RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 TAF5LO75529 589 aa25.47■■□□□ 1.67
LPCAT3-211ENST00000543794 FKBP5Q13451 457 aaPredicted RBP25.47■■□□□ 1.67
LPCAT3-211ENST00000543794 PPP2R3BQ9Y5P8 575 aa25.47■■□□□ 1.67
LPCAT3-211ENST00000543794 UNCXA6NJT0 531 aa25.46■■□□□ 1.67
LPCAT3-211ENST00000543794 ZBTB48P10074 688 aaPredicted RBP25.46■■□□□ 1.67
LPCAT3-211ENST00000543794 IL1R1P14778 569 aa25.46■■□□□ 1.67
LPCAT3-211ENST00000543794 IFNL1Q8IU54 200 aa25.46■■□□□ 1.67
LPCAT3-211ENST00000543794 PCDHAC2Q9Y5I4 1007 aa25.46■■□□□ 1.67
LPCAT3-211ENST00000543794 FKBP1AP62942 108 aaKnown RBP25.45■■□□□ 1.66
LPCAT3-211ENST00000543794 HELBQ8NG08 1087 aaPredicted RBP25.45■■□□□ 1.66
LPCAT3-211ENST00000543794 FOXO4P98177 505 aa25.44■■□□□ 1.66
LPCAT3-211ENST00000543794 IFIT5Q13325 482 aaKnown RBP25.44■■□□□ 1.66
LPCAT3-211ENST00000543794 SUPT20HL1Q3ZLR7 823 aa25.44■■□□□ 1.66
LPCAT3-211ENST00000543794 CCDC184Q52MB2 194 aa25.44■■□□□ 1.66
LPCAT3-211ENST00000543794 NCBP3Q53F19 620 aaKnown RBP25.44■■□□□ 1.66
LPCAT3-211ENST00000543794 WNK4Q96J92 1243 aa25.44■■□□□ 1.66
LPCAT3-211ENST00000543794 CLMNQ96JQ2 1002 aa25.44■■□□□ 1.66
LPCAT3-211ENST00000543794 PRMT6Q96LA8 375 aaPredicted RBP25.44■■□□□ 1.66
LPCAT3-211ENST00000543794 SPDYE2BA6NHP3 402 aa25.43■■□□□ 1.66
LPCAT3-211ENST00000543794 MYO1BO43795 1136 aa25.43■■□□□ 1.66
LPCAT3-211ENST00000543794 SPDYE6P0CI01 402 aa25.43■■□□□ 1.66
LPCAT3-211ENST00000543794 CFAP100Q494V2 611 aa25.43■■□□□ 1.66
LPCAT3-211ENST00000543794 ZNF804AQ7Z570 1209 aa25.43■■□□□ 1.66
LPCAT3-211ENST00000543794 F8W031 263 aaPredicted RBP25.42■■□□□ 1.66
LPCAT3-211ENST00000543794 VAMP4O75379 141 aa25.42■■□□□ 1.66
LPCAT3-211ENST00000543794 TRIM17Q9Y577 477 aa25.42■■□□□ 1.66
LPCAT3-211ENST00000543794 SSC5DA1L4H1 1573 aa25.41■■□□□ 1.66
LPCAT3-211ENST00000543794 CLRN2A0PK11 232 aa25.41■■□□□ 1.66
LPCAT3-211ENST00000543794 IGF2BP3O00425 579 aaKnown RBP eCLIP25.41■■□□□ 1.66
LPCAT3-211ENST00000543794 NBPF12Q5TAG4 269 aaPredicted RBP25.41■■□□□ 1.66
LPCAT3-211ENST00000543794 USP2O75604 605 aaPredicted RBP25.4■■□□□ 1.66
LPCAT3-211ENST00000543794 OTOP1Q7RTM1 612 aa25.4■■□□□ 1.66
LPCAT3-211ENST00000543794 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.4■■□□□ 1.66
LPCAT3-211ENST00000543794 BEND3Q5T5X7 828 aa25.39■■□□□ 1.66
LPCAT3-211ENST00000543794 VEZTQ9HBM0 779 aa25.39■■□□□ 1.66
LPCAT3-211ENST00000543794 CHMP3Q9Y3E7 222 aa25.39■■□□□ 1.66
LPCAT3-211ENST00000543794 HTTP42858 3142 aa25.39■■□□□ 1.65
LPCAT3-211ENST00000543794 AOX1Q06278 1338 aa25.38■■□□□ 1.65
LPCAT3-211ENST00000543794 FANCIQ9NVI1 1328 aa25.38■■□□□ 1.65
LPCAT3-211ENST00000543794 IREB2P48200 963 aaKnown RBP25.38■■□□□ 1.65
LPCAT3-211ENST00000543794 RASA3Q14644 834 aa25.38■■□□□ 1.65
LPCAT3-211ENST00000543794 INTS3Q68E01 1043 aaKnown RBP25.38■■□□□ 1.65
LPCAT3-211ENST00000543794 LMBR1LQ6UX01 489 aa25.38■■□□□ 1.65
LPCAT3-211ENST00000543794 MKI67P46013 3256 aaKnown RBP25.37■■□□□ 1.65
LPCAT3-211ENST00000543794 GJA5P36382 358 aa25.37■■□□□ 1.65
LPCAT3-211ENST00000543794 OTUD7BQ6GQQ9 843 aa25.37■■□□□ 1.65
LPCAT3-211ENST00000543794 JAG2Q9Y219 1238 aa25.37■■□□□ 1.65
LPCAT3-211ENST00000543794 TESPA1A2RU30 521 aaPredicted RBP25.36■■□□□ 1.65
LPCAT3-211ENST00000543794 F6X3S4 739 aa25.36■■□□□ 1.65
LPCAT3-211ENST00000543794 RBM5P52756 815 aaKnown RBP eCLIP25.36■■□□□ 1.65
LPCAT3-211ENST00000543794 CCDC57Q2TAC2 916 aa25.36■■□□□ 1.65
LPCAT3-211ENST00000543794 EPHA10Q5JZY3 1008 aa25.36■■□□□ 1.65
LPCAT3-211ENST00000543794 LDHAL6AQ6ZMR3 332 aa25.36■■□□□ 1.65
LPCAT3-211ENST00000543794 ANKRD13AQ8IZ07 590 aa25.36■■□□□ 1.65
LPCAT3-211ENST00000543794 ZNF594Q96JF6 807 aaPredicted RBP25.36■■□□□ 1.65
LPCAT3-211ENST00000543794 FAM205AQ6ZU69 1335 aa25.36■■□□□ 1.65
LPCAT3-211ENST00000543794 ERO1AQ96HE7 468 aa25.35■■□□□ 1.65
LPCAT3-211ENST00000543794 PTPN18Q99952 460 aa25.35■■□□□ 1.65
LPCAT3-211ENST00000543794 PTPN22Q9Y2R2 807 aa25.35■■□□□ 1.65
LPCAT3-211ENST00000543794 PLIN1O60240 522 aa25.34■■□□□ 1.65
LPCAT3-211ENST00000543794 CRHR2Q13324 411 aa25.34■■□□□ 1.65
LPCAT3-211ENST00000543794 WDR63Q8IWG1 891 aa25.34■■□□□ 1.65
LPCAT3-211ENST00000543794 TDRD7Q8NHU6 1098 aaKnown RBP25.34■■□□□ 1.65
LPCAT3-211ENST00000543794 CNNM1Q9NRU3 951 aa25.34■■□□□ 1.65
LPCAT3-211ENST00000543794 CENPFP49454 3210 aa25.33■■□□□ 1.65
LPCAT3-211ENST00000543794 POTEFA5A3E0 1075 aa25.33■■□□□ 1.65
LPCAT3-211ENST00000543794 EXOSC9Q06265 439 aaKnown RBP25.33■■□□□ 1.65
LPCAT3-211ENST00000543794 SPDYE2Q495Y8 402 aa25.33■■□□□ 1.65
LPCAT3-211ENST00000543794 GRM8O00222 908 aa25.32■■□□□ 1.64
LPCAT3-211ENST00000543794 TNFAIP1Q13829 316 aa25.32■■□□□ 1.64
LPCAT3-211ENST00000543794 TAF7LQ5H9L4 462 aa25.32■■□□□ 1.64
LPCAT3-211ENST00000543794 CD99L2Q8TCZ2 262 aa25.32■■□□□ 1.64
LPCAT3-211ENST00000543794 GCC1Q96CN9 775 aa25.32■■□□□ 1.64
LPCAT3-211ENST00000543794 ZNF70Q9UC06 446 aaPredicted RBP25.32■■□□□ 1.64
LPCAT3-211ENST00000543794 SERPINA10Q9UK55 444 aa25.32■■□□□ 1.64
LPCAT3-211ENST00000543794 SP3Q02447 781 aa25.31■■□□□ 1.64
LPCAT3-211ENST00000543794 UBE4AQ14139 1066 aa25.31■■□□□ 1.64
LPCAT3-211ENST00000543794 MFSD14BQ5SR56 506 aa25.31■■□□□ 1.64
LPCAT3-211ENST00000543794 EFCC1Q9HA90 598 aa25.31■■□□□ 1.64
LPCAT3-211ENST00000543794 TTF2Q9UNY4 1162 aaKnown RBP25.31■■□□□ 1.64
LPCAT3-211ENST00000543794 HIBADHP31937 336 aaKnown RBP25.3■■□□□ 1.64
LPCAT3-211ENST00000543794 ARMC5Q96C12 935 aa25.3■■□□□ 1.64
LPCAT3-211ENST00000543794 OPTNQ96CV9 577 aa25.3■■□□□ 1.64
LPCAT3-211ENST00000543794 MS4A4AQ96JQ5 239 aa25.3■■□□□ 1.64
LPCAT3-211ENST00000543794 FAM84BQ96KN1 310 aaPredicted RBP25.3■■□□□ 1.64
LPCAT3-211ENST00000543794 TDRD3Q9H7E2 651 aaKnown RBP25.3■■□□□ 1.64
LPCAT3-211ENST00000543794 CACNA1FO60840 1977 aa25.29■■□□□ 1.64
LPCAT3-211ENST00000543794 DZIP1LQ8IYY4 767 aaKnown RBP25.29■■□□□ 1.64
LPCAT3-211ENST00000543794 TEPSINQ96N21 525 aa25.29■■□□□ 1.64
LPCAT3-211ENST00000543794 ELP3Q9H9T3 547 aa25.29■■□□□ 1.64
LPCAT3-211ENST00000543794 GYG1P46976 350 aa25.28■■□□□ 1.64
LPCAT3-211ENST00000543794 CAP1Q01518 475 aa25.28■■□□□ 1.64
LPCAT3-211ENST00000543794 C9orf78Q9NZ63 289 aaPredicted RBP25.28■■□□□ 1.64
LPCAT3-211ENST00000543794 SALL2Q9Y467 1007 aaPredicted RBP25.28■■□□□ 1.64
LPCAT3-211ENST00000543794 ECM29Q5VYK3 1845 aa25.28■■□□□ 1.64
LPCAT3-211ENST00000543794 BRCA2P51587 3418 aa25.27■■□□□ 1.64
LPCAT3-211ENST00000543794 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.27■■□□□ 1.64
LPCAT3-211ENST00000543794 LAMB1P07942 1786 aa25.26■■□□□ 1.63
LPCAT3-211ENST00000543794 ALDH1L1O75891 902 aa25.26■■□□□ 1.63
LPCAT3-211ENST00000543794 CDAN1Q8IWY9 1227 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms