RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 MDFIQ99750 246 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 SPON2Q9BUD6 331 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 SEMA6BQ9H3T3 888 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 ZFYVE28Q9HCC9 887 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 NPHS2Q9NP85 383 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 KBTBD4Q9NVX7 518 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 ADARB2-AS1A8MUL3 147 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 PHACTR2O75167 634 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 ITGB7P26010 798 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 PRRT3Q5FWE3 981 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 RNF187Q5TA31 235 aaPredicted RBP5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 NXPE4Q6UWF7 544 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 XKR5Q6UX68 686 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 LRRC69Q6ZNQ3 347 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 KIAA0825Q8IV33 1275 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 MKL1Q969V6 931 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 BCO2Q9BYV7 579 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 ZNF408Q9H9D4 720 aa5.57□□□□□ -1.52
SFSWAP-211ENST00000542813 ENPP3O14638 875 aa5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 GADD45BO75293 160 aaPredicted RBP5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 NASPP49321 788 aaPredicted RBP5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 IDH3AP50213 366 aa5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 ANAPC15P60006 121 aa5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 PDE12Q6L8Q7 609 aaKnown RBP5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 ZCRB1Q8TBF4 217 aaKnown RBP5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 TNFRSF25Q93038 417 aa5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 NOC4LQ9BVI4 516 aaKnown RBP5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 BRINP2Q9C0B6 783 aa5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 TTF2Q9UNY4 1162 aaKnown RBP5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 FNDC3AQ9Y2H6 1198 aaKnown RBP5.56□□□□□ -1.52
SFSWAP-211ENST00000542813 APBA3O96018 575 aa5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 POLR3DP05423 398 aaPredicted RBP5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 NEUROD1Q13562 356 aa5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 PWP1Q13610 501 aa5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 IER5Q5VY09 327 aa5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 C7orf43Q8WVR3 580 aa5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 SUSD3Q96L08 255 aa5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 SRPK1Q96SB4 655 aaKnown RBP5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 TRIM55Q9BYV6 548 aa5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 METTL14Q9HCE5 456 aaKnown RBP5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 PRDM6Q9NQX0 595 aa5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 SIRPGQ9P1W8 387 aa5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 NOP58Q9Y2X3 529 aaKnown RBP5.55□□□□□ -1.52
SFSWAP-211ENST00000542813 UBAP1LF5GYI3 381 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 M0R082 166 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 U2SURPO15042 1029 aaKnown RBP5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 GSTT1P30711 240 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 ARSDP51689 593 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 SFSWAPQ12872 951 aaKnown RBP5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 GRM2Q14416 872 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 TRIP4Q15650 581 aaPredicted RBP5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 ANKS3Q6ZW76 656 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 GALNT12Q8IXK2 581 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 ZNF417Q8TAU3 575 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 ZNF587Q96SQ5 575 aaPredicted RBP5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 SLC30A3Q99726 388 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 RSRP1Q9BUV0 290 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 ELP3Q9H9T3 547 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 TMEM63CQ9P1W3 806 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 ADAMTS1Q9UHI8 967 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 STRIP2Q9ULQ0 834 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 USP20Q9Y2K6 914 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 COL4A3BPQ9Y5P4 624 aa5.54□□□□□ -1.52
SFSWAP-211ENST00000542813 ARID4BQ4LE39 1312 aaPredicted RBP5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 ETFBP38117 255 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 SPEM2Q0P670 501 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 COL9A3Q14050 684 aaPredicted RBP5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 RSPO4Q2I0M5 234 aaPredicted RBP5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 ZMYM1Q5SVZ6 1142 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 FILIP1Q7Z7B0 1213 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 RELL1Q8IUW5 271 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 CMTR1Q8N1G2 835 aaKnown RBP5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 ZNF280CQ8ND82 737 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 HSH2DQ96JZ2 352 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 NACC1Q96RE7 527 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 CHRDQ9H2X0 955 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 ANKIB1Q9P2G1 1089 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 KLHL42Q9P2K6 505 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 EFR3BQ9Y2G0 817 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 RTCBQ9Y3I0 505 aaKnown RBP5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 MRVI1Q9Y6F6 885 aa5.53□□□□□ -1.52
SFSWAP-211ENST00000542813 MINDY4BA8MYZ0 360 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 F6X3S4 739 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 ALBP02768 609 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 INPP5BP32019 993 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 GBP2P32456 591 aaPredicted RBP5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 EIF4A3P38919 411 aaKnown RBP5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 ADH7P40394 386 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 TRIM28Q13263 835 aaKnown RBP5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 RAB33AQ14088 237 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 CCDC85BQ15834 202 aaPredicted RBP5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 NKAPLQ5M9Q1 402 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 MICALL1Q8N3F8 863 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 EAF1Q96JC9 268 aaPredicted RBP5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 RNPC3Q96LT9 517 aaKnown RBP5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 DEPDC7Q96QD5 511 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 BRD7Q9NPI1 651 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 TPSG1Q9NRR2 321 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 GINM1Q9NU53 330 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms