RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 DHX15O43143 795 aaKnown RBP9.19□□□□□ -0.94
XRCC4-206ENST00000542685 PDE4CQ08493 712 aa9.19□□□□□ -0.94
XRCC4-206ENST00000542685 TXNDC2Q86VQ3 553 aa9.19□□□□□ -0.94
XRCC4-206ENST00000542685 BHLHE41Q9C0J9 482 aaPredicted RBP9.19□□□□□ -0.94
XRCC4-206ENST00000542685 RAXQ9Y2V3 346 aa9.19□□□□□ -0.94
XRCC4-206ENST00000542685 METTL12A8MUP2 240 aa9.18□□□□□ -0.94
XRCC4-206ENST00000542685 FSTP19883 344 aa9.18□□□□□ -0.94
XRCC4-206ENST00000542685 ARTNQ5T4W7 220 aa9.18□□□□□ -0.94
XRCC4-206ENST00000542685 ARMC10Q8N2F6 343 aa9.18□□□□□ -0.94
XRCC4-206ENST00000542685 UTP4Q969X6 686 aaKnown RBP9.18□□□□□ -0.94
XRCC4-206ENST00000542685 ZFP64Q9NPA5 681 aa9.18□□□□□ -0.94
XRCC4-206ENST00000542685 STOML1Q9UBI4 398 aa9.18□□□□□ -0.94
XRCC4-206ENST00000542685 USPL1Q5W0Q7 1092 aa9.17□□□□□ -0.94
XRCC4-206ENST00000542685 CCER1Q8TC90 406 aaPredicted RBP9.17□□□□□ -0.94
XRCC4-206ENST00000542685 TMC1Q8TDI8 760 aa9.17□□□□□ -0.94
XRCC4-206ENST00000542685 RUSC1Q9BVN2 902 aa9.17□□□□□ -0.94
XRCC4-206ENST00000542685 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
XRCC4-206ENST00000542685 PDE3BQ13370 1112 aa9.16□□□□□ -0.94
XRCC4-206ENST00000542685 FAM46AQ96IP4 442 aaKnown RBP9.16□□□□□ -0.94
XRCC4-206ENST00000542685 USP26Q9BXU7 913 aa9.16□□□□□ -0.94
XRCC4-206ENST00000542685 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
XRCC4-206ENST00000542685 A0A1W2PP55 124 aa9.15□□□□□ -0.94
XRCC4-206ENST00000542685 NEFLP07196 543 aa9.15□□□□□ -0.94
XRCC4-206ENST00000542685 ORC1Q13415 861 aa9.15□□□□□ -0.94
XRCC4-206ENST00000542685 UVSSAQ2YD98 709 aa9.15□□□□□ -0.94
XRCC4-206ENST00000542685 GALNT12Q8IXK2 581 aa9.15□□□□□ -0.94
XRCC4-206ENST00000542685 LIN7BQ9HAP6 207 aa9.15□□□□□ -0.94
XRCC4-206ENST00000542685 ESRRAP11474 423 aaPredicted RBP9.14□□□□□ -0.95
XRCC4-206ENST00000542685 GSTM4Q03013 218 aa9.14□□□□□ -0.95
XRCC4-206ENST00000542685 LRP8Q14114 963 aa9.14□□□□□ -0.95
XRCC4-206ENST00000542685 ANKRD34AQ69YU3 496 aa9.14□□□□□ -0.95
XRCC4-206ENST00000542685 FDX2Q6P4F2 183 aa9.14□□□□□ -0.95
XRCC4-206ENST00000542685 MYRFLQ96LU7 910 aa9.14□□□□□ -0.95
XRCC4-206ENST00000542685 RNF112Q9ULX5 631 aa9.14□□□□□ -0.95
XRCC4-206ENST00000542685 A0A096LPE4 126 aa9.13□□□□□ -0.95
XRCC4-206ENST00000542685 A0A1W2PPZ6 126 aa9.13□□□□□ -0.95
XRCC4-206ENST00000542685 HYAL3O43820 417 aaPredicted RBP9.13□□□□□ -0.95
XRCC4-206ENST00000542685 GRIA4P48058 902 aa9.13□□□□□ -0.95
XRCC4-206ENST00000542685 PREPP48147 710 aa9.13□□□□□ -0.95
XRCC4-206ENST00000542685 SPRED3Q2MJR0 410 aa9.13□□□□□ -0.95
XRCC4-206ENST00000542685 CCNJLQ8IV13 435 aa9.13□□□□□ -0.95
XRCC4-206ENST00000542685 FAM129BQ96TA1 746 aa9.13□□□□□ -0.95
XRCC4-206ENST00000542685 TCF12Q99081 682 aa9.13□□□□□ -0.95
XRCC4-206ENST00000542685 CPNE3O75131 537 aaKnown RBP9.12□□□□□ -0.95
XRCC4-206ENST00000542685 BMP3P12645 472 aa9.12□□□□□ -0.95
XRCC4-206ENST00000542685 NBPF11Q86T75 865 aa9.12□□□□□ -0.95
XRCC4-206ENST00000542685 SLC51AQ86UW1 340 aa9.12□□□□□ -0.95
XRCC4-206ENST00000542685 TRIM42Q8IWZ5 723 aa9.12□□□□□ -0.95
XRCC4-206ENST00000542685 CITED4Q96RK1 184 aa9.12□□□□□ -0.95
XRCC4-206ENST00000542685 KCNF1Q9H3M0 494 aa9.12□□□□□ -0.95
XRCC4-206ENST00000542685 SOX17Q9H6I2 414 aaPredicted RBP9.12□□□□□ -0.95
XRCC4-206ENST00000542685 C7orf69Q9H7B7 122 aa9.12□□□□□ -0.95
XRCC4-206ENST00000542685 LOC100289279A0A1B0GTE1 492 aa9.11□□□□□ -0.95
XRCC4-206ENST00000542685 HMX2A2RU54 273 aa9.11□□□□□ -0.95
XRCC4-206ENST00000542685 IGLV1-40P01703 118 aa9.11□□□□□ -0.95
XRCC4-206ENST00000542685 PCDH1Q08174 1060 aa9.11□□□□□ -0.95
XRCC4-206ENST00000542685 NUTM2GQ5VZR2 741 aa9.11□□□□□ -0.95
XRCC4-206ENST00000542685 NIF3L1Q9GZT8 377 aa9.11□□□□□ -0.95
XRCC4-206ENST00000542685 EHD4Q9H223 541 aa9.11□□□□□ -0.95
XRCC4-206ENST00000542685 NPHS2Q9NP85 383 aa9.11□□□□□ -0.95
XRCC4-206ENST00000542685 MEGF11A6BM72 1044 aa9.1□□□□□ -0.95
XRCC4-206ENST00000542685 GPR182O15218 404 aa9.1□□□□□ -0.95
XRCC4-206ENST00000542685 GSC2O15499 205 aa9.1□□□□□ -0.95
XRCC4-206ENST00000542685 GAS2O43903 313 aaKnown RBP9.1□□□□□ -0.95
XRCC4-206ENST00000542685 DLGAP3O95886 979 aa9.1□□□□□ -0.95
XRCC4-206ENST00000542685 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.1□□□□□ -0.95
XRCC4-206ENST00000542685 FAM20CQ8IXL6 584 aa9.1□□□□□ -0.95
XRCC4-206ENST00000542685 C12orf50Q8NA57 414 aaPredicted RBP9.1□□□□□ -0.95
XRCC4-206ENST00000542685 CLEC4MQ9H2X3 399 aaPredicted RBP9.1□□□□□ -0.95
XRCC4-206ENST00000542685 SOWAHDA6NJG2 315 aa9.09□□□□□ -0.95
XRCC4-206ENST00000542685 EIF1AYO14602 144 aaKnown RBP9.09□□□□□ -0.95
XRCC4-206ENST00000542685 ZNF423Q2M1K9 1284 aa9.09□□□□□ -0.95
XRCC4-206ENST00000542685 KIAA0319Q5VV43 1072 aa9.09□□□□□ -0.95
XRCC4-206ENST00000542685 BEND4Q6ZU67 534 aa9.09□□□□□ -0.95
XRCC4-206ENST00000542685 TMPRSS13Q9BYE2 586 aa9.09□□□□□ -0.95
XRCC4-206ENST00000542685 BIN2Q9UBW5 565 aaPredicted RBP9.09□□□□□ -0.95
XRCC4-206ENST00000542685 NFIAQ12857 509 aa9.08□□□□□ -0.96
XRCC4-206ENST00000542685 CLEC10AQ8IUN9 316 aa9.08□□□□□ -0.96
XRCC4-206ENST00000542685 CYP4F12Q9HCS2 524 aa9.08□□□□□ -0.96
XRCC4-206ENST00000542685 IGHA2P01877 340 aa9.07□□□□□ -0.96
XRCC4-206ENST00000542685 SSTR4P31391 388 aa9.07□□□□□ -0.96
XRCC4-206ENST00000542685 CCDC74AQ96AQ1 378 aa9.07□□□□□ -0.96
XRCC4-206ENST00000542685 FAM83CQ9BQN1 747 aa9.07□□□□□ -0.96
XRCC4-206ENST00000542685 GADD45BO75293 160 aaPredicted RBP9.06□□□□□ -0.96
XRCC4-206ENST00000542685 TGFB1P01137 390 aa9.06□□□□□ -0.96
XRCC4-206ENST00000542685 DRD2P14416 443 aa9.06□□□□□ -0.96
XRCC4-206ENST00000542685 EXOSC6Q5RKV6 272 aaKnown RBP9.06□□□□□ -0.96
XRCC4-206ENST00000542685 RNF43Q68DV7 783 aa9.06□□□□□ -0.96
XRCC4-206ENST00000542685 DMRTB1Q96MA1 342 aa9.06□□□□□ -0.96
XRCC4-206ENST00000542685 DNAJC25Q9H1X3 360 aa9.06□□□□□ -0.96
XRCC4-206ENST00000542685 PCMTD2Q9NV79 361 aa9.06□□□□□ -0.96
XRCC4-206ENST00000542685 HIF3AQ9Y2N7 669 aa9.06□□□□□ -0.96
XRCC4-206ENST00000542685 BRD1O95696 1058 aa9.05□□□□□ -0.96
XRCC4-206ENST00000542685 MAOBP27338 520 aa9.05□□□□□ -0.96
XRCC4-206ENST00000542685 RXRBP28702 533 aa9.05□□□□□ -0.96
XRCC4-206ENST00000542685 SGO2Q562F6 1265 aa9.05□□□□□ -0.96
XRCC4-206ENST00000542685 SMG8Q8ND04 991 aaKnown RBP9.05□□□□□ -0.96
XRCC4-206ENST00000542685 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
XRCC4-206ENST00000542685 RBCK1Q9BYM8 510 aa9.05□□□□□ -0.96
XRCC4-206ENST00000542685 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms