RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 FOSBP53539 338 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 VSTM4Q8IW00 320 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 IL17REQ8NFR9 667 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 KCNG4Q8TDN1 519 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 HNRNPLLQ8WVV9 542 aaKnown RBP11.23□□□□□ -0.61
TCF4-208ENST00000543082 FMNL2Q96PY5 1086 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 PA2G4Q9UQ80 394 aaKnown RBP11.23□□□□□ -0.61
TCF4-208ENST00000543082 SLIT1O75093 1534 aa11.22□□□□□ -0.61
TCF4-208ENST00000543082 TOP1P11387 765 aaKnown RBP11.22□□□□□ -0.61
TCF4-208ENST00000543082 UBASH3AP57075 661 aa11.22□□□□□ -0.61
TCF4-208ENST00000543082 GNG11P61952 73 aa11.22□□□□□ -0.61
TCF4-208ENST00000543082 G3BP1Q13283 466 aaKnown RBP eCLIP11.22□□□□□ -0.61
TCF4-208ENST00000543082 TEX2Q8IWB9 1127 aa11.22□□□□□ -0.61
TCF4-208ENST00000543082 EAF2Q96CJ1 260 aaPredicted RBP11.22□□□□□ -0.61
TCF4-208ENST00000543082 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
TCF4-208ENST00000543082 MKRN1Q9UHC7 482 aaKnown RBP11.22□□□□□ -0.61
TCF4-208ENST00000543082 DIP2AQ14689 1571 aa11.22□□□□□ -0.61
TCF4-208ENST00000543082 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
TCF4-208ENST00000543082 YEATS4O95619 227 aa11.21□□□□□ -0.61
TCF4-208ENST00000543082 SERPINC1P01008 464 aa11.21□□□□□ -0.61
TCF4-208ENST00000543082 GYS2P54840 703 aa11.21□□□□□ -0.61
TCF4-208ENST00000543082 APOBRQ0VD83 1088 aa11.21□□□□□ -0.61
TCF4-208ENST00000543082 STK38Q15208 465 aa11.21□□□□□ -0.61
TCF4-208ENST00000543082 SF3A1Q15459 793 aaKnown RBP11.21□□□□□ -0.61
TCF4-208ENST00000543082 BOLA2Q9H3K6 86 aa11.21□□□□□ -0.61
TCF4-208ENST00000543082 C9orf78Q9NZ63 289 aaPredicted RBP11.21□□□□□ -0.61
TCF4-208ENST00000543082 CHPF2Q9P2E5 772 aa11.21□□□□□ -0.61
TCF4-208ENST00000543082 NWD1Q149M9 1564 aa11.21□□□□□ -0.61
TCF4-208ENST00000543082 SOX12O15370 315 aa11.21□□□□□ -0.62
TCF4-208ENST00000543082 ERLIN1O75477 346 aa11.21□□□□□ -0.62
TCF4-208ENST00000543082 CTDNEP1O95476 244 aa11.21□□□□□ -0.62
TCF4-208ENST00000543082 GUCY2CP25092 1073 aa11.21□□□□□ -0.62
TCF4-208ENST00000543082 MYL5Q02045 173 aa11.21□□□□□ -0.62
TCF4-208ENST00000543082 HDXQ7Z353 690 aa11.21□□□□□ -0.62
TCF4-208ENST00000543082 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.62
TCF4-208ENST00000543082 PPM1EQ8WY54 764 aa11.21□□□□□ -0.62
TCF4-208ENST00000543082 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.62
TCF4-208ENST00000543082 SIL1Q9H173 461 aa11.21□□□□□ -0.62
TCF4-208ENST00000543082 VPS18Q9P253 973 aa11.21□□□□□ -0.62
TCF4-208ENST00000543082 BIN1O00499 593 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 SASH1O94885 1247 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 EIF2S2P20042 333 aaKnown RBP11.2□□□□□ -0.62
TCF4-208ENST00000543082 AMPHP49418 695 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 CFAP100Q494V2 611 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 TMEM139Q8IV31 216 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 LINC00301Q8NCQ3 95 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 KIFC2Q96AC6 838 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 WDR24Q96S15 920 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 JRKLQ9Y4A0 524 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 USP54Q70EL1 1684 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 ATP1A3P13637 1013 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 USP5P45974 858 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 TUBB4BP68371 445 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 FAM177A1Q8N128 213 aaPredicted RBP11.2□□□□□ -0.62
TCF4-208ENST00000543082 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
TCF4-208ENST00000543082 HSD3B7Q9H2F3 369 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 TLR7Q9NYK1 1049 aaKnown RBP11.2□□□□□ -0.62
TCF4-208ENST00000543082 COL15A1P39059 1388 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 CARMIL3Q8ND23 1372 aa11.2□□□□□ -0.62
TCF4-208ENST00000543082 STX10O60499 249 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 CYP21A2P08686 494 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
TCF4-208ENST00000543082 DHX32Q7L7V1 743 aaKnown RBP11.19□□□□□ -0.62
TCF4-208ENST00000543082 DHX58Q96C10 678 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 MYCBPQ99417 103 aaPredicted RBP11.19□□□□□ -0.62
TCF4-208ENST00000543082 BAG1Q99933 345 aaPredicted RBP11.19□□□□□ -0.62
TCF4-208ENST00000543082 PDE11AQ9HCR9 933 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 SPTLC2O15270 562 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 ZNF202O95125 648 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 HDGFP51858 240 aaKnown RBP11.19□□□□□ -0.62
TCF4-208ENST00000543082 CHMP4BP1P59074 171 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 EIF4A1P60842 406 aaKnown RBP11.19□□□□□ -0.62
TCF4-208ENST00000543082 SRGAP1Q7Z6B7 1085 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 DPF2Q92785 391 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 NCAPGQ9BPX3 1015 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 ZNF609O15014 1411 aa11.19□□□□□ -0.62
TCF4-208ENST00000543082 PIK3C2AO00443 1686 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 EIF3CLB5ME19 914 aaKnown RBP11.18□□□□□ -0.62
TCF4-208ENST00000543082 CHRM1P11229 460 aaPredicted RBP11.18□□□□□ -0.62
TCF4-208ENST00000543082 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
TCF4-208ENST00000543082 CORO7P57737 925 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 GUCY1B3Q02153 619 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 BEND6Q5SZJ8 279 aaPredicted RBP11.18□□□□□ -0.62
TCF4-208ENST00000543082 PACS2Q86VP3 889 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 CEP112Q8N8E3 955 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 MSANTD4Q8NCY6 345 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 ZBTB9Q96C00 473 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 EIF3CQ99613 913 aaKnown RBP11.18□□□□□ -0.62
TCF4-208ENST00000543082 LRRC2Q9BYS8 371 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 ACBD3Q9H3P7 528 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 TUBE1Q9UJT0 475 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 RAB21Q9UL25 225 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 TUBB2AQ13885 445 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 BRAPQ7Z569 592 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 FAM71BQ8TC56 605 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 CCDC12Q8WUD4 166 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms