RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	IL1R1	P14778	569 aa		11.33	□□□□□ -0.6
POLE-218	ENST00000542362	CHAF1A	Q13111	956 aa	Predicted RBP	11.33	□□□□□ -0.6
POLE-218	ENST00000542362	POLA2	Q14181	598 aa		11.33	□□□□□ -0.6
POLE-218	ENST00000542362	KIF4B	Q2VIQ3	1234 aa		11.33	□□□□□ -0.6
POLE-218	ENST00000542362	TTLL5	Q6EMB2	1281 aa		11.33	□□□□□ -0.6
POLE-218	ENST00000542362	CEP85	Q6P2H3	762 aa		11.33	□□□□□ -0.6
POLE-218	ENST00000542362	PODN	Q7Z5L7	613 aa		11.33	□□□□□ -0.6
POLE-218	ENST00000542362	SIRT2	Q8IXJ6	389 aa		11.33	□□□□□ -0.6
POLE-218	ENST00000542362	PHKA1	P46020	1223 aa		11.32	□□□□□ -0.6
POLE-218	ENST00000542362	TIMM10	P62072	90 aa		11.32	□□□□□ -0.6
POLE-218	ENST00000542362	ATP8B2	P98198	1209 aa		11.32	□□□□□ -0.6
POLE-218	ENST00000542362	ATP2B3	Q16720	1220 aa		11.32	□□□□□ -0.6
POLE-218	ENST00000542362	NBPF9	Q3BBW0	867 aa		11.32	□□□□□ -0.6
POLE-218	ENST00000542362	ZNF804A	Q7Z570	1209 aa		11.32	□□□□□ -0.6
POLE-218	ENST00000542362	FBXO33	Q7Z6M2	555 aa		11.32	□□□□□ -0.6
POLE-218	ENST00000542362	CNTROB	Q8N137	903 aa		11.32	□□□□□ -0.6
POLE-218	ENST00000542362	TDRD7	Q8NHU6	1098 aa	Known RBP	11.32	□□□□□ -0.6
POLE-218	ENST00000542362	SIPA1L1	O43166	1804 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362	ATAD5	Q96QE3	1844 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362		H7C1D1	291 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362	CIAO1	O76071	339 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362	HIBADH	P31937	336 aa	Known RBP	11.31	□□□□□ -0.6
POLE-218	ENST00000542362	RRP1	P56182	461 aa	Known RBP	11.31	□□□□□ -0.6
POLE-218	ENST00000542362	PUM3	Q15397	648 aa	Known RBP	11.31	□□□□□ -0.6
POLE-218	ENST00000542362	STRIP1	Q5VSL9	837 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362	PI16	Q6UXB8	463 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362	USP50	Q70EL3	339 aa	Predicted RBP	11.31	□□□□□ -0.6
POLE-218	ENST00000542362	SSH3	Q8TE77	659 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362	DPF2	Q92785	391 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362	TLR7	Q9NYK1	1049 aa	Known RBP	11.31	□□□□□ -0.6
POLE-218	ENST00000542362	GGA3	Q9NZ52	723 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362	EXOC6B	Q9Y2D4	811 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362	THSD7B	Q9C0I4	1608 aa		11.31	□□□□□ -0.6
POLE-218	ENST00000542362		A0A1B0GUL7	405 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	SLC5A1	P13866	664 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	RPS12	P25398	132 aa	Known RBP	11.3	□□□□□ -0.6
POLE-218	ENST00000542362	ZNF280A	P59817	542 aa	Predicted RBP	11.3	□□□□□ -0.6
POLE-218	ENST00000542362	PRAMEF18	Q5VWM3	479 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	USP48	Q86UV5	1035 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	PNMA8A	Q86V59	439 aa	Predicted RBP	11.3	□□□□□ -0.6
POLE-218	ENST00000542362	AGBL3	Q8NEM8	1001 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	CRBN	Q96SW2	442 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	BCL11A	Q9H165	835 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	MYOZ2	Q9NPC6	264 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	ZBTB40	Q9NUA8	1239 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	CEP126	Q9P2H0	1117 aa		11.3	□□□□□ -0.6
POLE-218	ENST00000542362	MYH1	P12882	1939 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	LAMB1	P07942	1786 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	APBB1	O00213	710 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	USP17L8	P0C7I0	530 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	IL15	P40933	162 aa	Predicted RBP	11.29	□□□□□ -0.6
POLE-218	ENST00000542362	SCARF1	Q14162	830 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	ANGEL2	Q5VTE6	544 aa	Known RBP	11.29	□□□□□ -0.6
POLE-218	ENST00000542362	LPIN2	Q92539	896 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	XAGE2	Q96GT9	111 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	ZNF408	Q9H9D4	720 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	FZD1	Q9UP38	647 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	FAM205A	Q6ZU69	1335 aa		11.29	□□□□□ -0.6
POLE-218	ENST00000542362	SSC5D	A1L4H1	1573 aa		11.28	□□□□□ -0.6
POLE-218	ENST00000542362	CLRN2	A0PK11	232 aa		11.28	□□□□□ -0.6
POLE-218	ENST00000542362	WNT10B	O00744	389 aa		11.28	□□□□□ -0.6
POLE-218	ENST00000542362	SURF6	O75683	361 aa	Known RBP	11.28	□□□□□ -0.6
POLE-218	ENST00000542362	IFIT1	P09914	478 aa	Known RBP	11.28	□□□□□ -0.6
POLE-218	ENST00000542362	HSPA1A	P0DMV8	641 aa	Known RBP	11.28	□□□□□ -0.6
POLE-218	ENST00000542362	HSPA1B	P0DMV9	641 aa	Known RBP	11.28	□□□□□ -0.6
POLE-218	ENST00000542362	MFSD14B	Q5SR56	506 aa		11.28	□□□□□ -0.6
POLE-218	ENST00000542362	CST9	Q5W186	159 aa		11.28	□□□□□ -0.6
POLE-218	ENST00000542362	DBNDD2	Q9BQY9	259 aa		11.28	□□□□□ -0.6
POLE-218	ENST00000542362	MKRN1	Q9UHC7	482 aa	Known RBP	11.28	□□□□□ -0.6
POLE-218	ENST00000542362	PGAP2	Q9UHJ9	254 aa		11.28	□□□□□ -0.6
POLE-218	ENST00000542362	DDX19B	Q9UMR2	479 aa		11.28	□□□□□ -0.6
POLE-218	ENST00000542362	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.28	□□□□□ -0.6
POLE-218	ENST00000542362	PRDX5	P30044	214 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	IRX6	P78412	446 aa	Predicted RBP	11.27	□□□□□ -0.61
POLE-218	ENST00000542362	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
POLE-218	ENST00000542362	CFAP100	Q494V2	611 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	CCDC102B	Q68D86	513 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	MOB2	Q70IA6	237 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	VPS37D	Q86XT2	251 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	CDAN1	Q8IWY9	1227 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	ZBED3	Q96IU2	234 aa	Predicted RBP	11.27	□□□□□ -0.61
POLE-218	ENST00000542362	PRMT6	Q96LA8	375 aa	Predicted RBP	11.27	□□□□□ -0.61
POLE-218	ENST00000542362	NEUROD6	Q96NK8	337 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.27	□□□□□ -0.61
POLE-218	ENST00000542362	IL1RAPL2	Q9NP60	686 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	TTF2	Q9UNY4	1162 aa	Known RBP	11.27	□□□□□ -0.61
POLE-218	ENST00000542362	NDUFB9	Q9Y6M9	179 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	NAV1	Q8NEY1	1877 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	MYH8	P13535	1937 aa		11.27	□□□□□ -0.61
POLE-218	ENST00000542362	FRAT2	O75474	233 aa	Predicted RBP	11.26	□□□□□ -0.61
POLE-218	ENST00000542362	OS9	Q13438	667 aa	Predicted RBP	11.26	□□□□□ -0.61
POLE-218	ENST00000542362	RASGRF1	Q13972	1273 aa		11.26	□□□□□ -0.61
POLE-218	ENST00000542362	PDE3A	Q14432	1141 aa		11.26	□□□□□ -0.61
POLE-218	ENST00000542362	TNNI3K	Q59H18	835 aa		11.26	□□□□□ -0.61
POLE-218	ENST00000542362	CAVIN4	Q5BKX8	364 aa		11.26	□□□□□ -0.61
POLE-218	ENST00000542362	KRT26	Q7Z3Y9	468 aa		11.26	□□□□□ -0.61
POLE-218	ENST00000542362	FBXO3	Q9UK99	471 aa		11.26	□□□□□ -0.61
POLE-218	ENST00000542362	FPGT-TNNI3K	V9GXZ4	949 aa		11.26	□□□□□ -0.61
POLE-218	ENST00000542362	MYO3B	Q8WXR4	1341 aa		11.26	□□□□□ -0.61
POLE-218	ENST00000542362	SMARCA5	O60264	1052 aa	Predicted RBP	11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms