RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 DHTKD1Q96HY7 919 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 RBM17Q96I25 401 aaKnown RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 TCHPQ9BT92 498 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 IRX2Q9BZI1 471 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 TRIM4Q9C037 500 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 BHMT2Q9H2M3 363 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 MMADHCQ9H3L0 296 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 L2HGDHQ9H9P8 463 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 PDRG1Q9NUG6 133 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 DKK3Q9UBP4 350 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 DDX25Q9UHL0 483 aaKnown RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 FAN1Q9Y2M0 1017 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 ATP6V0A2Q9Y487 856 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 EVC2Q86UK5 1308 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 CC2D2AQ9P2K1 1620 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 GOLGA6L7A0A1B0GV03 622 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 GOLGA8AA7E2F4 631 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 EFCAB8A8MWE9 144 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 ABLIM1O14639 778 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 CREB3O43889 395 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 KDM1AO60341 852 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 ZBED4O75132 1171 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 KIAA0754O94854 1291 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 TRIM37O94972 964 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 LUC7L3O95232 432 aaKnown RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 CYP2E1P05181 493 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 CASTP20810 708 aaKnown RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 GBP2P32456 591 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 EIF2B5Q13144 721 aaKnown RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 CUL3Q13618 768 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 BRD3Q15059 726 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 INF2Q27J81 1249 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 PARP10Q53GL7 1025 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 C6orf132Q5T0Z8 1188 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 CCDC183Q5T5S1 534 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 MTHFD1LQ6UB35 978 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 ARMC9Q7Z3E5 817 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 LCA5Q86VQ0 697 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 REXO1L1PQ8IX06 675 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 GPR161Q8N6U8 529 aaKnown RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 SMYD1Q8NB12 490 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 OR8K1Q8NGG5 319 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 TBC1D5Q92609 795 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 ZKSCAN4Q969J2 545 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 PPP2R3CQ969Q6 453 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 CCDC47Q96A33 483 aaKnown RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 ZFRQ96KR1 1074 aaKnown RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 SPATA32Q96LK8 384 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 MOV10L1Q9BXT6 1211 aaKnown RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 GBP3Q9H0R5 595 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 KIF9Q9HAQ2 790 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 GPCPD1Q9NPB8 672 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 ZNHIT6Q9NWK9 470 aaKnown RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 ZNF215Q9UL58 517 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 PAIP2BQ9ULR5 123 aaKnown RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 CORO1CQ9ULV4 474 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 SUGT1Q9Y2Z0 365 aa5.93□□□□□ -1.46
SNHG1-218ENST00000541615 POLR1AO95602 1720 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-218ENST00000541615 CCDC18Q5T9S5 1454 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 GOLGA6L4A6NEF3 574 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 MTRF1O75570 445 aaKnown RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 FCHSD2O94868 740 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 FSBPO95073 299 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 CDC25BP30305 580 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 RANBP1P43487 201 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 KCNJ6P48051 423 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 BCAMP50895 628 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 PAPOLAP51003 745 aaKnown RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 SMTNP53814 917 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 ST5P78524 1137 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 KCNA1Q09470 495 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 NAA25Q14CX7 972 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 ELF2Q15723 593 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 SEPT7Q16181 437 aaKnown RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 CNGA3Q16281 694 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 USH1GQ495M9 461 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 CAPRIN2Q6IMN6 1127 aaKnown RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 YTHDF3Q7Z739 585 aaKnown RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 UBE2Q1Q7Z7E8 422 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 DZIP1Q86YF9 867 aaKnown RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 PEX5LQ8IYB4 626 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 VPS37AQ8NEZ2 397 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 TRIM58Q8NG06 486 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 FAM71BQ8TC56 605 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 CCHCR1Q8TD31 782 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 HNRNPLLQ8WVV9 542 aaKnown RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 RTF1Q92541 710 aaKnown RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 SPDL1Q96EA4 605 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 DHRS1Q96LJ7 313 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 SH3GL1Q99961 368 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 TSGA10Q9BZW7 698 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 LRRCC1Q9C099 1032 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 NACA2Q9H009 215 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 RSPH9Q9H1X1 276 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-218ENST00000541615 KIAA1468Q9P260 1216 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 CIDEBQ9UHD4 219 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 GGA2Q9UJY4 613 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 DAAM1Q9Y4D1 1078 aa5.92□□□□□ -1.46
SNHG1-218ENST00000541615 IKBKGQ9Y6K9 419 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms