RNA–Protein interactions for RNA: ENST00000544392.5

CACUL1-207, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-207ENST00000544392 NEXNQ0ZGT2 675 aa11.33□□□□□ -0.6
CACUL1-207ENST00000544392 HDAC1Q13547 482 aaPredicted RBP11.33□□□□□ -0.6
CACUL1-207ENST00000544392 MAP7D1Q3KQU3 841 aa11.33□□□□□ -0.6
CACUL1-207ENST00000544392 MEX3CQ5U5Q3 659 aaKnown RBP11.33□□□□□ -0.6
CACUL1-207ENST00000544392 USP17L2Q6R6M4 530 aa11.33□□□□□ -0.6
CACUL1-207ENST00000544392 USP17L1Q7RTZ2 530 aa11.33□□□□□ -0.6
CACUL1-207ENST00000544392 RPAP2Q8IXW5 612 aaPredicted RBP11.33□□□□□ -0.6
CACUL1-207ENST00000544392 GCC1Q96CN9 775 aa11.33□□□□□ -0.6
CACUL1-207ENST00000544392 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
CACUL1-207ENST00000544392 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
CACUL1-207ENST00000544392 ABCC4O15439 1325 aa11.33□□□□□ -0.6
CACUL1-207ENST00000544392 COL22A1Q8NFW1 1626 aaPredicted RBP11.32□□□□□ -0.6
CACUL1-207ENST00000544392 SCTRP47872 440 aa11.32□□□□□ -0.6
CACUL1-207ENST00000544392 DDB1Q16531 1140 aa11.32□□□□□ -0.6
CACUL1-207ENST00000544392 PKDCCQ504Y2 493 aa11.32□□□□□ -0.6
CACUL1-207ENST00000544392 SLC4A10Q6U841 1118 aa11.32□□□□□ -0.6
CACUL1-207ENST00000544392 IRX2Q9BZI1 471 aaPredicted RBP11.32□□□□□ -0.6
CACUL1-207ENST00000544392 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
CACUL1-207ENST00000544392 PGPEP1Q9NXJ5 209 aa11.32□□□□□ -0.6
CACUL1-207ENST00000544392 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
CACUL1-207ENST00000544392 ZBTB7BO15156 539 aaPredicted RBP11.31□□□□□ -0.6
CACUL1-207ENST00000544392 CYP27B1O15528 508 aa11.31□□□□□ -0.6
CACUL1-207ENST00000544392 RLBP1P12271 317 aa11.31□□□□□ -0.6
CACUL1-207ENST00000544392 EML3Q32P44 896 aa11.31□□□□□ -0.6
CACUL1-207ENST00000544392 CCDC125Q86Z20 511 aa11.31□□□□□ -0.6
CACUL1-207ENST00000544392 DDX21Q9NR30 783 aaKnown RBP eCLIP11.31□□□□□ -0.6
CACUL1-207ENST00000544392 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
CACUL1-207ENST00000544392 CRYBG1Q9Y4K1 1723 aa11.31□□□□□ -0.6
CACUL1-207ENST00000544392 STARD3NLO95772 234 aa11.3□□□□□ -0.6
CACUL1-207ENST00000544392 GNAI2P04899 355 aa11.3□□□□□ -0.6
CACUL1-207ENST00000544392 TIMP2P16035 220 aa11.3□□□□□ -0.6
CACUL1-207ENST00000544392 UNC5CLQ8IV45 518 aa11.3□□□□□ -0.6
CACUL1-207ENST00000544392 KLF16Q9BXK1 252 aaPredicted RBP11.3□□□□□ -0.6
CACUL1-207ENST00000544392 MEGF6O75095 1541 aa11.3□□□□□ -0.6
CACUL1-207ENST00000544392 LRRC37A3O60309 1634 aa11.29□□□□□ -0.6
CACUL1-207ENST00000544392 MYT1Q01538 1121 aa11.29□□□□□ -0.6
CACUL1-207ENST00000544392 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
CACUL1-207ENST00000544392 PLEKHM2Q8IWE5 1019 aa11.29□□□□□ -0.6
CACUL1-207ENST00000544392 SRCIN1Q9C0H9 1055 aa11.29□□□□□ -0.6
CACUL1-207ENST00000544392 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
CACUL1-207ENST00000544392 RGPD5Q99666 1765 aa11.28□□□□□ -0.6
CACUL1-207ENST00000544392 LILRA1O75019 489 aa11.28□□□□□ -0.6
CACUL1-207ENST00000544392 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
CACUL1-207ENST00000544392 ERVK-9P63128 1117 aa11.28□□□□□ -0.6
CACUL1-207ENST00000544392 CBLBQ13191 982 aa11.28□□□□□ -0.6
CACUL1-207ENST00000544392 LAPTM4AQ15012 233 aa11.28□□□□□ -0.6
CACUL1-207ENST00000544392 KRT24Q2M2I5 525 aa11.28□□□□□ -0.6
CACUL1-207ENST00000544392 KSR2Q6VAB6 950 aa11.28□□□□□ -0.6
CACUL1-207ENST00000544392 SPATA31A1Q5TZJ5 1347 aa11.28□□□□□ -0.6
CACUL1-207ENST00000544392 RGPD2P0DJD1 1756 aa11.27□□□□□ -0.61
CACUL1-207ENST00000544392 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.27□□□□□ -0.61
CACUL1-207ENST00000544392 ALDH1L1O75891 902 aa11.27□□□□□ -0.61
CACUL1-207ENST00000544392 UBTFL1P0CB47 393 aaPredicted RBP11.27□□□□□ -0.61
CACUL1-207ENST00000544392 USP4Q13107 963 aa11.27□□□□□ -0.61
CACUL1-207ENST00000544392 VPS72Q15906 364 aa11.27□□□□□ -0.61
CACUL1-207ENST00000544392 DNAAF4Q8WXU2 420 aa11.27□□□□□ -0.61
CACUL1-207ENST00000544392 C8orf37Q96NL8 207 aa11.27□□□□□ -0.61
CACUL1-207ENST00000544392 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
CACUL1-207ENST00000544392 CACNA1FO60840 1977 aa11.27□□□□□ -0.61
CACUL1-207ENST00000544392 CAPN5O15484 640 aaPredicted RBP11.26□□□□□ -0.61
CACUL1-207ENST00000544392 DGAT1O75907 488 aa11.26□□□□□ -0.61
CACUL1-207ENST00000544392 ADD1P35611 737 aaKnown RBP11.26□□□□□ -0.61
CACUL1-207ENST00000544392 HSP90AB4PQ58FF6 505 aa11.26□□□□□ -0.61
CACUL1-207ENST00000544392 SMARCC1Q92922 1105 aaPredicted RBP11.26□□□□□ -0.61
CACUL1-207ENST00000544392 UPF2Q9HAU5 1272 aaKnown RBP11.26□□□□□ -0.61
CACUL1-207ENST00000544392 C9orf78Q9NZ63 289 aaPredicted RBP11.26□□□□□ -0.61
CACUL1-207ENST00000544392 MKRN1Q9UHC7 482 aaKnown RBP11.26□□□□□ -0.61
CACUL1-207ENST00000544392 USP21Q9UK80 565 aa11.26□□□□□ -0.61
CACUL1-207ENST00000544392 NOD1Q9Y239 953 aa11.26□□□□□ -0.61
CACUL1-207ENST00000544392 COL16A1Q07092 1604 aaPredicted RBP11.26□□□□□ -0.61
CACUL1-207ENST00000544392 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
CACUL1-207ENST00000544392 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
CACUL1-207ENST00000544392 ABCA3Q99758 1704 aa11.26□□□□□ -0.61
CACUL1-207ENST00000544392 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
CACUL1-207ENST00000544392 LZTS3O60299 673 aaPredicted RBP11.25□□□□□ -0.61
CACUL1-207ENST00000544392 ZNF496Q96IT1 587 aaPredicted RBP11.25□□□□□ -0.61
CACUL1-207ENST00000544392 HEG1Q9ULI3 1381 aa11.25□□□□□ -0.61
CACUL1-207ENST00000544392 PKD1L3Q7Z443 1732 aa11.24□□□□□ -0.61
CACUL1-207ENST00000544392 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
CACUL1-207ENST00000544392 AVPP01185 164 aa11.24□□□□□ -0.61
CACUL1-207ENST00000544392 SLC39A6Q13433 755 aa11.24□□□□□ -0.61
CACUL1-207ENST00000544392 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
CACUL1-207ENST00000544392 LINS1Q8NG48 757 aa11.24□□□□□ -0.61
CACUL1-207ENST00000544392 SYTL4Q96C24 671 aaPredicted RBP11.24□□□□□ -0.61
CACUL1-207ENST00000544392 OSBPL3Q9H4L5 887 aa11.24□□□□□ -0.61
CACUL1-207ENST00000544392 KDM6AO15550 1401 aaPredicted RBP11.24□□□□□ -0.61
CACUL1-207ENST00000544392 KCNQ3O43525 872 aa11.23□□□□□ -0.61
CACUL1-207ENST00000544392 IGHDP01880 384 aa11.23□□□□□ -0.61
CACUL1-207ENST00000544392 KIF6Q6ZMV9 814 aa11.23□□□□□ -0.61
CACUL1-207ENST00000544392 SMC5Q8IY18 1101 aa11.23□□□□□ -0.61
CACUL1-207ENST00000544392 ANKRD44Q8N8A2 993 aa11.23□□□□□ -0.61
CACUL1-207ENST00000544392 VRTNQ9H8Y1 702 aa11.23□□□□□ -0.61
CACUL1-207ENST00000544392 MRC1P22897 1456 aa11.23□□□□□ -0.61
CACUL1-207ENST00000544392 HSP90B1P14625 803 aaKnown RBP11.22□□□□□ -0.61
CACUL1-207ENST00000544392 MYL6BP14649 208 aa11.22□□□□□ -0.61
CACUL1-207ENST00000544392 RGS3P49796 1198 aa11.22□□□□□ -0.61
CACUL1-207ENST00000544392 GTF2IP78347 998 aa11.22□□□□□ -0.61
CACUL1-207ENST00000544392 G2E3Q7L622 706 aa11.22□□□□□ -0.61
CACUL1-207ENST00000544392 AGBL1Q96MI9 1066 aa11.22□□□□□ -0.61
CACUL1-207ENST00000544392 SCN11AQ9UI33 1791 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms