RNA–Protein interactions for RNA: ENST00000541614.5

LRTOMT-218, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-218ENST00000541614 RCAN3Q9UKA8 241 aa7.8□□□□□ -1.16
LRTOMT-218ENST00000541614 HDAC9Q9UKV0 1011 aa7.8□□□□□ -1.16
LRTOMT-218ENST00000541614 PA2G4Q9UQ80 394 aaKnown RBP7.8□□□□□ -1.16
LRTOMT-218ENST00000541614 PCNTO95613 3336 aa7.8□□□□□ -1.16
LRTOMT-218ENST00000541614 CNTNAP1P78357 1384 aa7.8□□□□□ -1.16
LRTOMT-218ENST00000541614 PITPNM2Q9BZ72 1349 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 THSD7BQ9C0I4 1608 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 RASSF10A6NK89 507 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 ZBTB7BO15156 539 aaPredicted RBP7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 SLC5A1P13866 664 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 FMR1Q06787 632 aaKnown RBP eCLIP7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 SCARF1Q14162 830 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 ATP2B3Q16720 1220 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 VPS37DQ86XT2 251 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 KIAA0825Q8IV33 1275 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 JMYQ8N9B5 988 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 DCPSQ96C86 337 aaKnown RBP7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 ZBED3Q96IU2 234 aaPredicted RBP7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 CEP126Q9P2H0 1117 aa7.79□□□□□ -1.16
LRTOMT-218ENST00000541614 ASTN2O75129 1339 aaPredicted RBP7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 PNMA6EA0A0J9YXQ4 647 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 ADM5C9JUS6 153 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 WNT10BO00744 389 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 ZBTB22O15209 634 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 POLA2Q14181 598 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 NBPF9Q3BBW0 867 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 MFSD14BQ5SR56 506 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 ANGEL2Q5VTE6 544 aaKnown RBP7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 CST9Q5W186 159 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 KRT26Q7Z3Y9 468 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 USP48Q86UV5 1035 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 SULF1Q8IWU6 871 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 MTMR14Q8NCE2 650 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 PANK1Q8TE04 598 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 SSH3Q8TE77 659 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 TBC1D22AQ8WUA7 517 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 MKRN1Q9UHC7 482 aaKnown RBP7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 JAG2Q9Y219 1238 aa7.78□□□□□ -1.16
LRTOMT-218ENST00000541614 COL1A1P02452 1464 aaPredicted RBP7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 FRAT2O75474 233 aaPredicted RBP7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 CELF2O95319 508 aaKnown RBP7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 BCAMP50895 628 aa7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 ATP8B2P98198 1209 aa7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 MVPQ14764 893 aaKnown RBP7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 DLGAP5Q15398 846 aa7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 C1orf115Q9H7X2 142 aa7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 ABT1Q9ULW3 272 aaKnown RBP7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 IQSEC3Q9UPP2 1182 aaPredicted RBP7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 AKAP2Q9Y2D5 859 aa7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 TLL2Q9Y6L7 1015 aa7.77□□□□□ -1.17
LRTOMT-218ENST00000541614 PAPPA2Q9BXP8 1791 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 A0A1B0GUL7 405 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 SPDYE2BA6NHP3 402 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 F8W031 263 aaPredicted RBP7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 SEMA3EO15041 775 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 SPDYE6P0CI01 402 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 TFCP2Q12800 502 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 CHAF1AQ13111 956 aaPredicted RBP7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 G3BP1Q13283 466 aaKnown RBP eCLIP7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 PDE3AQ14432 1141 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 DEFB115Q30KQ5 88 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 CFAP100Q494V2 611 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 CEP85Q6P2H3 762 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 DLK2Q6UY11 383 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 SAPCD2Q86UD0 394 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 APOBEC3FQ8IUX4 373 aaKnown RBP7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 CDCA5Q96FF9 252 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 HHIPL1Q96JK4 782 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 ZNF408Q9H9D4 720 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 GNL3LQ9NVN8 582 aaKnown RBP7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 DDX19BQ9UMR2 479 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 TTF2Q9UNY4 1162 aaKnown RBP7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 SUGT1Q9Y2Z0 365 aa7.76□□□□□ -1.17
LRTOMT-218ENST00000541614 MYO1BO43795 1136 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 ADORA1P30542 326 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 ECE1P42892 770 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 PHKA1P46020 1223 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 VEGFBP49765 207 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 TIMM10P62072 90 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 HDLBPQ00341 1268 aaKnown RBP7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 GRIK5Q16478 980 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 CCDC102BQ68D86 513 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 WDR66Q8TBY9 1149 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 CHMP4BQ9H444 224 aaKnown RBP7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 GBA2Q9HCG7 927 aaPredicted RBP7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 GPR108Q9NPR9 543 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 DENND2AQ9ULE3 1009 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 COG6Q9Y2V7 657 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 NOP58Q9Y2X3 529 aaKnown RBP7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 PCDHAC2Q9Y5I4 1007 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 MAST3O60307 1309 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 PDS5AQ29RF7 1337 aaKnown RBP7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 SALL1Q9NSC2 1324 aa7.75□□□□□ -1.17
LRTOMT-218ENST00000541614 SURF6O75683 361 aaKnown RBP7.74□□□□□ -1.17
LRTOMT-218ENST00000541614 CRKP46108 304 aa7.74□□□□□ -1.17
LRTOMT-218ENST00000541614 RBM5P52756 815 aaKnown RBP eCLIP7.74□□□□□ -1.17
LRTOMT-218ENST00000541614 HUNKP57058 714 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms