RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 HSP90AA1P07900 732 aaKnown RBP13.2□□□□□ -0.3
SCG3-202ENST00000542355 KLRK1P26718 216 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 KCNB2Q92953 911 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 GNL3LQ9NVN8 582 aaKnown RBP13.2□□□□□ -0.3
SCG3-202ENST00000542355 ADD2P35612 726 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 ADCK5Q3MIX3 580 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 VPS53Q5VIR6 699 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 RNF20Q5VTR2 975 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 ZSCAN25Q6NSZ9 544 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 APPBP2Q92624 585 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 BRIP1Q9BX63 1249 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
SCG3-202ENST00000542355 TNRC6CQ9HCJ0 1690 aaKnown RBP13.19□□□□□ -0.3
SCG3-202ENST00000542355 ZNF804BA4D1E1 1349 aa13.19□□□□□ -0.3
SCG3-202ENST00000542355 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
SCG3-202ENST00000542355 KLRG2A4D1S0 409 aaPredicted RBP13.19□□□□□ -0.3
SCG3-202ENST00000542355 HSPD1P10809 573 aaKnown RBP13.19□□□□□ -0.3
SCG3-202ENST00000542355 BAG6P46379 1132 aa13.19□□□□□ -0.3
SCG3-202ENST00000542355 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
SCG3-202ENST00000542355 SPEF2Q9C093 1822 aa13.19□□□□□ -0.3
SCG3-202ENST00000542355 CPA1P15085 419 aa13.18□□□□□ -0.3
SCG3-202ENST00000542355 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
SCG3-202ENST00000542355 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
SCG3-202ENST00000542355 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
SCG3-202ENST00000542355 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
SCG3-202ENST00000542355 BBOX1O75936 387 aa13.18□□□□□ -0.3
SCG3-202ENST00000542355 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
SCG3-202ENST00000542355 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
SCG3-202ENST00000542355 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
SCG3-202ENST00000542355 FBXO33Q7Z6M2 555 aa13.18□□□□□ -0.3
SCG3-202ENST00000542355 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
SCG3-202ENST00000542355 ZNF532Q9HCE3 1301 aa13.18□□□□□ -0.3
SCG3-202ENST00000542355 PDE6AP16499 860 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 HIBADHP31937 336 aaKnown RBP13.17□□□□□ -0.3
SCG3-202ENST00000542355 MCM2P49736 904 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 TXNRD3Q86VQ6 643 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 LRP2BPQ9P2M1 347 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
SCG3-202ENST00000542355 TAF6LQ9Y6J9 622 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 MAGEB6Q8N7X4 407 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 ABCF2Q9UG63 623 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 LEMD3Q9Y2U8 911 aa13.17□□□□□ -0.3
SCG3-202ENST00000542355 GPAA1O43292 621 aa13.16□□□□□ -0.3
SCG3-202ENST00000542355 CYP21A2P08686 494 aa13.16□□□□□ -0.3
SCG3-202ENST00000542355 GPSM2P81274 684 aa13.16□□□□□ -0.3
SCG3-202ENST00000542355 KCTD17Q8N5Z5 321 aa13.16□□□□□ -0.3
SCG3-202ENST00000542355 TM6SF1Q9BZW5 370 aa13.16□□□□□ -0.3
SCG3-202ENST00000542355 ZSWIM6Q9HCJ5 1215 aa13.16□□□□□ -0.3
SCG3-202ENST00000542355 DENND2AQ9ULE3 1009 aa13.16□□□□□ -0.3
SCG3-202ENST00000542355 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
SCG3-202ENST00000542355 XDHP47989 1333 aa13.16□□□□□ -0.3
SCG3-202ENST00000542355 TCRBV5S4A2TA0A5A2 114 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 SRGNP10124 158 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 PSMA5P28066 241 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 PDE6BP35913 854 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 RUFY3Q7L099 469 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 TMX3Q96JJ7 454 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 TTC14Q96N46 770 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 TSGA10IPQ3SY00 556 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 GPR101Q96P66 508 aaPredicted RBP13.15□□□□□ -0.3
SCG3-202ENST00000542355 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 AKAP11Q9UKA4 1901 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 CASZ1Q86V15 1759 aa13.15□□□□□ -0.3
SCG3-202ENST00000542355 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
SCG3-202ENST00000542355 LARP6Q9BRS8 491 aaKnown RBP13.14□□□□□ -0.31
SCG3-202ENST00000542355 PDGFDQ9GZP0 370 aaPredicted RBP13.14□□□□□ -0.31
SCG3-202ENST00000542355 ARAP2Q8WZ64 1704 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 A0A0G2JLW4 131 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 PPEF1O14829 653 aaPredicted RBP13.14□□□□□ -0.31
SCG3-202ENST00000542355 SEMA3EO15041 775 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 FOXP2O15409 715 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 UFL1O94874 794 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 FGAP02671 866 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 NPR1P16066 1061 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
SCG3-202ENST00000542355 AK2P54819 239 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 KRT32Q14532 448 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 KCNV2Q8TDN2 545 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 AIDAQ96BJ3 306 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 CHMP5Q9NZZ3 219 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 RAI14Q9P0K7 980 aa13.14□□□□□ -0.31
SCG3-202ENST00000542355 RGPD3A6NKT7 1758 aaPredicted RBP13.13□□□□□ -0.31
SCG3-202ENST00000542355 RGPD4Q7Z3J3 1758 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 CHAF1AQ13111 956 aaPredicted RBP13.13□□□□□ -0.31
SCG3-202ENST00000542355 BLOC1S2Q6QNY1 142 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 GGA1Q9UJY5 639 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 RPAP1Q9BWH6 1393 aaPredicted RBP13.13□□□□□ -0.31
SCG3-202ENST00000542355 APPP05067 770 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 ALDH1B1P30837 517 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 DDIT3P35638 169 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
SCG3-202ENST00000542355 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 MASTLQ96GX5 879 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms