RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	AK5	Q9Y6K8	562 aa		7.24	□□□□□ -1.25
RAP1B-231	ENST00000544639	METTL12	A8MUP2	240 aa		7.23	□□□□□ -1.25
RAP1B-231	ENST00000544639	NID1	P14543	1247 aa		7.23	□□□□□ -1.25
RAP1B-231	ENST00000544639	PTPRA	P18433	802 aa		7.23	□□□□□ -1.25
RAP1B-231	ENST00000544639	ITGB7	P26010	798 aa		7.23	□□□□□ -1.25
RAP1B-231	ENST00000544639	GRIA4	P48058	902 aa		7.23	□□□□□ -1.25
RAP1B-231	ENST00000544639	MRPL58	Q14197	206 aa	Known RBP	7.23	□□□□□ -1.25
RAP1B-231	ENST00000544639	SRCIN1	Q9C0H9	1055 aa		7.23	□□□□□ -1.25
RAP1B-231	ENST00000544639	ADAM19	Q9H013	955 aa		7.23	□□□□□ -1.25
RAP1B-231	ENST00000544639	SEMA6B	Q9H3T3	888 aa		7.23	□□□□□ -1.25
RAP1B-231	ENST00000544639	TMEM238L	A0A1B0GVL6	79 aa		7.22	□□□□□ -1.25
RAP1B-231	ENST00000544639	EIF4B	P23588	611 aa	Known RBP	7.22	□□□□□ -1.25
RAP1B-231	ENST00000544639	TRIM28	Q13263	835 aa	Known RBP	7.22	□□□□□ -1.25
RAP1B-231	ENST00000544639	GDF6	Q6KF10	455 aa	Predicted RBP	7.22	□□□□□ -1.25
RAP1B-231	ENST00000544639	CACTIN-AS1	Q8N1I8	211 aa		7.22	□□□□□ -1.25
RAP1B-231	ENST00000544639	LACRT	Q9GZZ8	138 aa		7.22	□□□□□ -1.25
RAP1B-231	ENST00000544639		A0A096LPE4	126 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639		A0A1W2PPZ6	126 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	SORBS3	O60504	671 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	ITPKA	P23677	461 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	RBM25	P49756	843 aa	Known RBP	7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	SPRED3	Q2MJR0	410 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	ASAP3	Q8TDY4	903 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	BCL11A	Q9H165	835 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	MRS2	Q9HD23	443 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	KIAA1522	Q9P206	1035 aa	Predicted RBP	7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	FAM8A1	Q9UBU6	413 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	SOX13	Q9UN79	622 aa		7.21	□□□□□ -1.26
RAP1B-231	ENST00000544639	VAMP1	P23763	118 aa		7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	ITGAE	P38570	1179 aa		7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	FCGRT	P55899	365 aa		7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	PTPN12	Q05209	780 aa	Known RBP	7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	NKAPL	Q5M9Q1	402 aa		7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	ILDR2	Q71H61	639 aa		7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	C3orf58	Q8NDZ4	430 aa		7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	BSND	Q8WZ55	320 aa		7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	MRRF	Q96E11	262 aa	Known RBP	7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	PPP4R2	Q9NY27	417 aa		7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	VTI1B	Q9UEU0	232 aa		7.2	□□□□□ -1.26
RAP1B-231	ENST00000544639	CTSH	P09668	335 aa		7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	USP17L7	P0C7H9	530 aa		7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	XRCC5	P13010	732 aa	Known RBP	7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	EPHA1	P21709	976 aa		7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	CDC27	P30260	824 aa		7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	GSTT1	P30711	240 aa		7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	MSL1	Q68DK7	614 aa		7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	IL22RA1	Q8N6P7	574 aa		7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	MUC3B	Q9H195	1237 aa		7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	ZNF576	Q9H609	170 aa		7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.19	□□□□□ -1.26
RAP1B-231	ENST00000544639	DTHD1	Q6ZMT9	781 aa		7.18	□□□□□ -1.26
RAP1B-231	ENST00000544639	VN1R5	Q7Z5H4	357 aa		7.18	□□□□□ -1.26
RAP1B-231	ENST00000544639	WFDC8	Q8IUA0	241 aa		7.18	□□□□□ -1.26
RAP1B-231	ENST00000544639	CRELD1	Q96HD1	420 aa		7.18	□□□□□ -1.26
RAP1B-231	ENST00000544639	TPSG1	Q9NRR2	321 aa		7.18	□□□□□ -1.26
RAP1B-231	ENST00000544639	FAM177B	A6PVY3	158 aa		7.17	□□□□□ -1.26
RAP1B-231	ENST00000544639	C9orf172	C9J069	976 aa		7.17	□□□□□ -1.26
RAP1B-231	ENST00000544639	FAM229A	H3BQW9	127 aa		7.17	□□□□□ -1.26
RAP1B-231	ENST00000544639		H3BRJ5	948 aa		7.17	□□□□□ -1.26
RAP1B-231	ENST00000544639	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.17	□□□□□ -1.26
RAP1B-231	ENST00000544639	PPM1H	Q9ULR3	514 aa		7.17	□□□□□ -1.26
RAP1B-231	ENST00000544639	RECK	O95980	971 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	ELN	P15502	786 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	CABP4	P57796	275 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	PCDH1	Q08174	1060 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	ZMYM1	Q5SVZ6	1142 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	TRAPPC3L	Q5T215	181 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	LDLRAD1	Q5T700	205 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	DMRTC2	Q8IXT2	367 aa	Predicted RBP	7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	ANKRD24	Q8TF21	1146 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	ZFYVE1	Q9HBF4	777 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639	PPME1	Q9Y570	386 aa		7.16	□□□□□ -1.26
RAP1B-231	ENST00000544639		A0A0A0MRY4	1105 aa		7.15	□□□□□ -1.26
RAP1B-231	ENST00000544639	LINC01387	J3KSC0	135 aa		7.15	□□□□□ -1.26
RAP1B-231	ENST00000544639	DYRK3	O43781	588 aa		7.15	□□□□□ -1.26
RAP1B-231	ENST00000544639	ESRRA	P11474	423 aa	Predicted RBP	7.15	□□□□□ -1.26
RAP1B-231	ENST00000544639	ADGRE1	Q14246	886 aa		7.15	□□□□□ -1.26
RAP1B-231	ENST00000544639	GRIK4	Q16099	956 aa		7.15	□□□□□ -1.26
RAP1B-231	ENST00000544639	TXNDC11	Q6PKC3	985 aa		7.15	□□□□□ -1.26
RAP1B-231	ENST00000544639	AKAP2	Q9Y2D5	859 aa		7.15	□□□□□ -1.26
RAP1B-231	ENST00000544639	CDC25B	P30305	580 aa		7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	RAC1	P63000	192 aa		7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	NRG1	Q02297	640 aa	Predicted RBP	7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	FAAP100	Q0VG06	881 aa		7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	IKBKE	Q14164	716 aa		7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	SETDB1	Q15047	1291 aa		7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	ZNF423	Q2M1K9	1284 aa		7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	MEI1	Q5TIA1	1274 aa		7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	LENG1	Q96BZ8	264 aa	Predicted RBP	7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	BACH2	Q9BYV9	841 aa		7.14	□□□□□ -1.27
RAP1B-231	ENST00000544639	USP31	Q70CQ4	1352 aa		7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639	B3GALT4	O96024	378 aa		7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639	SELP	P16109	830 aa		7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639	ST13	P50502	369 aa	Known RBP	7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639	PIP4K2B	P78356	416 aa		7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639	TSNAXIP1	Q2TAA8	658 aa		7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639	FAM117B	Q6P1L5	589 aa		7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639	DTWD1	Q8N5C7	304 aa		7.13	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms