RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 B4E1Z4 1266 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 PSMA7O14818 248 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 PLS1Q14651 629 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 RRP36Q96EU6 259 aaKnown RBP14.58□□□□□ -0.08
CHD4-211ENST00000544484 ARID5AQ03989 594 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 RAB3GAP1Q15042 981 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 TNNI3KQ59H18 835 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 HOOK3Q86VS8 718 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 CGNQ9P2M7 1197 aaKnown RBP14.58□□□□□ -0.08
CHD4-211ENST00000544484 FPGT-TNNI3KV9GXZ4 949 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 KRT2P35908 639 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 PNMA6EA0A0J9YXQ4 647 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 SYT1P21579 422 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 MCM3P25205 808 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 RTL9Q8NET4 1388 aa14.58□□□□□ -0.08
CHD4-211ENST00000544484 GOLGA6L9A6NEM1 432 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 CHL1O00533 1208 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 FAM227BQ96M60 508 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 DNAI1Q9UI46 699 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 SBNO1A3KN83 1393 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 TRAPPC3LQ5T215 181 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 NAA15Q9BXJ9 866 aaKnown RBP14.57□□□□□ -0.08
CHD4-211ENST00000544484 SPDYE3A6NKU9 549 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 TAF5LO75529 589 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 ARMT1Q9H993 441 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 CALML3P27482 149 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 ANKRD2Q9GZV1 360 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 SHTN1A0MZ66 631 aa14.57□□□□□ -0.08
CHD4-211ENST00000544484 SUCLG2Q96I99 432 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 SH3TC1Q8TE82 1336 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 KRT79Q5XKE5 535 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.56□□□□□ -0.088e-10■■■■□ 22.5
CHD4-211ENST00000544484 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 XAGE2Q96GT9 111 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 CTAGE1Q96RT6 745 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 LMTK3Q96Q04 1460 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 SHANK2Q9UPX8 1470 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 ARHGEF12Q9NZN5 1544 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 PRDM1O75626 825 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 PLCG2P16885 1265 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 ZBTB21Q9ULJ3 1066 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 NCOA5Q9HCD5 579 aaKnown RBP14.56□□□□□ -0.08
CHD4-211ENST00000544484 CLEC11AQ9Y240 323 aa14.56□□□□□ -0.08
CHD4-211ENST00000544484 EDC4Q6P2E9 1401 aaKnown RBP14.56□□□□□ -0.08
CHD4-211ENST00000544484 A0A1B0GVL5 298 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 RAD50Q92878 1312 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 CNBD1Q8NA66 436 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 RGS22Q8NE09 1264 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 CCNL1Q9UK58 526 aaPredicted RBP14.55□□□□□ -0.08
CHD4-211ENST00000544484 UBE4AQ14139 1066 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 NOLC1Q14978 699 aaKnown RBP eCLIP14.55□□□□□ -0.083e-6■□□□□ 9.5
CHD4-211ENST00000544484 FAM173BQ6P4H8 233 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 SLC52A2Q9HAB3 445 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 EIF6P56537 245 aaKnown RBP14.55□□□□□ -0.08
CHD4-211ENST00000544484 SP4Q02446 784 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 SPAG1Q07617 926 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 MAATS1Q7Z4T9 603 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 TCHPQ9BT92 498 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 HELLSQ9NRZ9 838 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 DNAJC10Q8IXB1 793 aa14.55□□□□□ -0.08
CHD4-211ENST00000544484 PHACTR2O75167 634 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 UFL1O94874 794 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 CYLC1P35663 651 aaPredicted RBP14.54□□□□□ -0.08
CHD4-211ENST00000544484 ZNF174Q15697 407 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 PPP4R3BQ5MIZ7 849 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 TEX11Q8IYF3 940 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 CCDC97Q96F63 343 aaPredicted RBP14.54□□□□□ -0.08
CHD4-211ENST00000544484 SLC27A2O14975 620 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 KRT13P13646 458 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 ZBTB9Q96C00 473 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 CFAP65Q6ZU64 1925 aaKnown RBP14.54□□□□□ -0.08
CHD4-211ENST00000544484 TRAF1Q13077 416 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 ZNF496Q96IT1 587 aaPredicted RBP14.54□□□□□ -0.08
CHD4-211ENST00000544484 TAOK3Q9H2K8 898 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 JDP2Q8WYK2 163 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 TBC1D5Q92609 795 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 ABCC2Q92887 1545 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 INTS4Q96HW7 963 aaKnown RBP14.54□□□□□ -0.08
CHD4-211ENST00000544484 VWA3AA6NCI4 1184 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 AKNAD1Q5T1N1 836 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 CTR9Q6PD62 1173 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 DENND2AQ9ULE3 1009 aa14.54□□□□□ -0.08
CHD4-211ENST00000544484 RPS6KB1P23443 525 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 DTHD1Q6ZMT9 781 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 CCDC91Q7Z6B0 441 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 TRERF1Q96PN7 1200 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 CFAP43Q8NDM7 1665 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 PUM3Q15397 648 aaKnown RBP14.53□□□□□ -0.08
CHD4-211ENST00000544484 MRVI1Q9Y6F6 885 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 HIBADHP31937 336 aaKnown RBP14.53□□□□□ -0.08
CHD4-211ENST00000544484 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.53□□□□□ -0.08
CHD4-211ENST00000544484 V9GYY5 206 aaPredicted RBP14.53□□□□□ -0.08
CHD4-211ENST00000544484 LETM2Q2VYF4 491 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 OTUD7BQ6GQQ9 843 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 IFNKQ9P0W0 207 aa14.53□□□□□ -0.08
CHD4-211ENST00000544484 GOLGA6L10A0A0M3HER8 536 aa14.52□□□□□ -0.08
CHD4-211ENST00000544484 GPAA1O43292 621 aa14.52□□□□□ -0.08
CHD4-211ENST00000544484 PDE8AO60658 829 aa14.52□□□□□ -0.08
CHD4-211ENST00000544484 GNA11P29992 359 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms