RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 MFSD14AQ96MC6 490 aa9.84□□□□□ -0.83
SRGAP1-204ENST00000542381 SOX1O00570 391 aaPredicted RBP9.83□□□□□ -0.84
SRGAP1-204ENST00000542381 WNT11O96014 354 aa9.83□□□□□ -0.84
SRGAP1-204ENST00000542381 SGO2Q562F6 1265 aa9.83□□□□□ -0.84
SRGAP1-204ENST00000542381 TMEM102Q8N9M5 508 aaPredicted RBP9.83□□□□□ -0.84
SRGAP1-204ENST00000542381 NXPE3Q969Y0 559 aa9.83□□□□□ -0.84
SRGAP1-204ENST00000542381 HIF3AQ9Y2N7 669 aa9.83□□□□□ -0.84
SRGAP1-204ENST00000542381 MEGF11A6BM72 1044 aa9.82□□□□□ -0.84
SRGAP1-204ENST00000542381 PCSK2P16519 638 aa9.82□□□□□ -0.84
SRGAP1-204ENST00000542381 EIF1AXP47813 144 aaKnown RBP9.82□□□□□ -0.84
SRGAP1-204ENST00000542381 OSMRQ99650 979 aa9.82□□□□□ -0.84
SRGAP1-204ENST00000542381 ZKSCAN3Q9BRR0 538 aa9.82□□□□□ -0.84
SRGAP1-204ENST00000542381 GTF3C3Q9Y5Q9 886 aa9.82□□□□□ -0.84
SRGAP1-204ENST00000542381 GAS2O43903 313 aaKnown RBP9.81□□□□□ -0.84
SRGAP1-204ENST00000542381 MPSTP25325 297 aa9.81□□□□□ -0.84
SRGAP1-204ENST00000542381 MAP4P27816 1152 aaKnown RBP9.81□□□□□ -0.84
SRGAP1-204ENST00000542381 MZF1P28698 734 aaPredicted RBP9.81□□□□□ -0.84
SRGAP1-204ENST00000542381 ARL4DP49703 201 aa9.81□□□□□ -0.84
SRGAP1-204ENST00000542381 VN1R5Q7Z5H4 357 aa9.81□□□□□ -0.84
SRGAP1-204ENST00000542381 EREGO14944 169 aa9.8□□□□□ -0.84
SRGAP1-204ENST00000542381 TTC16Q8NEE8 873 aa9.8□□□□□ -0.84
SRGAP1-204ENST00000542381 BSNDQ8WZ55 320 aa9.8□□□□□ -0.84
SRGAP1-204ENST00000542381 PMEPA1Q969W9 287 aa9.8□□□□□ -0.84
SRGAP1-204ENST00000542381 POLIQ9UNA4 740 aa9.8□□□□□ -0.84
SRGAP1-204ENST00000542381 RNF114Q9Y508 228 aa9.8□□□□□ -0.84
SRGAP1-204ENST00000542381 DLGAP3O95886 979 aa9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 MTMR3Q13615 1198 aa9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 IKBKEQ14164 716 aa9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 NUTM2GQ5VZR2 741 aa9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 SHISA5Q8N114 240 aa9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 FBXL6Q8N531 539 aa9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 C12orf50Q8NA57 414 aaPredicted RBP9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 GTF3C2Q8WUA4 911 aaPredicted RBP9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 USP26Q9BXU7 913 aa9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 TMPRSS13Q9BYE2 586 aa9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
SRGAP1-204ENST00000542381 RXRBP28702 533 aa9.78□□□□□ -0.84
SRGAP1-204ENST00000542381 PIM2Q9P1W9 311 aa9.78□□□□□ -0.84
SRGAP1-204ENST00000542381 LOC100289279A0A1B0GTE1 492 aa9.77□□□□□ -0.85
SRGAP1-204ENST00000542381 F13BP05160 661 aa9.77□□□□□ -0.85
SRGAP1-204ENST00000542381 SMG8Q8ND04 991 aaKnown RBP9.77□□□□□ -0.85
SRGAP1-204ENST00000542381 ADGRE2Q9UHX3 823 aa9.77□□□□□ -0.85
SRGAP1-204ENST00000542381 TNFRSF21O75509 655 aa9.76□□□□□ -0.85
SRGAP1-204ENST00000542381 TIAF1O95411 115 aa9.76□□□□□ -0.85
SRGAP1-204ENST00000542381 DRD2P14416 443 aa9.76□□□□□ -0.85
SRGAP1-204ENST00000542381 ASAP3Q8TDY4 903 aa9.76□□□□□ -0.85
SRGAP1-204ENST00000542381 CCDC97Q96F63 343 aaPredicted RBP9.76□□□□□ -0.85
SRGAP1-204ENST00000542381 ATG3Q9NT62 314 aa9.76□□□□□ -0.85
SRGAP1-204ENST00000542381 FOXD3Q9UJU5 478 aaPredicted RBP9.76□□□□□ -0.85
SRGAP1-204ENST00000542381 KRTAP4-8A0A0G2JLE6 195 aa9.75□□□□□ -0.85
SRGAP1-204ENST00000542381 PHACTR2O75167 634 aa9.75□□□□□ -0.85
SRGAP1-204ENST00000542381 SUGCTQ9HAC7 445 aa9.75□□□□□ -0.85
SRGAP1-204ENST00000542381 LATS2Q9NRM7 1088 aa9.75□□□□□ -0.85
SRGAP1-204ENST00000542381 LEMD3Q9Y2U8 911 aa9.75□□□□□ -0.85
SRGAP1-204ENST00000542381 ESRRAP11474 423 aaPredicted RBP9.74□□□□□ -0.85
SRGAP1-204ENST00000542381 CDPF1Q6NVV7 123 aa9.74□□□□□ -0.85
SRGAP1-204ENST00000542381 CYP4F12Q9HCS2 524 aa9.74□□□□□ -0.85
SRGAP1-204ENST00000542381 EDN3P14138 238 aa9.73□□□□□ -0.85
SRGAP1-204ENST00000542381 AAMPQ13685 434 aa9.73□□□□□ -0.85
SRGAP1-204ENST00000542381 NFKBIBQ15653 356 aa9.73□□□□□ -0.85
SRGAP1-204ENST00000542381 PEAR1Q5VY43 1037 aaPredicted RBP9.73□□□□□ -0.85
SRGAP1-204ENST00000542381 ABI1Q8IZP0 508 aa9.73□□□□□ -0.85
SRGAP1-204ENST00000542381 FBLIM1Q8WUP2 373 aa9.73□□□□□ -0.85
SRGAP1-204ENST00000542381 OSBPL1AQ9BXW6 950 aa9.73□□□□□ -0.85
SRGAP1-204ENST00000542381 BHLHE41Q9C0J9 482 aaPredicted RBP9.73□□□□□ -0.85
SRGAP1-204ENST00000542381 SERPINA10Q9UK55 444 aa9.73□□□□□ -0.85
SRGAP1-204ENST00000542381 FAM95CA0A1B0GW59 222 aa9.72□□□□□ -0.85
SRGAP1-204ENST00000542381 YBX3P16989 372 aaKnown RBP eCLIP9.72□□□□□ -0.85
SRGAP1-204ENST00000542381 MSMPQ1L6U9 139 aa9.72□□□□□ -0.85
SRGAP1-204ENST00000542381 EXOSC6Q5RKV6 272 aaKnown RBP9.72□□□□□ -0.85
SRGAP1-204ENST00000542381 ALKBH2Q6NS38 261 aa9.72□□□□□ -0.85
SRGAP1-204ENST00000542381 GIMAP7Q8NHV1 300 aa9.72□□□□□ -0.85
SRGAP1-204ENST00000542381 SNX29Q8TEQ0 813 aa9.72□□□□□ -0.85
SRGAP1-204ENST00000542381 SOX17Q9H6I2 414 aaPredicted RBP9.72□□□□□ -0.85
SRGAP1-204ENST00000542381 METTL12A8MUP2 240 aa9.71□□□□□ -0.86
SRGAP1-204ENST00000542381 FOSL1P15407 271 aa9.71□□□□□ -0.86
SRGAP1-204ENST00000542381 SSFA2P28290 1259 aa9.71□□□□□ -0.86
SRGAP1-204ENST00000542381 USP11P51784 963 aa9.71□□□□□ -0.86
SRGAP1-204ENST00000542381 GSTM4Q03013 218 aa9.71□□□□□ -0.86
SRGAP1-204ENST00000542381 C2CD4AQ8NCU7 369 aaPredicted RBP9.71□□□□□ -0.86
SRGAP1-204ENST00000542381 NPR3P17342 541 aa9.7□□□□□ -0.86
SRGAP1-204ENST00000542381 ADMP35318 185 aa9.7□□□□□ -0.86
SRGAP1-204ENST00000542381 PAOXQ6QHF9 649 aa9.7□□□□□ -0.86
SRGAP1-204ENST00000542381 TMEM88BA6NKF7 163 aa9.69□□□□□ -0.86
SRGAP1-204ENST00000542381 FZD6O60353 706 aa9.69□□□□□ -0.86
SRGAP1-204ENST00000542381 NFXL1Q6ZNB6 911 aa9.69□□□□□ -0.86
SRGAP1-204ENST00000542381 CCDC39Q9UFE4 941 aa9.69□□□□□ -0.86
SRGAP1-204ENST00000542381 ANGEL1Q9UNK9 670 aaKnown RBP9.69□□□□□ -0.86
SRGAP1-204ENST00000542381 ARID3CA6NKF2 412 aa9.68□□□□□ -0.86
SRGAP1-204ENST00000542381 POLR3DP05423 398 aaPredicted RBP9.68□□□□□ -0.86
SRGAP1-204ENST00000542381 SOX4Q06945 474 aaPredicted RBP9.68□□□□□ -0.86
SRGAP1-204ENST00000542381 NRSN2Q9GZP1 204 aa9.68□□□□□ -0.86
SRGAP1-204ENST00000542381 AMOTL2Q9Y2J4 779 aa9.68□□□□□ -0.86
SRGAP1-204ENST00000542381 EHHADHQ08426 723 aa9.67□□□□□ -0.86
SRGAP1-204ENST00000542381 TBC1D32Q96NH3 1257 aa9.67□□□□□ -0.86
SRGAP1-204ENST00000542381 ZFYVE28Q9HCC9 887 aa9.67□□□□□ -0.86
SRGAP1-204ENST00000542381 CCDC87Q9NVE4 849 aa9.67□□□□□ -0.86
SRGAP1-204ENST00000542381 PRKAG2Q9UGJ0 569 aa9.67□□□□□ -0.86
SRGAP1-204ENST00000542381 FAM13AO94988 1023 aa9.66□□□□□ -0.86
SRGAP1-204ENST00000542381 CPSF6Q16630 551 aaKnown RBP eCLIP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms