSF7-224ENST00000544990 POLLQ9UGP5 575 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 HACL1Q9UJ83 578 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 TSKSQ9UJT2 592 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 SPEF2Q9C093 1822 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 XDHP47989 1333 aa9.28□□□□□ -0.92
CPSF7-224ENST00000544990 COL4A1P02462 1669 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 IPO8O15397 1037 aaKnown RBP9.27□□□□□ -0.93
CPSF7-224ENST00000544990 UFL1O94874 794 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 HSPA6P17066 643 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 ATP2B4P23634 1241 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 DNAJB2P25686 324 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
CPSF7-224ENST00000544990 FOXO4P98177 505 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 CCDC57Q2TAC2 916 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 SH3D19Q5HYK7 790 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 CIAPIN1Q6FI81 312 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 LMBR1LQ6UX01 489 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 NOB1Q9ULX3 412 aaKnown RBP9.27□□□□□ -0.93
CPSF7-224ENST00000544990 MINPP1Q9UNW1 487 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 ZBED9Q6R2W3 1325 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 KIF16BQ96L93 1317 aa9.27□□□□□ -0.93
CPSF7-224ENST00000544990 COL4A5P29400 1685 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 DUOX1Q9NRD9 1551 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 NBPF7P0C2Y1 421 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-224ENST00000544990 EPHX2P34913 555 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 CCT4P50991 539 aaKnown RBP9.26□□□□□ -0.93
CPSF7-224ENST00000544990 CXCL9Q07325 125 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 TAF7LQ5H9L4 462 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 PNMA8AQ86V59 439 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-224ENST00000544990 ARHGAP45Q92619 1136 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 ANKRD2Q9GZV1 360 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 TAF1DQ9H5J8 278 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-224ENST00000544990 FAM198AQ9UFP1 575 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 HDAC5Q9UQL6 1122 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 LEMD3Q9Y2U8 911 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 UTYO14607 1347 aa9.26□□□□□ -0.93
CPSF7-224ENST00000544990 LTBP1Q14766 1721 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 ARHGAP33O14559 1287 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 ECE2O60344 883 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 RAD17O75943 681 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 APLP1P51693 650 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 SKIV2LQ15477 1246 aaKnown RBP9.25□□□□□ -0.93
CPSF7-224ENST00000544990 EAPPQ56P03 285 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms