RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
SUDS3-203ENST00000541591 KIF23Q02241 960 aaPredicted RBP17.69■□□□□ 0.42
SUDS3-203ENST00000541591 TTLL12Q14166 644 aaPredicted RBP17.69■□□□□ 0.42
SUDS3-203ENST00000541591 ZNF804AQ7Z570 1209 aa17.69■□□□□ 0.42
SUDS3-203ENST00000541591 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
SUDS3-203ENST00000541591 BRPF1P55201 1214 aaPredicted RBP17.68■□□□□ 0.42
SUDS3-203ENST00000541591 MKRN3Q13064 507 aaKnown RBP17.68■□□□□ 0.42
SUDS3-203ENST00000541591 UTYO14607 1347 aa17.68■□□□□ 0.42
SUDS3-203ENST00000541591 PTPRCP08575 1304 aa17.68■□□□□ 0.42
SUDS3-203ENST00000541591 LAMB1P07942 1786 aa17.67■□□□□ 0.42
SUDS3-203ENST00000541591 CLRN2A0PK11 232 aa17.67■□□□□ 0.42
SUDS3-203ENST00000541591 SLC10A3P09131 477 aa17.67■□□□□ 0.42
SUDS3-203ENST00000541591 NOGQ13253 232 aa17.67■□□□□ 0.42
SUDS3-203ENST00000541591 RASAL3Q86YV0 1011 aa17.67■□□□□ 0.42
SUDS3-203ENST00000541591 HDAC9Q9UKV0 1011 aa17.67■□□□□ 0.42
SUDS3-203ENST00000541591 IL1R1P14778 569 aa17.66■□□□□ 0.42
SUDS3-203ENST00000541591 C15orf52Q6ZUT6 534 aaKnown RBP17.66■□□□□ 0.42
SUDS3-203ENST00000541591 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
SUDS3-203ENST00000541591 SSC5DA1L4H1 1573 aa17.66■□□□□ 0.42
SUDS3-203ENST00000541591 MYH2Q9UKX2 1941 aa17.65■□□□□ 0.42
SUDS3-203ENST00000541591 RABL6Q3YEC7 729 aaPredicted RBP17.65■□□□□ 0.42
SUDS3-203ENST00000541591 CFAP100Q494V2 611 aa17.65■□□□□ 0.42
SUDS3-203ENST00000541591 METTL24Q5JXM2 366 aa17.65■□□□□ 0.42
SUDS3-203ENST00000541591 ZBED3Q96IU2 234 aaPredicted RBP17.65■□□□□ 0.42
SUDS3-203ENST00000541591 NOB1Q9ULX3 412 aaKnown RBP17.65■□□□□ 0.42
SUDS3-203ENST00000541591 RIPOR2Q9Y4F9 1068 aa17.65■□□□□ 0.42
SUDS3-203ENST00000541591 RBM5P52756 815 aaKnown RBP eCLIP17.64■□□□□ 0.41
SUDS3-203ENST00000541591 CHAF1AQ13111 956 aaPredicted RBP17.64■□□□□ 0.41
SUDS3-203ENST00000541591 DLGAP5Q15398 846 aa17.64■□□□□ 0.41
SUDS3-203ENST00000541591 GRIK5Q16478 980 aa17.64■□□□□ 0.41
SUDS3-203ENST00000541591 TRMT2AQ8IZ69 625 aaKnown RBP17.64■□□□□ 0.41
SUDS3-203ENST00000541591 VEZTQ9HBM0 779 aa17.64■□□□□ 0.41
SUDS3-203ENST00000541591 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
SUDS3-203ENST00000541591 TRPA1O75762 1119 aa17.63■□□□□ 0.41
SUDS3-203ENST00000541591 ALDH1L2Q3SY69 923 aa17.63■□□□□ 0.41
SUDS3-203ENST00000541591 CCDC102AQ96A19 550 aa17.63■□□□□ 0.41
SUDS3-203ENST00000541591 ABHD8Q96I13 439 aa17.63■□□□□ 0.41
SUDS3-203ENST00000541591 FAM84BQ96KN1 310 aaPredicted RBP17.63■□□□□ 0.41
SUDS3-203ENST00000541591 HIBADHP31937 336 aaKnown RBP17.62■□□□□ 0.41
SUDS3-203ENST00000541591 UBE4AQ14139 1066 aa17.62■□□□□ 0.41
SUDS3-203ENST00000541591 MFSD14BQ5SR56 506 aa17.62■□□□□ 0.41
SUDS3-203ENST00000541591 APOBEC3FQ8IUX4 373 aaKnown RBP17.62■□□□□ 0.41
SUDS3-203ENST00000541591 PRMT6Q96LA8 375 aaPredicted RBP17.62■□□□□ 0.41
SUDS3-203ENST00000541591 CSRNP1Q96S65 589 aa17.62■□□□□ 0.41
SUDS3-203ENST00000541591 TNNQ9UQP3 1299 aa17.62■□□□□ 0.41
SUDS3-203ENST00000541591 TDRD7Q8NHU6 1098 aaKnown RBP17.61■□□□□ 0.41
SUDS3-203ENST00000541591 SIL1Q9H173 461 aa17.61■□□□□ 0.41
SUDS3-203ENST00000541591 RNF186Q9NXI6 227 aa17.61■□□□□ 0.41
SUDS3-203ENST00000541591 ANGEL1Q9UNK9 670 aaKnown RBP17.61■□□□□ 0.41
SUDS3-203ENST00000541591 TTF2Q9UNY4 1162 aaKnown RBP17.61■□□□□ 0.41
SUDS3-203ENST00000541591 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
SUDS3-203ENST00000541591 MYO5AQ9Y4I1 1855 aaKnown RBP17.61■□□□□ 0.41
SUDS3-203ENST00000541591 SPDYE2BA6NHP3 402 aa17.6■□□□□ 0.41
SUDS3-203ENST00000541591 SPDYE6P0CI01 402 aa17.6■□□□□ 0.41
SUDS3-203ENST00000541591 NF2P35240 595 aa17.6■□□□□ 0.41
SUDS3-203ENST00000541591 PTPN12Q05209 780 aaKnown RBP17.6■□□□□ 0.41
SUDS3-203ENST00000541591 VGLL2Q8N8G2 317 aa17.6■□□□□ 0.41
SUDS3-203ENST00000541591 COL1A1P02452 1464 aaPredicted RBP17.59■□□□□ 0.41
SUDS3-203ENST00000541591 FAM205AQ6ZU69 1335 aa17.59■□□□□ 0.41
SUDS3-203ENST00000541591 CA12O43570 354 aa17.59■□□□□ 0.41
SUDS3-203ENST00000541591 RFX5P48382 616 aaPredicted RBP17.59■□□□□ 0.41
SUDS3-203ENST00000541591 BCAMP50895 628 aa17.59■□□□□ 0.41
SUDS3-203ENST00000541591 VPS37DQ86XT2 251 aa17.59■□□□□ 0.41
SUDS3-203ENST00000541591 CDAN1Q8IWY9 1227 aa17.59■□□□□ 0.41
SUDS3-203ENST00000541591 MCOLN1Q9GZU1 580 aa17.59■□□□□ 0.41
SUDS3-203ENST00000541591 DEFB129Q9H1M3 183 aa17.59■□□□□ 0.41
SUDS3-203ENST00000541591 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
SUDS3-203ENST00000541591 CCDC85CA6NKD9 419 aa17.58■□□□□ 0.4
SUDS3-203ENST00000541591 PDE8BO95263 885 aa17.58■□□□□ 0.4
SUDS3-203ENST00000541591 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.4
SUDS3-203ENST00000541591 FKBP1BP68106 108 aa17.58■□□□□ 0.4
SUDS3-203ENST00000541591 DGKZQ13574 1117 aa17.58■□□□□ 0.4
SUDS3-203ENST00000541591 TDRD3Q9H7E2 651 aaKnown RBP17.58■□□□□ 0.4
SUDS3-203ENST00000541591 PA2G4Q9UQ80 394 aaKnown RBP17.58■□□□□ 0.4
SUDS3-203ENST00000541591 DOCK2Q92608 1830 aa17.58■□□□□ 0.4
SUDS3-203ENST00000541591 FRAT2O75474 233 aaPredicted RBP17.57■□□□□ 0.4
SUDS3-203ENST00000541591 FKBP1AP62942 108 aaKnown RBP17.57■□□□□ 0.4
SUDS3-203ENST00000541591 NBPF12Q5TAG4 269 aaPredicted RBP17.57■□□□□ 0.4
SUDS3-203ENST00000541591 FBXO33Q7Z6M2 555 aa17.57■□□□□ 0.4
SUDS3-203ENST00000541591 MIER1Q8N108 512 aa17.57■□□□□ 0.4
SUDS3-203ENST00000541591 MTMR14Q8NCE2 650 aa17.57■□□□□ 0.4
SUDS3-203ENST00000541591 CLMNQ96JQ2 1002 aa17.57■□□□□ 0.4
SUDS3-203ENST00000541591 MEIS3Q99687 375 aa17.57■□□□□ 0.4
SUDS3-203ENST00000541591 ZSWIM8A7E2V4 1837 aa17.56■□□□□ 0.4
SUDS3-203ENST00000541591 MYO1BO43795 1136 aa17.56■□□□□ 0.4
SUDS3-203ENST00000541591 RARSP54136 660 aaKnown RBP17.56■□□□□ 0.4
SUDS3-203ENST00000541591 CACNB3P54284 484 aa17.56■□□□□ 0.4
SUDS3-203ENST00000541591 ARMC9Q7Z3E5 817 aa17.56■□□□□ 0.4
SUDS3-203ENST00000541591 TCP10L2B9ZVM9 353 aa17.55■□□□□ 0.4
SUDS3-203ENST00000541591 EYA2O00167 538 aa17.55■□□□□ 0.4
SUDS3-203ENST00000541591 TBC1D8O95759 1140 aa17.55■□□□□ 0.4
SUDS3-203ENST00000541591 CRKP46108 304 aa17.55■□□□□ 0.4
SUDS3-203ENST00000541591 ATG9AQ7Z3C6 839 aa17.55■□□□□ 0.4
SUDS3-203ENST00000541591 ZNF70Q9UC06 446 aaPredicted RBP17.55■□□□□ 0.4
SUDS3-203ENST00000541591 BCAR3O75815 825 aa17.54■□□□□ 0.4
SUDS3-203ENST00000541591 RASA3Q14644 834 aa17.54■□□□□ 0.4
SUDS3-203ENST00000541591 PUM3Q15397 648 aaKnown RBP17.54■□□□□ 0.4
SUDS3-203ENST00000541591 CAVIN4Q5BKX8 364 aa17.54■□□□□ 0.4
SUDS3-203ENST00000541591 API5Q9BZZ5 524 aaKnown RBP17.54■□□□□ 0.4
SUDS3-203ENST00000541591 CDK5RAP2Q96SN8 1893 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms